LEF1-mediated MMP13 gene expression is repressed by SIRT1 in human chondrocytes

Elayyan, Jinan,Lee, Eun-Jin,Gabay, Odile,Smith, Christopher A.,Qiq, Omar,Reich, Eli,Mobasheri, Ali,Henrotin, Yves,Kimber, Susan J.,Dvir-Ginzberg, Mona The Federation of American Societies for Experimen 2017 The FASEB Journal Vol.31 No.7

<P>Reduced SIRT1 activity and levels during osteoarthritis (OA) promote gradual loss of cartilage. Loss of cartilage matrix is accompanied by an increase in matrix metalloproteinase (MMP) 13, partially because of enhanced LEF1 transcriptional activity. In this study, we assessed the role of SIRT1 in LEF1-mediated MMP13 gene expression in human OA chondrocytes. Results showed that MMP13 protein levels and enzymatic activity decreased significantly during SIRT1 overexpression or activation by resveratrol. Conversely, MMP13 gene expression was reduced in chondrocytes transfected with SIRT1 siRNA or treated with nicotinamide (NAM), a sirtuin inhibitor. Chondrocytes challenged with IL-113, a cytokine involved in OA pathogenesis, enhanced LEF1 protein levels and gene expression, resulting in increased MMP13 gene expression; however, overexpression of SIRT1 during IL-113 challenge impeded LEF1 levels and MMP13 gene expression. Previous reports showed that LEF1 binds to the MMP13 promoter and transactivates its expression, but we observed that SIRT1 repressed LEF1 protein and mRNA expression, ultimately reducing LEF1 transcriptional activity, as judged by luciferase assay. Finally, mouse articular cartilage from Sirt1-/presented increased LEF1 and MMP13 protein levels, similar to human OA cartilage. Thus, demonstrating for the first time that SIRT1 represses MMP13 in human OA chondrocytes, which appears to be mediated, at least in part, through repression of the transcription factor LEF1, a known modulator of MMP13 gene expression. Elayyan, J., Lee, E.-J., Gabay, O., Smith, C. A., Qiq, O., Reich, E., Mobasheri, A., Henrotin, Y., Kimber, S. J., Dvir-Ginzberg, M. LEF1-mediated MMP13 gene expression is repressed by SIRT1 in human chondrocytes.</P>

Hsp70 and HSF-1 expression is altered in the tissues of pigs transported for various periods of times

Miao Zhang,Zhenhua Yue,Zhijun Liu,Ali Islam,Buriro Rehana,Shu Tang,Jörg Hartung,Endong Bao 대한수의학회 2012 Journal of Veterinary Science Vol.13 No.3

The aim of this study was to assess changes of Hsp70 and HSF-1 protein and mRNA expression in stress-sensitive organs of pigs during transportation for various periods of time. Twenty pigs were randomly divided into four groups (0 h, 1 h, 2 h, and 4 h of transportation). A significant increased activity of AST and CK was observed after 1 h and 2 h of transportation. Histopathological changes in the heart, liver, and stomach indicated that these organs sustained different degrees of injury. Hsp70 protein expression in the heart and liver of transported pigs did not change significantly while it increased significantly (p < 0.05) in the stomach. Hsp70 mRNA levels decreased significantly (p < 0.05) in the heart after 4 h of transportation. However, mRNA expression increased significantly in the liver after 1 (p < 0.05) and 4 h (p < 0.01) of transportation, and increased significantly in the stomach of the transported pigs after 1, 4 (p < 0.01), and 2 h (p < 0.05). HSF-1 levels were reduced at 1 and 4 h (p < 0.05) only in the hearts of transported pigs. These results indicate that Hsp70 mediates distinct stress-related functions in different tissues during transportation.

Evaluation of stability in maize hybrids using univariate parametric methods

Seyed Habib Shojaei,Mostafavi Khodadad,Lak Amirparviz,Omrani Ali,Omrani Saeed,Mousavi Seyed Mohammad Nasir,Illés Árpád,Bojtor Csaba,János Nagy 한국작물학회 2022 Journal of crop science and biotechnology Vol.25 No.3

Genotype × environment interaction is one of the complex issues of breeding programs to produce high-yielding and compatible cultivars. Interaction of genotype × environment and make the more accurate selection, the performance and stability of hybrids need to be considered simultaneously. This study aimed to investigate stable genotypes with yield using 12 maize hybrids in different climatic conditions of Iran. The experimental design used was a randomized complete blocks design in three replications in two cropping years in Karaj, Birjand, Shiraz, and Arak stations. The simple analysis of variance performed on grain yield of genotypes indicated that all hybrids studied each year and station were significantly different in grain yield. Also, the combined analysis results showed a significant effect on the environment, the effects of genotype, and the interaction of genotype × environment and t in the studied hybrids different. Comparing Duncan's mean on the data obtained from the research, KSC705 genotypes with an average yield of 7.21 and KSC704 genotype with an average yield of 7.04 were identified as high yield cultivars. In order to identify stable cultivars, six stability parameters were used. KSC260 and KSC707 genotypes had stability Based on the environmental variance, also had stability based KSC705, KSC707 genotype on environmental the coefficient of variation, and KSC260 genotypes had stability based methods of genotype and environment interaction. As well as based on Eberhart and Russell regression coefficient had the stability to KSC400 and SC647 genotypes. Also, they were identified as the most stable genotypes based on the detection coefficient method, KSC707, and KSC703 genotypes.

Comparison of As, Ni, Zn, Cd, and Pb removals using treatment agents

Choi, J.,Yang, J. S.,Tae Park, Y.,Kim, J. O.,Kim, K. J.,Shim, Y. S.,Kwon, H. H.,Ali Khan, M.,Park, J. W.,Um, J. G. Taylor Francis 2012 Environmental Technology Vol.33 No.4

Impact of low dose atorvastatin on development of new-onset diabetes mellitus in Asian population: Three-year clinical outcomes

Park, J.Y.,Rha, S.W.,Choi, B.,Choi, J.W.,Ryu, S.K.,Kim, S.,Noh, Y.K.,Choi, S.Y.,Akkala, R.G.,Li, H.,Ali, J.,Xu, S.,Ngow, H.A.,Lee, J.J.,Lee, G.N.,Kim, J.,Lee, S.,Na, J.O.,Choi, C.U.,Lim, H.E.,Kim, J.W Elsevier/North-Holland Biomedical Press 2015 INTERNATIONAL JOURNAL OF CARDIOLOGY Vol.184 No.-

Background: High dose atorvastatin is known to be associated with new onset diabetes mellitus (NODM) in patients with high risk for developing diabetes mellitus (DM). However, low dose atorvastatin is more commonly used as compared with high dose atorvastatin. The aim of this study is to investigate the impact of low dose atorvastatin (LDA, 10mg or 20mg) on the development of NODM up to three years in Asian patients. Methods: From January 2004 to September 2009, we investigated a total of 3566 patients who did not have DM. To adjust for potential confounders, a propensity score matching (PSM) analysis was performed using the logistic regression model. After PSM (C-statistics: 0.851), a total of 818 patients (LDA group, n=409 patients and control group, n=409 patients) were enrolled for analysis. Results: Before PSM, the cumulative incidence of NODM (5.8% vs. 2.1%, p<0.001), myocardial infarction (0.5% vs. 0.1%, p-value=0.007), and major adverse cardio-cerebral event (MACCE, 1.8% vs. 0.7%, p-value=0.012) at three-years were higher in the LAD group. However, after PSM, there was a trend toward higher incidence of NODM (5.9% vs. 3.2%, p=0.064) in the LDA group, but the incidence of MACCE (1.2% vs. 1.5%, p-value=1.000) was similar between the two groups. In multivariable analysis, the LDA administration was tended to be an independent predictor of NODM (OR: 1.99, 95% CI: 1.00-3.98, p-value 0.050). Conclusions: In this study, the use of LDA tended to be a risk factor for NODM in Asian patients and reduced clinical events similar to the control group. However, large-scale randomized controlled trials will be needed to get the final conclusion.

Five-year clinical outcomes in patients with significant coronary artery spasm: A propensity score-matched analysis

Choi, B.G.,Park, S.H.,Rha, S.W.,Park, J.Y.,Choi, S.Y.,Park, Y.,Xu, S.,Ngow, H.A.,Ali, J.,Li, H.,Kim, J.B.,Lee, S.,Na, J.O.,Choi, C.U.,Lim, H.E.,Kim, J.W.,Kim, E.J.,Park, C.G.,Seo, H.S.,Oh, D.J. Elsevier/North-Holland Biomedical Press 2015 INTERNATIONAL JOURNAL OF CARDIOLOGY Vol.184 No.-

Background: Coronary artery spasm (CAS) is known to be a risk factor of acute coronary syndrome and angina pectoris. However, there is no currently available data with larger study population regarding long-term clinical outcomes of CAS in real world clinical practice. Objectives: We evaluated the prevalence of CAS and the impact of CAS on 5-year clinical outcomes in a series of Asian CAS patients documented by intracoronary acetylcholine (Ach) provocation test. Methods: A total of 1413 consecutive patients without significant coronary artery disease (CAD) who underwent Ach provocation test between Nov. 2004 and Oct. 2008 were enrolled. Significant CAS was defined as >70% of narrowing by incremental intracoronary injection of 20, 50 and 100μg. Patients were divided into two groups based on the presence of significant CAS (the non-CAS group: n=640, the CAS group; n=773). To adjust potential confounders, a propensity score matched (PSM) analysis was performed using the logistic regression model. Results: A total of 54.7% (773/1413) patients were diagnosed as CAS documented by Ach provocation test. After PSM analysis, 2 propensity-matched groups (451 pairs, n=902, C-statistic=0.677) were generated. Despite of similar incidence of individual hard endpoints including mortality, myocardial infarction and revascularization, the CAS group showed the higher trend of recurrent angina requiring follow up angiography than the non-CAS group up to 5years (HR; 1.56, 95% C.I.; 0.99-2.46, p=0.054). Conclusions: The prevalence of CAS was 54.7%. Although the cumulative incidence of recurrent angina requiring follow up coronary angiography seems to be increased up to 5years in CAS patients, CAS patients was not associated with major individual and composite clinical outcomes such as mortality, MI, PCI, CVA with optimal medical therapy as compared with patients without CAS.

Fabrication of blue luminescent MoS₂ quantum dots by wet grinding assisted co-solvent sonication

Ali, J.,Siddiqui, G.U.,Choi, K.H.,Jang, Y.,Lee, K. Elsevier [etc.] 2016 Journal of luminescence Vol.169 No.1

Molybdenum disulfide (MoS<SUB>2</SUB>) belongs to transition-metal dichalcogenides (TMDs) family and has vital position among 2D materials. Here, an efficient strategy for the synthesis of zero-dimensional MoS<SUB>2</SUB> quantum dots (QDs) has been represented. This strategy consists of wet grinding of pristine MoS<SUB>2</SUB> in N-methyl-2-pyrrolidone (NMP) followed by sonication in NMP and 1,2-dichlorobenzene (o-DCB). The efficacy of this approach to synthesize MoS<SUB>2</SUB> QDs has been reported by analyzing the as synthesized MoS<SUB>2</SUB> QDs by different characterization techniques such as high resolution transmission electron microscopy, energy dispersive x-ray spectroscopy, Raman spectroscopy, photoluminescence spectroscopy, Fourier transform infrared spectroscopy and UV-vis spectroscopy. The concentration (yield) of as synthesized MoS<SUB>2</SUB> QDs was found to be 7mgmL<SUP>-1</SUP>. Most of the MoS<SUB>2</SUB> QDs were measured around 2-5nm in size. The as synthesized MoS<SUB>2</SUB> QDs showed distinct blue luminescence upon UV excitation.

Numerical investigation on the flow mixing feature inside a continuously carbonating process tank

Ali, H.,Kim, K.W.,Kwak, M.K.,Kim, J.S.,Choi, J.Y.,Park, C.W. Pergamon Press ; Elsevier Science Ltd 2016 Computers & electrical engineering Vol.51 No.-

<P>A carbonating tank is continuously operated and filled with water supplied by an immersed flow injecting nozzle. At the same time, CO2 gas is introduced from the gas tank. CO2 gas can be dissolved in water and can form carbonated water with minimum production of gas bubbles depending on various process conditions. Therefore, the flow mixing phenomenon of CO2 and water can be affected by the placement of the injecting nozzle and the flow rate in consideration of the interfacial surface. In this study, the gas-liquid flow mixing with the mass transport inside the carbonation process tank is numerically predicted. The Euler-Euler methodology is used to observe the effects of the design of the injecting nozzle, the gas bubble size, as well as the velocities of liquid and gas on the gas volume fraction, liquid velocity, gas concentration, interfacial area, and mass transfer coefficient. (C) 2015 Elsevier Ltd. All rights reserved.</P>

Inactivation of Propionibacterium acnes and its biofilm by non-thermal plasma

Ali, A.,Kim, Y.H.,Lee, J.Y.,Lee, S.,Uhm, H.S.,Cho, G.,Park, B.J.,Choi, E.H. Elsevier 2014 Current Applied Physics Vol.14 No.suppl2

Propionibacterium acnes (P. acnes) is an opportunistic gram positive pathogen which has become an important source of various surgical implant associated infections including artificial joints, shunts, heart valves and catheter's infections. In addition, P. acnes can form biofilm which may enhance the complications even more. Even though it is susceptible to most of the antibiotics but still hard to remove and in severe cases removal of device is suggested. This makes the failure of implants. These problems prompted us to find more efficient method to sterilize these contaminations. Non-thermal plasmas primarily generate reactive species and recently have emerged as an efficient tool for medical applications including sterilization. Therefore, in this study we evaluated the inactivation ability of two different plasma jets, non-thermal annular plasma jet (NAPJ) and non-thermal soft plasma jet (NSPJ) for P. acnes in planktonic state and biofilm state. And, we found that both plasma devices showed considerable inactivation potential in planktonic P. acnes and P. acnes biofilms. Especially, NSPJ showed better inhibitory effect in shorter exposer time than NAPJ which might be because of close exposure to plasma generated reactive species. Moreover, we found that intracellular and extracellular reactive species concentrations are correlated with plasma treatment time, which suggest their critical role in microbial inhibition. In conclusion, our study suggests that plasma technology may also be used to overcome the biofilm contamination problems associated with biomaterials including surgical devices.

Multi-model-based interactive authoring environment for creating shareable medical knowledge

Ali, T.,Hussain, M.,Ali Khan, W.,Afzal, M.,Hussain, J.,Ali, R.,Hassan, W.,Jamshed, A.,Kang, B.H.,Lee, S. Elsevier Science Publishers 2017 Computer methods and programs in biomedicine Vol.150 No.-

Objective: Technologically integrated healthcare environments can be realized if physicians are encouraged to use smart systems for the creation and sharing of knowledge used in clinical decision support systems (CDSS). While CDSSs are heading toward smart environments, they lack support for abstraction of technology-oriented knowledge from physicians. Therefore, abstraction in the form of a user-friendly and flexible authoring environment is required in order for physicians to create shareable and interoperable knowledge for CDSS workflows. Our proposed system provides a user-friendly authoring environment to create Arden Syntax MLM (Medical Logic Module) as shareable knowledge rules for intelligent decision-making by CDSS. Methods and materials: Existing systems are not physician friendly and lack interoperability and shareability of knowledge. In this paper, we proposed Intelligent-Knowledge Authoring Tool (I-KAT), a knowledge authoring environment that overcomes the above mentioned limitations. Shareability is achieved by creating a knowledge base from MLMs using Arden Syntax. Interoperability is enhanced using standard data models and terminologies. However, creation of shareable and interoperable knowledge using Arden Syntax without abstraction increases complexity, which ultimately makes it difficult for physicians to use the authoring environment. Therefore, physician friendliness is provided by abstraction at the application layer to reduce complexity. This abstraction is regulated by mappings created between legacy system concepts, which are modeled as domain clinical model (DCM) and decision support standards such as virtual medical record (vMR) and Systematized Nomenclature of Medicine - Clinical Terms (SNOMED CT). We represent these mappings with a semantic reconciliation model (SRM). Results: The objective of the study is the creation of shareable and interoperable knowledge using a user-friendly and flexible I-KAT. Therefore we evaluated our system using completeness and user satisfaction criteria, which we assessed through the system- and user-centric evaluation processes. For system-centric evaluation, we compared the implementation of clinical information modelling system requirements in our proposed system and in existing systems. The results suggested that 82.05% of the requirements were fully supported, 7.69% were partially supported, and 10.25% were not supported by our system. In the existing systems, 35.89% of requirements were fully supported, 28.20% were partially supported, and 35.89% were not supported. For user-centric evaluation, the assessment criterion was 'ease of use'. Our proposed system showed 15 times better results with respect to MLM creation time than the existing systems. Moreover, on average, the participants made only one error in MLM creation using our proposed system, but 13 errors per MLM using the existing systems. Conclusion: We provide a user-friendly authoring environment for creation of shareable and interoperable knowledge for CDSS to overcome knowledge acquisition complexity. The authoring environment uses state-of-the-art decision support-related clinical standards with increased ease of use.