Identification of novel rheumatoid arthritis-associated MiRNA-204-5p from plasma exosomes

Wu Long-Fei,Zhang Qin,Mo Xing-Bo,Lin Jun,Wu Yang-Lin,Lu Xin,He Pei,Wu Jian,Guo Yu-Fan,Wang Ming-Jun,Ren Wen-Yan,Deng Hong-Wen,Lei Shu-Feng,Deng Fei-Yan 생화학분자생물학회 2022 Experimental and molecular medicine Vol.54 No.-

Rheumatoid arthritis (RA) is an autoimmune disease characterized by infiltration of immune cells in the synovium. However, the crosstalk of immune cells and synovial fibroblasts is still largely unknown. Here, global miRNA screening in plasma exosomes was carried out with a custom microarray (RA patients vs. healthy controls = 9:9). A total of 14 exosomal miRNAs were abnormally expressed in the RA patients. Then, downregulated expression of exosomal miR-204-5p was confirmed in both the replication (RA patients vs. healthy controls = 30:30) and validation groups (RA patients vs. healthy controls = 56:60). Similar to the findings obtained in humans, a decreased abundance of exosomal miR-204-5p was observed in mice with collagen-induced arthritis (CIA). Furthermore, Spearman correlation analysis indicated that plasma exosomal miR-204-5p expression was inversely correlated with disease parameters of RA patients, such as rheumatoid factor, erythrocyte sedimentation rate, and C-reactive protein. In vitro, our data showed that human T lymphocytes released exosomes containing large amounts of miR-204-5p, which can be transferred into synovial fibroblasts, inhibiting cell proliferation. Overexpression of miR-204-5p in synovial fibroblasts suppressed synovial fibroblast activation by targeting genes related to cell proliferation and invasion. In vivo assays found that administration of lentiviruses expressing miR-204-5p markedly alleviated the disease progression of the mice with CIA. Collectively, this study identified a novel RA-associated plasma exosomal miRNA-204-5p that mediates the communication between immune cells and synovial fibroblasts and can be used as a potential biomarker for RA diagnosis and treatment.

A Novel Hybrid Intelligence Algorithm for Solving Combinatorial Optimization Problems

Wu Deng,Han Chen,He Li 한국정보과학회 2014 Journal of Computing Science and Engineering Vol.8 No.4

The ant colony optimization (ACO) algorithm is a new heuristic algorithm that offers good robustness and searching ability. With in-depth exploration, the ACO algorithm exhibits slow convergence speed, and yields local optimization solutions. Based on analysis of the ACO algorithm and the genetic algorithm, we propose a novel hybrid genetic ant colony optimization (NHGAO) algorithm that integrates multi-population strategy, collaborative strategy, genetic strategy, and ant colony strategy, to avoid the premature phenomenon, dynamically balance the global search ability and local search ability, and accelerate the convergence speed. We select the traveling salesman problem to demonstrate the validity and feasibility of the NHGAO algorithm for solving complex optimization problems. The simulation experiment results show that the proposed NHGAO algorithm can obtain the global optimal solution, achieve self-adaptive control parameters, and avoid the phenomena of stagnation and prematurity.

A Novel Hybrid Intelligence Algorithm for Solving Combinatorial Optimization Problems

Deng, Wu,Chen, Han,Li, He Korean Institute of Information Scientists and Eng 2014 Journal of Computing Science and Engineering Vol.8 No.4

The ant colony optimization (ACO) algorithm is a new heuristic algorithm that offers good robustness and searching ability. With in-depth exploration, the ACO algorithm exhibits slow convergence speed, and yields local optimization solutions. Based on analysis of the ACO algorithm and the genetic algorithm, we propose a novel hybrid genetic ant colony optimization (NHGAO) algorithm that integrates multi-population strategy, collaborative strategy, genetic strategy, and ant colony strategy, to avoid the premature phenomenon, dynamically balance the global search ability and local search ability, and accelerate the convergence speed. We select the traveling salesman problem to demonstrate the validity and feasibility of the NHGAO algorithm for solving complex optimization problems. The simulation experiment results show that the proposed NHGAO algorithm can obtain the global optimal solution, achieve self-adaptive control parameters, and avoid the phenomena of stagnation and prematurity.

Evaluation and Utilization of Xinjiang Melon (Cucumis melo ssp. melo) Germplasm Resources

Wu ming zhu,Yi hong ping,Feng jiong xin,Li jin song,Wang deng ming,Aken ya sheng,Zhang yong bing,Zhai wen qiang,Wu hai bo 한국원예학회 2006 한국원예학회 기타간행물 Vol.- No.-

RESEARCH ON A DYNAMIC E-COMMERCE APPLICATION ARCHITECTURE BASED ON SOA and Web Service

Wu Deng,Xinhua Yang,Huimin Zhao 한국멀티미디어학회 2006 한국멀티미디어학회 국제학술대회 Vol.2006 No.-

Web service is the kernel and key of the solutions of the new generation dynamic E-commerce and enterprise application integration (EAI), so the dynamic E-commerce is the goal of E-commerce development. SOA and web service can ensure a compatible information exchange and integration framework for the business process of the dynamic E-commerce, and it has led to a more complex type of web interaction and collaborations between enterprise trading partners, This paper discusses service-oriented architecture, web service and relating protocol standard. Finally, a dynamic E-commerce application architecture based on SOA and web Service is presented.

Study on A Fault Diagnosis Method of Rolling Element Bearing Based on Improved ACO and SVM Model

Wu Deng,Xiumei Li,Huimin Zhao 보안공학연구지원센터 2016 International Journal of Future Generation Communi Vol.9 No.3

The vibration signal is nonstationary and it is difficult to acquire the sample with typical fault. An improved ACO algorithm based on adaptive control parameters is introduced into SVM model to propose a new fault diagnosis (IMASFD) method in this paper. In the IMASFD method, the EMD method is used to decompose fault vibration signal into IMF components, the energy of IMF components is selected to construct the fault feature vectors. Then the adaptive controlling pheromone strategy, adaptive controlling stochastic selection threshold strategy and dynamic evaporation rate strategy are used to improve the basic ACO algorithm. The improved ACO algorithm is used to optimize the parameters of SVM model in order to obtain the optimal values of parameter combination in the SVM model. And a new fault diagnosis (IMASFD) method is proposed. Finally, the proposed IMASFD method is applied to the test data from bearing data center of CWRU. The experimental results show that the proposed method can accurately and effectively realize high precision fault diagnosis of rolling bearing, and has strong robustness and generalization ability, provides an effective method for realizing fault diagnosis of rolling bearing.

ZNF552, a novel human KRAB/C2H2 zinc finger protein, inhibits AP-1- and SRE-mediated transcriptional activity

( Yun Deng ),( Bi Sheng Liu ),( Xiong Wei Fan ),( Yue Qun Wang ),( Ming Tang ),( Xiao Yang Mo ),( Yong Qing Li ),( Zao Chu Ying ),( Yong Qi Wan ),( Na Luo ),( Jun Mei Zhou ),( Xiu Shan Wu ),( Wu Zhou 한국생화학분자생물학회 (구 한국생화학회) 2010 BMB Reports Vol.43 No.3

In this study, we report the identification and characterization of a novel C2H2 zinc finger protein, ZNF552, from a human embryonic heart cDNA library. ZNF552 is composed of three exons and two introns and maps to chromosome 19q13.43. The cDNA of ZNF552 is 2.3 kb, encoding 407 amino acids with an amino-terminal KRAB domain and seven carboxyl-terminal C2H2 zinc finger motifs in the nucleus and cytoplasm. Northern blotting analysis indicated that a 2.3 kb transcript specific for ZNF552 was expressed in liver, lung, spleen, testis and kidney, especially with a higher level in the lung and testis in human adult tissues. Reporter gene assays showed that ZNF552 was a transcriptional repressor, and overexpression of ZNF552 in the COS-7 cells inhibited the transcriptional activities of AP-1 and SRE, which could be relieved through RNAi analysis. Deletion studies showed that the KRAB domain of ZNF552 may be involved in this inhibition. [BMB reports 2010; 43(3): 193-198]

Genetic Analysis of Seed Number per Pod in Brassica napus Using Augmented North Carolina (NC) 2

Li Wu Zhang,Ping Wu Liu,Deng Feng Hong,Guang Sheng Yang 한국유전학회 2008 Genes & Genomics Vol.30 No.3

Seed number per pod is one of the three important components of yield in rapeseed. An experiment with the augmented NCⅡ design was conducted for investigating the heterosis, combining ability and genetic model of this trait. Results revealed that this trait was fitted with additive-dominance genetic model by using the variance analysis of ( Wr + Vr) and (Wr - Vr). Higher general predictability ratio (0.693) supported that both additive and non-additive genes governed this trait. The moderate estimates of narrow-sense heritability (0.588) further confirmed this. The gene distribution estimates indicated the occurrence of asymmetry. At least one major group of genes controlled the inheritance of this trait. Per se performance of parents is a reflection of their "gca" (general combining ability) effects in most F1s. Among the genotypes Y106 ranked as the top general combiner followed by HZ398 and HZ396. High estimates of mid-parent heterosis and potential ratio were observed in HZ398/Y106, indicating that it would be worthwhile to utilize these diverse genotypes as parents for the development of improved hybrids or segregants.

Dynamic characteristics of the cavitation clouds of submerged Helmholtz self-sustained oscillation jets from high-speed photography

Qiang Wu,Wei Wei,Bo Deng,Pan Jiang,Deng Li,Mengda Zhang,Zhenlong Fang 대한기계학회 2019 JOURNAL OF MECHANICAL SCIENCE AND TECHNOLOGY Vol.33 No.2

Experiments were conducted to investigate the cavitation behavior of Helmholtz self-sustained oscillation jets. In this paper, highspeed photographic technology was used to capture the flow details of cavitation with various nozzle structures and operating pressures from 1.0 MPa to 3.0 MPa. Furthermore, an in-house code based on a matrix approach that processes gray values with various statistical methods was used to quantitatively evaluate the cavitation jet of waters generated by Helmholtz nozzles. The mean values of the normalized gray levels of the images were used as a metric to measure the lengths of the cavitation clouds. When the original data were smoothed by a 15th lowess filter to exclude the noise of the images, the periods of cavitation cloud shedding were obtained accordingly, and the average period had a magnitude of 10 -4 . All of the smoothed results of the original data captured a two-peak shape that comprises a large peak and a mild hump. Image processing results showed that the Helmholtz nozzle produced greater cavitation intensity than a traditional conical nozzle. The shear-layer instability waves disappeared within 10d 1 downstream from the injector exit. The cavitation clouds propagated a distance of approximately 1–10d 1 at various pressure ratios, and the clouds were continuous within this distance. The geometry of the nozzle strongly affected the length and shedding period of the cavitation cloud. As described in the discussion section of this paper, when the cavity length was doubled, the length of the cavitation cloud decreased approximately 26.5 %; however, the period of the cavitation cloud shedding increased approximately 10 %. The longest cavitation cloud appeared when the ratio of the cavity diameter and the upper nozzle diameter was eight. Excessively small or large diameters were not conducive to the development of cavitation, whereas the effect of the pressure ratio on the cavitation cloud length was positive. When other conditions remained unchanged, the lump shedding period decreased as the pressure ratio was increased to 25. When the pressure ratio exceeded 25, the cavitation cloud shedding period remained constant.

Synergistic efficacy of LBH and αB-crystallin through inhibiting transcriptional activities of p53 and p21

( Yun Deng ),( Yong Qing Li ),( Xiong Wei Fan ),( Wu Zhou Yuan ),( Hua Ping Xie ),( Xiao Yang Mo ),( Yan Yan ),( Jun Mei Zhou ),( Yue Qun Wang ),( Xian Li Ye ),( Yong Qi Wan ),( Xiu Shan Wu ) 생화학분자생물학회 (구 한국생화학분자생물학회) 2010 BMB Reports Vol.43 No.6

LBH is a transcription factor as a candidate gene for CHD associated with partial trisomy 2p syndrome. To identify potential LBH-interacting partners, a yeast two-hybrid screen using LBH as a bait was performed with a human heart cDNA library. One of the clones identified encodes αB-crystallin. Co-immunoprecipitation and GST pull-down assays showed that LBH interacts with αB-crystallin, which is further confirmed by mammalian two-hybrid assays. Co-localization analysis showed that in COS-7 cells, αB-crystallin that is cytoplasmic alone, accumulates partialy in the nucleus when co-transfected with LBH. Transient transfection assays indicated that overexpression of LBH or αB-crystallin reduced the transcriptional activities of p53 and p21, respectively, Overexpression of both αB-crystallin and LBH together resulted in a stronger repression of the transcriptional activities of p21 and p53. These results showed that the interaction of LBH and αB-crystallin may inhibit synergistically the transcriptional regulation of p53 and p21. [BMB reports 2010; 43(6): 432-437]