Transcriptional Analysis of 10 Selected Genes in a Model of Penicillin G Induced Persistence of Chlamydophila psittaci in HeLa Cells

( Yan Qun Hu ),( Li Li Chen ),( Chuan Wang ),( Ya Feng Xie ),( Zhi Xi Chen ),( Liang Zhuan Liu ),( Ze Hong Su ),( Yi Mou Wu ) 한국미생물 · 생명공학회 2015 Journal of microbiology and biotechnology Vol.25 No.8

Chlamydophila psittaci is an important intracellular pathogen. Persistent infection is an important state of the host-parasite interaction in this chlamydial infection, which plays a significant role in spreading the organism within animal populations and in causing chronic chlamydiosis and serious sequelae. In this study, a C. psittaci persistent infection cell model was induced by penicillin G, and real-time quantitative PCR was used to study the transcriptional levels of 10 C. psittaci genes (dnaA, dnaK, ftsW, ftsY, grpE, rpsD, incC, omcB, CPSIT_0846, and CPSIT_0042) in acute and penicillin-G-induced persistent infection cultures. Compared with the acute cultures, the penicillin-G-treated cultures showed a reduced chlamydial inclusion size and a significantly decreased number of elementary body particles. Additionally, some enlarged aberrant reticulate body particles were present in the penicillin- G-treated cultures but not the acute ones. The expression levels of genes encoding products for cell division (FtsW, FtsY) and outer membrane protein E encoding gene (CPSIT_0042) were downregulated (p < 0.05) from 6 h post-infection onward in the persistent infection cultures. Also from 6 h post-infection, the expression levels of DnaA, DnaK, IncC, RpsD, GrpE, and CPSIT_0846 were upregulated (p < 0.05); however, the expression level of OmcB in the persistent infection was almost the same as that in the acute infection (p > 0.05). These results provide new insight regarding molecular activities that accompany persistence of C. psittaci, which may play important roles in the pathogenesis of C. psittaci infection.

Nuclear DNA content variation of three Miscanthus species in China

Xi Li,Die Hu,Manman Luo,Ming Zhu,Xinwei Li,Fan Luo,Jianqiang Li,Juan Yan 한국유전학회 2013 Genes & Genomics Vol.35 No.1

In order to estimate the variation in nuclear genome size in Miscanthus, flow cytometry of nuclei stained by propidium iodide was carried out using 36 populations of three Miscanthus species: M. lutarioriparius, M. sacchariflorus and M. sinensis, which were sampled from cold northern to warm and humid southern and central China, as well as near the sea level in eastern China to mountains in western China. The DNA content of diploid was 4.37 ±0.02 pg/2C in M. lutarioriparius, 4.37 ± 0.01 pg/2C in M. sacchariflorus, and 5.37 ± 0.03 pg/2C in M. sinensis,respectively. There was no intraspecific variation in the three Miscanthus species at the diploid level, suggesting that the genome size was stable within species and the diverse environments did not induce variation in genome size at the diploid level. However, tetraploid populations were found in M. lutarioriparius and M. sacchariflorus, and their genome sizes were 8.56 and 8.54 pg, respectively, which are lower than expected values (8.74 pg), indicating the genome downsizing after polyploidization in the genus. Our results showed that the plant height of M. lutarioriparius was the highest one among the three species and the species was more closely related to M. sacchariflorus than M. sinensis. The intra-species genomic variation and inter-species differentiation in Miscanthus species provide important genetic and genomic information for the development of Miscanthus,especially for the endemic species, M. lutarioriparius,(together with Miscanthus 9 giganteus) which are now emerging as a key bio-energy crop because of their high yields and strong adaptability.

Constrained Markov Control Model and Online Stochastic Optimization Algorithm for Power Conservation in Multimedia Server Cluster Systems

Han Hu,Jian Yan,Liyue Zhu,Hong-Sheng Xi 제어·로봇·시스템학회 2012 International Journal of Control, Automation, and Vol.10 No.6

This paper presents a novel Markov switching state space control model for dynamically switching resource configuration scheme to achieve power conservation for multimedia server cluster systems. This model exploits the hierarchical dynamic structure of network system and its construction is flexible and scalable. Using this analytical model, the problem of power conservation is posed as a constrained stochastic optimization problem with the goal of minimizing the average power consump-tion subject to the constraint on the average blocking ratio. Applying Lagrange approach and online estimation of the performance gradient, a policy iteration algorithm is proposed to search the optimal policy online. This algorithm does not depend on any prior knowledge of system parameters, and con-verges to the optimal solution. Simulation results demonstrate the convergence of the proposed algo-rithm and effectiveness to different access workloads.

Optimal Tracking Performance of NCSs with Time-delay and Encoding-decoding Constraints

Jun-Wei Hu,Xi-Sheng Zhan,Jie Wu,Huai-Cheng Yan 제어·로봇·시스템학회 2020 International Journal of Control, Automation, and Vol.18 No.4

In this paper, the tracking performance of networked control systems (NCSs) under energy constraints with time-delay and encoding-decoding is studied. Through spectral factorization and partial decomposition techniques, we can obtain the explicit representation of the optimal performance. It is shown that the optimal performance is affected by non minimum phase (NMP) zeros, unstable poles and other multiple communication constraints such as time-delay, encoding-decoding and additive white Gaussian noise (AWGN). At the same time, the obtained result shows that a two-parameter compensator is superior to a one-parameter compensator. In addition, it is found that time-delay, encoding-decoding and AWGN affected the tracking capability of NCSs. Finally, an example is given for verifying the correctness of the conclusions.

Whole body hypoxic preconditioning-mediated multiorgan protection in db/db mice via nitric oxide-BDNF-GSK-3β-Nrf2 signaling pathway

Yuefang Li,Yan Huang,Xi Cheng,Youjun He,Xin Hu 대한생리학회-대한약리학회 2021 The Korean Journal of Physiology & Pharmacology Vol.25 No.4

The beneficial effects of hypoxic preconditioning are abolished in the diabetes. The present study was designed to investigate the protective effects and mechanisms of repeated episodes of whole body hypoxic preconditioning (WBHP) in db/db mice. The protective effects of preconditioning were explored on diabetes-induced vascular dysfunction, cognitive impairment and ischemia-reperfusion (IR)-induced increase in myocardial injury. Sixteen-week old db/db (diabetic) and C57BL/6 (non-diabetic) mice were employed. There was a significant impairment in cognitive function (Morris Water Maze test), endothelial function (acetylcholine-induced relaxation in aortic rings) and a significant increase in IR-induced heart in-jury (Langendorff apparatus) in db/db mice. WBHP stimulus was given by exposing mice to four alternate cycles of low (8%) and normal air O2 for 10 min each. A single episode of WBHP failed to produce protection; however, two and three episodes of WBHP significantly produced beneficial effects on the heart, brain and blood vessels. There was a significant increase in the levels of brain-derived neurotrophic factor (BDNF) and nitric oxide (NO) in response to 3 episodes of WBHP. Moreover, pretreat-ment with the BDNF receptor, TrkB antagonist (ANA-12) and NO synthase inhibitor (L-NAME) attenuated the protective effects imparted by three episodes of WBHP. These pharmacological agents abolished WBHP-induced restoration of p-GSK-3β/GSK-3βratio and Nrf2 levels in IR-subjected hearts. It is concluded that repeated episodes of WHBP attenuate cognitive impairment, vascular dysfunction and enhancement in IR-induced myocardial injury in diabetic mice be due to increase in NO and BDNF levels that may eventually activate GSK-3β and Nrf2 signaling pathway to confer protec-tion.

Apatinib Combined with Local Irradiation Leads to Systemic Tumor Control via Reversal of Immunosuppressive Tumor Microenvironment in Lung Cancer

Li-jun Liang,Chen-xi Hu,Yi-xuan Wen,Xiao-wei Geng,Ting Chen,Guo-qing Gu,Lei Wang,You-you Xia,Yong Liu,Jia-yan Fei,Jie Dong,Feng-hua Zhao,Yiliyar Ahongjiang,Kai-yuan Hui,Xiao-dong Jiang 대한암학회 2020 Cancer Research and Treatment Vol.52 No.2

Purpose This study aimed to investigate the potential systemic antitumor effects of stereotactic ablative radiotherapy (SABR) and apatinib (a novel vascular endothelial growth factor receptor 2 inhibitor) via reversing the immunosuppressive tumor microenvironment for lung carcinoma. Materials and Methods Lewis lung cancer cells were injected into C57BL/6 mice in the left hindlimb (primary tumor; irradiated) and in the right flank (secondary tumor; nonirradiated). When both tumors grew to the touchable size, mice were randomly divided into eight treatment groups. These groups received normal saline or three distinct doses of apatinib (50 mg/kg, 150 mg/kg, and 200 mg/kg) daily for 7 days, in combination with a single dose of 15 Gy radiotherapy or not to the primary tumor. The further tumor growth/regression of mice were followed and observed. Results For the single 15 Gy modality, tumor growth delay could only be observed at the primary tumor. When combining SABR and apatinib 200 mg/kg, significant retardation of both primary and secondary tumor growth could be observed, indicated an abscopal effect was induced. Mechanism analysis suggested that programmed death-ligand 1 expression increased with SABR was counteract by additional apatinib therapy. Furthermore, when apatinib was combined with SABR, the composition of immune cells could be changed. More importantly, this two-pronged approach evoked tumor antigen–specific immune responses and the mice were resistant to another tumor rechallenge, finally, long-term survival was improved. Conclusion Our results suggested that the tumor microenvironment could be managed with apatinib, which was effective in eliciting an abscopal effect induced by SABR.

Vesicular Stomatitis Virus G Glycoprotein and ATRA Enhanced Bystander Killing of Chemoresistant Leukemic Cells by Herpes Simplex Virus Thymidine Kinase/Ganciclovir

( Bin Yin ),( Chen Xi Hu ),( Zheng Chen ),( Wen Jun Zhao ),( Li Rong Wei ),( Yan Wen Zheng ),( Chao He ),( Yan Zeng ) 한국응용약물학회 2014 Biomolecules & Therapeutics(구 응용약물학회지) Vol.22 No.2

Vesicular Stomatitis Virus G Glycoprotein and ATRA EnhancedBystander Killing of Chemoresistant Leukemic Cells by HerpesSimplex Virus Thymidine Kinase/Ganciclovir

THE PERIODIC JACOBI MATRIX PROCRUSTES PROBLEM

Li, Jiao-Fen,Hu, Xi-Yan The Korean Society for Computational and Applied M 2010 Journal of applied mathematics & informatics Vol.28 No.3

The following "Periodic Jacobi Procrustes" problem is studied: find the Periodic Jacobi matrix X which minimizes the Frobenius (or Euclidean) norm of AX - B, with A and B as given rectangular matrices. The class of Procrustes problems has many application in the biological, physical and social sciences just as in the investigation of elastic structures. The different problems are obtained varying the structure of the matrices belonging to the feasible set. Higham has solved the orthogonal, the symmetric and the positive definite cases. Andersson and Elfving have studied the symmetric positive semidefinite case and the (symmetric) elementwise nonnegative case. In this contribution, we extend and develop these research, however, in a relatively simple way. Numerical difficulties are discussed and illustrated by examples.

THE PERIODIC JACOBI MATRIX PROCRUSTES PROBLEM

Jiao-fen Li,XI-YAN HU 한국전산응용수학회 2010 Journal of applied mathematics & informatics Vol.28 No.3

The following ”Periodic Jacobi Procrustes” problem is stud-ied: find the Periodic Jacobi matrix X which minimizes the Frobenius (or Euclidean) norm of AX −B, with A and B as given rectangular matrices. The class of Procrustes problems has many application in the biological,physical and social sciences just as in the investigation of elastic struc-tures. The different problems are obtained varying the structure of the matrices belonging to the feasible set. Higham has solved the orthogonal,the symmetric and the positive definite cases. Andersson and Elfving have studied the symmetric positive semidefinite case and the (symmetric) el-ementwise nonnegative case. In this contribution, we extend and develop these research, however, in a relatively simple way. Numerical difficulties are discussed and illustrated by examples.

TiO2 thin films prepared from aqueous solution and their sterilizing capability

Sun Shu-qing,Hu Yan-tao,Xi Zheng-ying,Duan Chun-yan,Meng Yan 한양대학교 세라믹연구소 2006 Journal of Ceramic Processing Research Vol.7 No.1

A liquid phase deposition method (LPD) has been devised for the deposition of TiO2 thin films on glass at a low temperature. The substrates were immersed in a diluted homogeneous aqueous solution which was prepared by mixing equal volumes of ammonium hexauorotitanate and boric acid solution. The TiO2 thin films obtained were well-adhered, homogenous and colored by interference of reflected light. XRD indicated TiO2 thin films showed a high degree of crystallinity and the crystal phase observed was anatase. SEM experiments showed that the films are formed by small crystallites having linear dimensions under 50 nm. Their thickness was in the range of 100~300 nm. The sterilizing experiment of S. aureus and E. coli showed that TiO2 thin films have excellent sterilizing activity. The optimum conditions of the films were with heat treatment at 400oC where their sterilizing percentage reached over 99% after 24h.