Developmental Proteomic Profiling of Porcine Skeletal Muscle during Postnatal Development

Kim, Nam-Kuk,Lim, Jong-Hyun,Song, Min-Jin,Kim, Oun-Hyun,Park, Beom-Young,Kim, Myung-Jick,Hwang, In-Ho,Lee, Chang-Soo Asian Australasian Association of Animal Productio 2007 Animal Bioscience Vol.20 No.10

In this study, we have compared the skeletal muscle proteome at various stages of porcine postnatal development. Korean native pigs were divided into five postnatal stages of 30, 70, 130, 170 and 300 d and their loin muscles were analyzed for muscle proteome by using two-dimensional electrophoresis and mass spectrometry. We found 5 proteins showing a consistent pattern during skeletal muscle growth. Four proteins were identified as myosin light chain 1 slow-twitch (MLC1sa) isoform, troponin T, triosephosphate isomerase (TIP) and DJ-1 protein. The remaining protein was not identified. Two muscle fiber proteins of MLC1sa isoform and troponin T showed a high expression level at an early postnatal stage and then their levels were decreased markedly during growth stages. On the other hand, the expression of TIP and DJ-1 protein, which are well known as catalysis enzyme and antioxidant-related protein, respectively, were linearly increased during growth stages. Thus, the stage-related muscle proteins may be useful as parameters for understanding the developmental characteristics of biochemical and physiological properties in Korean native pig skeletal muscle.

mtDNA Diversity and Phylogenetic State of Korean Cattle Breed, Chikso

Kim, Jae-Hwan,Byun, Mi Jeong,Kim, Myung-Jick,Suh, Sang Won,Ko, Yeoung-Gyu,Lee, Chang Woo,Jung, Kyoung-Sub,Kim, Eun Sung,Yu, Dae Jung,Kim, Woo Hyun,Choi, Seong-Bok Asian Australasian Association of Animal Productio 2013 Animal Bioscience Vol.26 No.2

In order to analyze the genetic diversity and phylogenetic status of the Korean Chikso breed, we determined sequences of mtDNA cytochrome b (cyt b) gene and performed phylogenetic analysis using 239 individuals from 5 Chikso populations. Five non-synonymous mutations of a total of 15 polymorphic sites were identified among 239 cyt b coding sequences. Thirteen haplotypes were defined, and haplotype diversity was 0.4709 ranging from 0.2577 to 0.6114. Thirty-five haplotypes (C1-C35) were classified among 9 Asia and 3 European breeds. C2 was a major haplotype that contained 206 sequences (64.6%) from all breeds used. C3-C13 haplotypes were Chikso-specific haplotypes. C1 and C2 haplotypes contained 80.5% of cyt b sequences of Hanwoo, Yanbian, Zaosheng and JB breeds. In phylogenetic analyses, the Chikso breed was contained into B. taurus lineage and was genetically more closely related to two Chinese breeds than to Korean brown cattle, Hanwoo. These results suggest that Chikso and Hanwoo have a genetic difference based on the mtDNA cyt b gene as well as their coat color, sufficient for classification as a separate breed.

Quality Characteristics and Composition of the Longissimus Muscle from Entire and Castrate Elk in Korea

Kim, Sang-Woo,Kim, Kwan-Woo,Park, Seong-Bok,Kim, Myung-Jick,Yim, Dong-Gyun Asian Australasian Association of Animal Productio 2016 Animal Bioscience Vol.29 No.5

The objective of the research was to determine the chemical composition as well as the physicochemical properties of the longissimus muscle from Korean entire and castrate elk. Twelve elk stags were raised and fed on concentrate with ad libitum hay. All animals were equally divided into castrated and non-castrated (entire) males, and slaughtered at 5 year of age. It was found that entire elk, in comparison with castrate elk, had higher content of moisture and lower content of fat (p<0.05). Compared with entire males, the castrates had lower pH and shear force values (p<0.05). However, castrates had higher $L^*$, $a^*$, and $b^*$ values compared with entires (p<0.05). An analysis of the fatty acid profile revealed that the muscles of entire and castrate elk had the most abundant concentrations of the following fatty acids: palmitic acid (C16:0) of the saturated fatty acid, and oleic acid (C18:1n-9) of the unsaturated fatty acid. The entire elk contains higher proportions of linoleic acid (C18:3n6), eicosenoic acid (C20:1n9), and arachidonic acid (C20:4n6) (p<0.05). Cholesterol content in elk was not affected by castration. The predominant free amino acid was glutamic acid related to umami taste. It is apparent that the castrate animals carried higher content of histidine, isoleucine, and leucine than those of the entire group (p<0.05). In this study, it was concluded that venison quality of elk is affected by castration and these results can provide fundamental information for venison production.

The effect of castration time on growth and carcass production of elk bulls

Kim, Sang-Woo,Kim, Kwan-Woo,Park, Seong-Bok,Kim, Myung-Jick,Yim, Dong-Gyun Korean Society of Animal Science and Technology 2015 한국축산학회지 Vol.57 No.11

The effects of castration time on growth and carcass traits of elk bulls were investigated. Twelve bulls at 5 years old were raised and fed on concentrate with ad libitum hay. All animals were allocated randomly to each of four treatment groups (3 heads/group). Groups of each treatment were castrated surgically in March, April or June and managed together with non-castration (entire) treatment. All elk bulls in the trial were slaughtered at same time. Growth parameters, carcass yield and composition were recorded. The total gain and average daily gain was higher when castrated in April (p < 0.05). The entire elk produced heaviest and highest in saddle and brisket portions (p < 0.05). It is apparent that the castrate animals carried more total fat weight and percentages than the entire males (p < 0.05). It was found that loin muscles from non-castrated elk, in comparison with those from castrated one, had higher content of moisture and lower content of fat (p < 0.05). In this study, growth parameters, carcass yields and chemical composition were greatly affected by castration time.

mtDNA cytochrome b에 기초한 한국흑우의 계통유전학적 분석

Jae-Hwan Kim(김재환),Mi Jung Byun(변미정),Myung-Jick Kim(김명직),Sang Won Suh(서상원),Young-Sin Kim(김영신),Yeoung-Gyu Ko(고응규),Sung Woo Kim(김성우),Kyoung-Sub Jung(정경섭),Dong-Hun Kim(김동훈),Seong-Bok Choi(최성복) 한국생명과학회 2013 생명과학회지 Vol.23 No.1

본 연구는 mtDNA cytochrome b(Cyt b) 유전자 서열을 토대로 한국흑우의 유전적 다양성 및 계통유전학적 위치를 파악하기 위하여 실시하였다. 한국흑우 38두로부터 결정된 mtDNA Cyt b유전자 전체서열 내에서 염기삽입 및 결실 없이 1개의 silent mutation이 동정되었다. 또한 2개의 haplotype으로 분류되었고, 염기변이율 및 haplotype 다양성지수에 기초한 한국흑우의 유전적 다양성은 기존에 보고된 중국 품종에 비해 낮게 나타났다. 한국, 일본, 중국에 분포하고 있는 12품종 101개 서열을 수집하여 한국흑우와의 유연관계를 확인하였다. 한국흑우에서 분류된 2개의 haplotype은 모두 B. taurus계열에 포함되었으며, 한우, 일본흑우, Yanbian, Zaosheng 등 4개 품종과 하나의 그룹을 형성하였다. 또한 품종별 D xy유전거리 산출 결과, 한국흑우는 한우 및 일본흑우에 비해서 중국의 Yanbian, Zaosheng 품종과 더 가까운 유연관계를 보였다. 본 연구의 결과는 가축유전자원으로서 한국흑우의 보존 및 유전적 특성 구명을 위한 중요한 자료로 활용이 가능할 것으로 사료된다. The purpose of this study was to identify genetic polymorphisms of the mitochondrial cytochrome b (mtDNA cyt b) gene in Korean black (KB) cattle breed and to analyze the genetic relationship between the KB and other breeds. We determined the complete sequence of the mtDNA cyt bgene in 38 KB cattle. We also analyzed their genetic diversity, and phylogenetic analysis was performed by comparison with Korean cattle (KC, called Hanwoo) and breeds from China and Japan. A nucleotide substitution was detected in the KB cattle, and two haplotypes were defined. In the neighbor-joining (NJ) tree, the haplotypes of KB were located in Bos taurus lineage with those of KC, Japanese black (JB), Yanbian and Zaosheng breeds. However, the haplotypes of Chinese breeds, excluding Yanbian and Zaosheng, were separated into B. taurusand B. indicus lineages. In the NJ tree of breeds based on D xygenetic distances, Chinese breeds mixed with B. taurus and B. indicus lineages were located between B. indicus and B. taurus lineages. KB was contained within B. taurus lineage and was determined to be genetically more closely related to two Chinese (Yanbian and Zaosheng) breeds than to KC and JB. The haplotype distribution and the results of the phylogenetic analysis suggest that KB and KC have genetic differences in their mtDNA cyt b gene sequences.

간이식술시 나타나는 Post-Reperfusion Syndrome의 발현기전에 관한 실험적 연구

김승직(Seung Jick Kim),왕희정(Hee Jung Wang),백계형(Kye Hyeong Paik),김명호(Myung Ho Kim),이혁상(Hyucksang Lee),우성(Sung Woo),박성섭(Sung Sub Park),백낙환(Nak Whan Paik) 대한외과학회 1994 Annals of Surgical Treatment and Research Vol.46 No.3

간헐적 정수압이 세포의 부착에 미치는 영향성 평가

김영직(Young Jick Kim),이명곤(Myung-Kon Lee),박수아(Su A Park),신호준(Ho Joon Shin),김인애(In Ae Kim),이용재(Yong Jae Lee),신지원(Ji Won Shin),신정욱(Jung-Woog Shin) 한국정밀공학회 2005 한국정밀공학회 학술발표대회 논문집 Vol.2005 No.10월

In this study, effects of IHPs with various resting times to cell adhesion were investigated through the measurements of cell adhesive force, number and area of focal contacts (stained vinculin spots), and projected cell area, perimeter and circularity. In addition correlation tests and curve estimations using the experimental results were performed for the finding an essential factor for increment of cell adhesive force. In the results, immediately after mechanical stimuli (150 minutes after seeding) and one hour later (210 minutes after seeding), the average adhesive force of experimental group 5 (resting time: 15min) compared with that of control group at same culture time was increased significantly (p<0.05). Average projected area and perimeter of cells at Group 5 were increased significantly (p<0.05), while average circularity of cells at Group 5 incubated for 210 minutes was decreased significantly (p<0.05). In the digital image analysis of focal contacts containing vinculins, area and numbers of focal contacts per cell at Group 5 were higher than those of the other groups. This study indicated that IHP with appropriate resting time could contribute in improving cell adhesive force, cell spreading, development of cytoskeleton and formation of focal contacts. And cell adhesive force was correlated to the morphological aspects of cell and development of focal contacts. Particularly, area of focal contacts was closely related to cell adhesive force.

RESEARCH : Open Access ; The effect of castration time on growth and carcass production of elk bulls

( Sang-woo Kim ),( Kwan-woo Kim ),( Seong-bok Park ),( Myung-jick Kim ),( Dong-gyun Yim ) 한국동물자원과학회(구 한국축산학회) 2015 한국축산학회지 Vol.57 No.39

The effects of castration time on growth and carcass traits of elk bulls were investigated. Twelve bulls at 5 years old were raised and fed on concentrate with ad libitum hay. All animals were allocated randomly to each of four treatment groups (3 heads/group). Groups of each treatment were castrated surgically in March, April or June and managed together with non-castration (entire) treatment. All elk bulls in the trial were slaughtered at same time. Growth parameters, carcass yield and composition were recorded. The total gain and average daily gain was higher when castrated in April (p < 0.05). The entire elk produced heaviest and highest in saddle and brisket portions (p < 0.05). It is apparent that the castrate animals carried more total fat weight and percentages than the entire males (p < 0.05). It was found that loin muscles from non-castrated elk, in comparison with those from castrated one, had higher content of moisture and lower content of fat (p < 0.05). In this study, growth parameters, carcass yields and chemical composition were greatly affected by castration time.

유전 및 육종 : 돼지 PGK 2 유전자의 단일염기다형성 및 성장 형질과의 연관성 구명

김상욱 ( Sang wook Kim ),김재영 ( Jae Young Kim ),조규호 ( Kyu Ho Cho ),이지웅 ( Ji Woong Lee ),김태현 ( Tae Hun Kim ),최봉환 ( Bong Hwan Choi ),김명직 ( Myung Jick Kim ),임다정 ( Da Jeong Lim ),장홍철 ( Hong Chul Jang ) 한국동물자원과학회(구 한국축산학회) 2011 한국축산학회지 Vol.53 No.1

자돈의 생시 체중은 자돈의 이유 체중 및 생존율에도 크게 영향을 미친다. 또한 출하 시까지 돼지의 성장률 뿐만아니라 출하 일령 단축 및 출하 체중과도 밀접한 연관성이 있는 것으로 알려져 있다. 본 연구는 돼지 7번 염색체의 PGK 2(phosphoglycerate kinase 2) 유전자의 promoter 영역 및 transcription 영역에 해당하는 DNA 염기서열을 유전체 구조분석을 통해 20개의 SNP(Single Nucleotide Polymorpism)를 발굴하였고, 발굴된 SNP 중 PGK 2 유전자의 전사 조절 영역 내 g.122 T>G 다형을 재래돼지와 Landrace를 이용한 F2 집단 268두 자돈의 성장 형질과의 연관성 분석을 실시한 결과, 생시 체중(p<0.01) 및 3주령 체중(p<0.001)에서 통계적으로 고도의 유의적 연관성이 있음을 확인 할 수 있었다. 따라서 본 연구를 통하여 확인된 PGK 2 유전자의 promoter 영역 내 성장 형질 관련 SNP는 건강한 자돈 및 종돈을 조기 선발 하기 위한 유전자 marker로 활용 가능성을 제시하였다. The purpose of this study was to analyse of association between growth traits and single nucleotide polymorphisms(SNPs) polymorphism of phosphoglycerate kinase 2(PGK 2) gene in pigs. The birth weight of piglet influences on weaning weight and survival rate that are import economic traits in pig industry. Also, these growth traits are representative factor to decrease a period getting to marketing weight as well as growth rate in pig. The PGK 2 is an isozyme that catalyzes the first ATP-generating step in the glycolytic pathwayand important enzyme related with energy metabolism. Twenty of SNPs were discoveredby genome structure analysis that compares the sequence on promoter and transcription region of PGK 2 gene in porcine chromosome 7. An association between PGK 2 SNPs and growth traits was analyzed in F2 reciprocal-crossbred population between korean native pig(KNP) and Landrace. Association analysis indicated that polymorphism of the PGK 2 gene promoter region has significant effects on weight at birth(p<0.01) and weight at 3 weeks of age(p<0.0001). These results suggest that PGK 2 gene polymorphism was associated with energy metabolism and physiological function of growth in pig.

유전 및 육종 : mtDNA Cytochrome b 유전자에 기초한 한국재래염소의 계통유전학적 분석

김재환 ( Jae Hwan Kim ),변미정 ( Mi Jeong Byun ),고응규 ( Yeoung Gyu Ko ),김성우 ( Sung Woo Kim ),김상우 ( Sang Woo Kim ),도윤정 ( Yoon Jung Do ),김명직 ( Myung Jick Kim ),윤세형 ( Sei Hyung Yoon ),최성복 ( Seong Bok Choi ) 한국동물자원과학회(구 한국축산학회) 2012 한국축산학회지 Vol.54 No.4

한국재래염소의 계통유전학적 위치를 확인하기 위해서 한국재래염소 4개 집단 48두를 공시한 후 mitochondrial DNA(mtDNA) 내부의 cytochrome b 유전자의 전체서열을 분석하였다. 또한 이 서열들을 이용하여 한국재래염소의 유전적 다양성을 확인하였고, 다른 나라의 여러 염소품종들과의 계통유전학적 분석을 수행하였다. 한국재래염소 cytochrome b 유전자 서열을 토대로 3개의 염기변이가 동정되었으며, 그 중 2개는 아미노산 치환을 일으키는 missense 변이로 확인되었다. 또한 4개의 haplotype으로 분류되었는데, 이 중 3개는 중국 재래염소 품종에서도 나타났으나 다른 나라의 품종에서는 확인되지 않았다. 계통유전학적 분석 결과 모든 재래흑염소는 4개의 clade를 형성하였으나, 5개의 야생염소와는 독립적인 그룹을 형성하였다. 한국재래염소는 mtDNA D-loop에 분류되는 여러 모계혈통 중 모계혈통-A로 추정되는 clade 1에 포함되었다. 한국재래염소에서 보여진 각각의 haplotype은 중국 재래염소품종들과 상대적으로 가까운 유전적 유연관계를 보였다. 기존 연구결과와 본 연구의 분석결과를 종합해보면 과거에 일부 중국 재래염소품종이 한반도로 유입되어 한국재래염소의 기원 및 가축화에 영향을 주었을 것으로 사료된다. The goal of this study was to verify the phylogenetic status of the Korean native goats(KNG). We determined the complete sequence of the mitochondrial cytochrome b gene in 48 goats among four populations. We also analyzed genetic variability within goats, and a phylogenetic analysis was performed by comparison with other country`s goats. Three nucleotide substitutions were detected, and two of these were missense mutations that occurred due to a substitution of amino acid. Four haplotypes were defined from KNG. Three of these haplotypes were only found in the Chinese goat. However, the other haplotype was KNG-specific. In the phylogenetic analysis, four clades(A~D) were classified among domestic goats, and the KNG was classified into clade 1 that estimated as lineage A based on the D-loop sequence. Each haplotype from the KNG was clustered closely with that of the Chinese goat. The results of haplotype distribution and phylogenetic location suggest that strong gene flow occurred from China to the Korean Peninsula.