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A-to-I RNA Editing Contributes to Proteomic Diversity in Cancer
Peng, Xinxin,Xu, Xiaoyan,Wang, Yumeng,Hawke, David H.,Yu, Shuangxing,Han, Leng,Zhou, Zhicheng,Mojumdar, Kamalika,Jeong, Kang Jin,Labrie, Marilyne,Tsang, Yiu Huen,Zhang, Minying,Lu, Yiling,Hwu, Patrick Cell Press 2018 CANCER CELL Vol. No.
Kim, Seung-Wook,Cheon, Kyounga,Kim, Chang-Hoon,Yoon, Joo-Heon,Hawke, David H.,Kobayashi, Ryuji,Prudkin, Ludmila,Wistuba, Ignacio I.,Lotan, Reuben,Hong, Waun Ki,Koo, Ja Seok American Association for Cancer Research 2007 Cancer Research Vol.67 No.14
<P>Squamous cell carcinoma in the lung originates from bronchial epithelial cells that acquire increasingly abnormal phenotypes. Currently, no known biomarkers are clinically efficient for the early detection of premalignant lesions and lung cancer. We sought to identify secreted molecules produced from squamous bronchial epithelial cells cultured with organotypic culture methods. We analyzed protein expression patterns in the apical surface fluid (ASF) from aberrantly differentiated squamous metaplastic normal human tracheobronchial epithelial (NHTBE) and mucous NHTBE cells. Comparative two-dimensional PAGE analysis revealed 174 unique proteins in the ASF of squamous NHTBE cells compared with normal mucociliary differentiated NHTBE cells. Among them, 64 well-separated protein spots were identified by liquid chromatography-tandem mass spectrometry, revealing 22 different proteins in the ASF from squamous NHTBE cells. Expression of six of these proteins [SCC antigen 1 (SCCA1), SCC antigen 2 (SCCA2), S100A8, S100A9, Annexin I, and Annexin II] in the squamous NHTBE cells was further confirmed with immunoblot analysis. Notably, SCCA1 and SCCA2 were verified as being expressed in squamous metaplastic NHTBE cells but not in normal mucous NHTBE or normal bronchial epithelium. Moreover, SCCA1 and SCCA2 expression increased in in vitro lung carcinogenesis model cell lines with increasing malignancy. In summary, we identified proteins that are uniquely secreted from squamous metaplastic primary human bronchial epithelial cells cultured by the organotypic air-liquid interface method. These ASF proteins may be used to detect abnormal lesions in the lung without collecting invasive biopsy specimens.</P>
Hawk-Bin Kwon,Eul-Won Hwang,정종주 한국응용생명화학회 2009 Applied Biological Chemistry (Appl Biol Chem) Vol.52 No.5
EREBP, ethylene responsive element binding protein, plays a role in plant tolerance to abiotic stresses such as low temperatures, drought and high salinity. We previously used cDNA microarrays and northern blot analysis to determine the mechanisms responsible for those underlying defenses. These analyses led to identification of CaEREBP-C4, a gene that encodes the ethylene responsive element binding protein from hot pepper (Capsicum annuum). In that study, we demonstrated that the CaEREBP-C4 gene was strongly induced by cold stress. Here, we used Ti-plasmid and Agrobacterium-mediated transformation to engineer CaEREBP-C4 under control of the CaMV 35S promoter for constitutive expression in transgenic tobacco. The resultant CaEREBP-C4 transgenic plants exhibited significantly increased tolerance to low temperature. Moreover, the transgenic plants that showed strong cold tolerance also had greater tolerance to drought stress. In addition, none of the CaEREBP-C4 transgenic plants showed visible phenotypic alteration when compared to wild type plants. Taken together, these results suggest that CaEREBP-C4 plays a biological role in conferring plant abiotic stress tolerance.
Kwon, Hawk-Bin,Hwang, Eul-Won,Cheong, Jong-Joo The Korean Society for Applied Biological Chemistr 2009 Applied Biological Chemistry (Appl Biol Chem) Vol.52 No.5
EREBP, ethylene responsive element binding protein, plays a role in plant tolerance to abiotic stresses such as low temperatures, drought and high salinity. We previously used cDNA microarrays and northern blot analysis to determine the mechanisms responsible for those underlying defenses. These analyses led to identification of CaEREBP-C4, a gene that encodes the ethylene responsive element binding protein from hot pepper (Capsicum annuum). In that study, we demonstrated that the CaEREBP-C4 gene was strongly induced by cold stress. Here, we used Ti-plasmid and Agrobacterium-mediated transformation to engineer CaEREBP-C4 under control of the CaMV 35S promoter for constitutive expression in transgenic tobacco. The resultant CaEREBP-C4 transgenic plants exhibited significantly increased tolerance to low temperature. Moreover, the transgenic plants that showed strong cold tolerance also had greater tolerance to drought stress. In addition, none of the CaEREBP-C4 transgenic plants showed visible phenotypic alteration when compared to wild type plants. Taken together, these results suggest that CaEREBP-C4 plays a biological role in conferring plant abiotic stress tolerance.