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        • KCI등재후보

          A report of 39 unrecorded bacterial species in Korea, belonging to the Betaproteobacteria and Gammaproteobacteria

          Ahyoung Choi,Jin-Woo Bae,CHANG-JUN CHA,Jongsik Chun,임완택,Kwang-Yeop Jahng,Che Ok Jeon,KISEONG JOH,김승범,성치남,Jung-Hoon Yoon,조장천 국립생물자원관 2015 Journal of species research Vol.4 No.2

          As a subset study to discover indigenous prokaryotic species in Korea, a total of 39 bacterial strains assigned to the classes Betaproteobacteria and Gammaproteobacteria were isolated from diverse environmental samples collected from soil, tidal flat, freshwater, seawater, seaweed, wetland, plant roots, guts of insects, and fermented foods. From the high 16S rRNA gene sequence similarity (>99.1%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to each independent and predefined bacterial species. There is no official report that these 39 species have been described in Korea; therefore 4 species of 4 genera in the order Burkholderiales and 1 species in the order Neisseriales within the class Betaproteobacteria, and 10 species of 6 genera in the order Alteromonadales, 11 species of 3 genera in the order Pseudomonadales, 4 species of 4 genera in the order Enterobacteriales, 2 species of 2 genera in the order Vibrionales, 1 species in the order Aeromonadales, 3 species of 3 genera in the order Oceanospirillales, 2 species of 2 genera in the order Xanthomonadales, and 1 species in the order Chromatiales within the Gammaproteobacteia are reported for proteobacterial species found in Korea. Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and strain IDs are also described in the species description section.

        • KCI등재후보

          Recent progress in studies of the Cladocera (Crustacea: Branchiopoda) of South Korea with seven new records for the Korean Peninsula

          Alexey A. Kotov,Artem Y. Sinve,Petr G. Garibian,Anna N. Neretina,정현기,이원철,채규석,민기식 국립생물자원관 2017 Journal of species research Vol.0 No.-

          A study of the Cladocera (Crustacea: Branchiopoda) from the Korean Peninsula resulted in the checklist of Jeong et al. (2014). Several sampling campaigns conducted by our team since 2014, with the framework of the programs supported by the National Institute of Biological Resources (NIBR), have resulted in a considerable increase in the number of water bodies studied in South Korea. In this report, seven new records for the Korean Peninsula are provided: (1) Macrothrix vietnamensis Silva-Briano, Dieu and Dumont, 1999; (2) Disparalona chappuisi (Brehm, 1931); (3) Pleuroxus (Picripleuroxus) quasidenticulatus (Smirnov, 1996); (4) Acroperus africanus Neretina and Kotov, 2015; (5) Alona ossiani herricki Sinev, 2013; (6) Coronatella trachystriata (Chen, Zhang and Liu, 1994); (7) Leydigia louisi Jenkin, 1934. Most of these taxa belong to the southern thermophilic complex. In addition several populations of Pleuroxus (Picripleuroxus) denticulatus Birge, 1879 and Pseudochydorus globosus (Baird, 1843) were re-studied, and their presence in Korea is confirmed. Through increased collection efforts and the application of molecular methods we are confident that more new records of Korean fauna will be published in the near future.

        • KCI등재후보

          An unrecorded species of Hemicycliophora litoralis (Criconematoidea: Hemicyliophorinae) from South Korea

          강현일,은근,하지혜,김용철,최인수,김동근 국립생물자원관 2016 Journal of species research Vol.5 No.3

          Hemicycliophora litoralis is newly collected from Korea. Korean population is well matched and within a range of original description and additional record from Solomon island in de Man’s of L, b, c, V, R, Rex, Ran, Roes, RV (ant), annule, excretory pore, stylet length, and tail length. Differences are observed in RV and RVan. RV and RVan of original description was 55 (48-69) and 14 (10-19) but Korean population is 68 (61-76) and 22 (19-24), respectively. H. litoralis described from Solomon island has RVan of 19.6 (17-23) and is similar to Korean population. H. litoralis from Solomon island has slight higher Rst value of 39 (35-59) compared to Korean population of 33.5 (29-38). The measurements of MB (%), s, G1, G2 values are newly given.

        • KCI등재

          Morphological description and molecular analysis of newly recorded Anneissia pinguis (Crinoidea: Comatulida: Comatulidae) from Korea

          김필재,신숙 국립생물자원관 2020 Journal of species research Vol.9 No.4

          The crinoid specimens of the genus Anneissia were collected from Nokdong, Korea Strait, and Moseulpo, Jeju Island. The specimens were identified as Anneissia pinguis (A.H. Clark, 1909), which belongs to the family Comatulidae of the order Comatulida. Anneissia pinguis was first described by A.H. Clark in 1909 around southern Japan. This species can be distinguished from other Anneissia species by a longish and stout cirrus, much fewer arms, and short distal cirrus segments. The morphological features of Korean specimens are as follows: large disk (20-35 mm), 28-36 segments and 32-43 mm length cirrus, division series in all 4(3+4), very stout and strong distal pinnule with 18-19 comb and 40 arms. In Korea fauna, only three species of genus Anneissia were recorded: A. intermedia, A. japonica, and A. solaster. In this study, we provide the morphological description and phylogenetic analysis based on cytochrome c oxidase subunit I.

        • KCI등재

          A report of 37 unrecorded anaerobic bacterial species isolated from the Geum River in South Korea

          이창수,김연비,노성운,김주석,안승우,송혜선,노성운,김준용 국립생물자원관 2020 Journal of species research Vol.9 No.2

          A total of 37 anaerobic bacteria strains within the classes Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Bacteroidia, Flavobacteriia, Bacilli, Clostridia, and Fusobacteriia were isolated from freshwater and sediment of the Geum River in Korea. The unreported species were related with Rhizobium and Oleomonas of the class Alphaproteobacteria; Acidovorax, Pseudogulbenkiania, and Aromatoleum of the class Betaproteobacteria; Tolumonas, Aeromonas, Cronobacter, Lonsdalea, and Phytobacter of the class Gammaproteobacteria; Bacteroides, Dysgonomonas, Macellibacteroides, and Parabacteroides of the class Bacteroidia; Flavobacterium of the class Flavobacteriia; Bacillus and Paenibacillus of the class Bacilli; Clostridium, Clostridioides, Paraclostridium, Romboutsia, Sporacetigenium, and Terrisporobacter of the class Clostridia; and Cetobacterium and Ilyobacter of the class Fusobacteriia. A total of 37 strains, with >98.7% 16S rRNA gene sequence similarity with validly published bacterial species, but not reported in Korea, were determined to be unrecorded anaerobic bacterial species in Korea.

        • KCI등재후보

          Molecular phylogeny of Indonesian Zeuzera (Lepidoptera:Cossidae) wood borer moths based on CO I gene sequence

          Hari Sutrisno 국립생물자원관 2015 Journal of species research Vol.4 No.1

          Zeuzera is one of the most important wood borer pests in South East Asia. Like of most other genera of moths, the systematic of this genus is still in dispute, especially on the monophyly and the relationship within this genus due to the fact that genus is very varied. This genus was defined based on external characters only such as cross vein Sc-Rs present, humeral plate approximately triangular in shape and anal plate moderately long to moderately short. Therefore, the monophyly of this genus need to be evaluated based on more comprehensive data. To clarify the monophyly of the genus Zeuzera, to reveal the phylogenetic relationships among the Indonesian species, and to establish the genetic characters of Indonesian Zeuzera, we analyzed seven species of Indonesian Zeuzera including three other species distributed around the world based on nucleotide sequence variation across a 580-bp region in the CO I gene. The results showed that the monophyly of Zeuzera was supported by bootstrap tests at the MP and ML tree building methods (¤95%). Genus Zeuzera was divided into two groups (A and B) with Z. borneana was excluded from the two groups and occupied at the basal node. Indonesian species was distributed into two different clades. CO I gene alone was able to fully resolve the relationships among species within clade B. However, further investigations were needed by including more species and other genes that the more conserved to test the validity of the phylogenetic hypothesis proposed here.

        • KCI등재후보

          Unrecorded species of Korean metazoans discovered through the project of “Discovery of Korean Indigenous Species” (2006-2010)

          송지훈,한영덕,이원구,김일회,박상규,이종락,서호영,이원철,정종우,김사흥,이준상,김주필,박태서,유정선,길현종,남은정,민기식 국립생물자원관 2017 Journal of species research Vol.0 No.-

          A research project entitled “Discovery of Korean Indigenous Species” was launched in 2006, and has been carried on as a continuous project until now. The main purpose of this project is to find undiscovered species on the Korean peninsula and ultimately register these species in the “National List of Species of Korea”. In this paper, we present 79 unrecorded species of the Korean metazoans. All species were obtained from the final reports of “Discovery of Korean Indigenous Species” which were performed during the first five years of the project, 2006 to 2010.

        • KCI등재

          Complete mitochondrial genome of Nyctalus aviator and phylogenetic analysis of the family Vespertilionidae

          이선미,이무용,김선숙,김희종,전희숙,안정화 국립생물자원관 2019 Journal of species research Vol.8 No.3

          Bats influence overall ecosystem health by regulating species diversity and being a major source of zoonotic viruses. Hence, there is a need to elucidate their migration, population structure, and phylogenetic relationship. The complete mitochondrial genome is widely used for studying the genome-level characteristics and phylogenetic relationship of various animals due to its high mutation rate, simple structure, and maternal inheritance. In this study, we determined the complete mitogenome sequence of the bird-like noctule (Nyctalus aviator) by Illumina next-generation sequencing. The sequences obtained were used to reconstruct a phylogenic tree of Vespertilionidae to elucidate the phylogenetic relationship among its members. The mitogenome of N. aviator is 16,863-bp long with a typical vertebrate gene arrangement, consisting of 13 protein-coding genes (PCGs), 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 putative control region. Overall, the nucleotide composition is as follows: 32.3% A, 24.2% C, 14.3% G, and 29.2% T, with a slight AT bias (61.5%). The base composition of the 13 PCGs is as follows: 30.3% A, 13.4% G, 31.0% T, and 25.2% C. The phylogenetic analysis, based on 13 concatenated PCG sequences, infers that N. aviator is closely related to N. noctula with a high bootstrap value (100%).

        • KCI등재

          Notes on bird species newly recorded in Korea

          김화정,김동원,허위행,Byoungsoon Jang,Yun Kyung Lee,권인기,Jong-Hyun Park,Jong-Gil Park,Chang-Wan Kang,Eun-Mi Kim,Soon-Kyoo Choi,김한규 국립생물자원관 2020 Journal of species research Vol.9 No.4

          A total of 527 species of birds have been recorded in Korea. We summarize the records of three genera and six species that have been newly reported in Korea, discovered through the avian monitoring programs carried out by The National Institute of Biological Resources from 2013 to 2016. These six newly recorded species are; Ring-necked Duck (Aythya collaris), Lesser Scaup (Aythya affinis), Bufflehead (Bucephala albeola), Blackwinged Kite (Elanus caeruleus), Mongolian Lark (Melanocorypha mongolica) and Crested Myna (Acridotheres cristatellus). One Ring-necked Duck was observed on March 23, 2014 in Jungrangcheon Stream. One male Lesser Scaup was recorded on February 24, 2014 in Gyeongpoho Lagoon. A male bufflehead was first seen in Yeongrangho Lagoon on January 26, 2013. The Black-winged Kite was first observed on January 23, 2013 at the Gangseo Wetland Ecological Park. One Mongolian Lark was also recorded on May 11, 2016 and May 12, 2017 in Marado Island. The Crested Myna was first observed on April 20, 2016 in Seomando, Island.

        • KCI등재

          Taxonomy of 16 indigenous ciliate species (Protozoa, Ciliophora) from South Korea

          김지혜,OMAR ATEF ISMAIL MOHAMED,문지혜,정재호 국립생물자원관 2020 Journal of species research Vol.9 No.4

          We collected indigenous Korean ciliate species from diverse aquatic and terrestrial habitats in 2018 and 2019. The morphology of these ciliates was revealed based on the observations of living cells, and protargol-impregnated and/or silver carbonate-impregnated specimens. During this study, we found 16 previously unrecorded Korean ciliate species, which are as follows: 1) class Heterotrichea - Stentor introversus; 2) class Spirotrichea - Aspidisca orthopogon, Amphisiella sinica, Epiclintes auricularis rarisetus, Apokeronopsis wrighti, Pseudokeronopsis carnea, Trachelostyla pediculiformis, Strombidium apolatum, and Varistrombidium kielum; 3) class Phyllopharyngea - Chlamydodon obliquus, Dysteria aculeata, and Hartmannula angustipilosa; 4) class Litostomatea - Paraspathidium apofuscum; and 5) class Oligohymenophorea - Frontonia angusta solea, Metanophrys sinensis, and Uronemita binucleata. Here, we provide a diagnosis for each species with a brief remark. Among them, the infraciliature of the poorly known species, Stentor introversus and Dysteria aculeata, is described for the first time. Further, we revise the Korean population of Pseudokeronopsis pararubra, which was previously misidentified as Pseudokeronopsis carnea.

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