캐나다 옥수수 자식계통들에 대한 유전적 다양성 및 집단구조 분석

홍탁기,사규진,이주경 한국육종학회 2017 한국육종학회지 Vol.49 No.2

We collected 32 maize inbred lines from eastern cereal and oilseed research center in Canada to develop new maize varieties. We also evaluated genetic diversity, genetic relationships, and population structure using 35 SSR markers. A total of 269 alleles were revealed in 35 loci with an average of 7.69 and a range between 3 and 15 alleles per locus. The genetic diversity values varied from 0.176 to 0.889 with an average of 0.691. The polymorphic information content varied from 0.171 to 0.879 with an average of 0.659. Population structure analysis indicated that 32 Canadian maize inbred lines comprised four major groups and one admixed group based on a membership probability threshold of 0.80. The four major groups contained 13, 2, 5 and 2 maize inbred lines, respectively. From genetic relationships analysis, the all inbred lines were divided into three main groups at 26% genetic similarity. Group I included 22 inbred lines, and Group II included 9 inbred lines. Group III consist of only one inbred line. The results in this study would be useful for the improvement and development of new cultivars, planning crosses for hybrids or development of inbred line in maize breeding program

들깨, 차조기 작물의 수확 후 저장 기간에 따른 종자 발아 변이

사규진,홍탁기,박대현,이주경 한국작물학회 2018 한국작물학회지 Vol.63 No.1

The present study aimed to understand the variation in seed germination according to the storage period after harvest in the accessions of cultivated and weedy types of Perilla species in Korea. In this milieu, we investigated the germination rate and germination energy of 59 Perilla accessions (15 cultivated var. frutescens type I, 4 cultivated var. frutescens type II, 20 weedy var. frutescens, and 20 weedy var. crispa), which were harvested in autumn 2016. The accessions of cultivated var. frutescens (type I) showed an average germination rate of 80.8% 6 months after harvest; however, the accessions of weedy var. frutescens and var. crispa showed an average germination rate of 0.9% and 8.7%, respectively. Furthermore, the accessions of cultivated var. frutescens (type II) showed an average germination rate of 18.2%. The accessions of cultivated var. frutescens (type I) showed an average germination energy of 75.8%, while the accessions of weedy var. frutescens and var. crispa showed an average germination energy of 0.6% and 6.9%, respectively. In addition, the accessions of cultivated var. frutescens (type II) showed an average germination energy of 14.3%. The germination rate and germination energy for the accessions of cultivated and weedy types of Perilla species increased marginally at 2 months from the first month after harvest. However, it did not significantly increase until six months after that. According to our results, there are two types of cultivated var. frutescens, namely, type I, which showed high germination rate and germination energy, and type II, which showed low germination rate and germination energy. The results of this study will provide basic information to understand variations in the germination of seeds during 6 months of storage period after harvest in the accessions of cultivated and weedy types of Perilla species in Korea. 우리나라에서 수집한 들깨와 차조기의 재배형 및 잡초형 계통들에 대하여 수확 이후 저장기간에 따른 종자발아율 변이를 이해하기 위하여 2016년 가을에 수확한 59개의 들깨, 차조기의 재배형 및 잡초형 계통(재배형 들깨 Type I 15계통, 재배형들깨 Type II 4계통, 잡초형 들깨 20계통, 잡초형 차조기 20계통)들에 대하여 발아율 및 발아세 조사를 하였다. 수확 후 6개월 동안의 들깨와 차조기의 재배형 및 잡초형 계통들에 대한발아율 조사에서 재배형 들깨(Type I)의 계통들은 평균 80.8% 의 발아율을 보였으나, 들깨와 차조기의 잡초형들은 평균0.9%와 8.7%의 발아율을 보였다. 또한 재배형 들깨(Type II) 의 계통들도 평균 18.2%의 발아율을 보였다. 그리고 발아세의경우도 재배형 들깨(Type I)의 계통들은 평균 75.8%를 보였으나, 들깨와 차조기의 잡초형들은 평균 0.6%와 6.9%를 보였으며, 재배형 들깨(Type II)의 계통들도 평균 14.3%를 보였다. 그 결과 들깨, 차조기의 재배형 및 잡초형 계통들은 수확 후 1 개월째보다 2개월째에서 발아율 및 발아세가 다소 증가한 것으로 보였으나, 그 이후부터 6개월째까지는 크게 증가하지 않는 것으로 보였다. 이상의 결과에 의하면, 재배형 들깨의 경우는 2가지 Type, 즉 발아율이 높은 Type I과 낮은 Type II가 존재하는 것으로 밝혀졌으며, 차조기의 재배형 및 잡초형 계통들은 모두 발아율이 낮은 것으로 밝혀졌다. 본 연구결과는 오늘날 우리나라에서 재배되고 있는 들깨와 차조기 작물의 재배형 및 잡초형 계통들에 대하여 수확 후 6개월까지 저장기간에따른 종자발아 변이를 이해하는데 기초정보를 제공할 것으로생각된다.

Genetic diversity and population structure analysis in Perilla crop and their weedy types from northern and southern areas of China based on simple sequence repeat (SSRs)

Shi Jun Ma,사규진,홍탁기,이주경 한국유전학회 2019 Genes & Genomics Vol.41 No.3

Introduction Identification of genetic variation is an essential ability for the long-term success of breeding programs and maximizes the use of germplasm resources. In East Asia, China has a long history of the cultivation of Perilla crop, but there has been little research on the genetic diversity and genetic relationships among accessions of Perilla crop and their weedy types. Objectives To better understand the genetic variations of the cultivated and weedy types of Perilla crop in China, the 91 accessions were evaluated for genetic diversity by 21 simple sequence repeat (SSR) markers. Methods SSR amplifications were conducted in a total volume of 20 μL, consisting of 20 ng genomic DNA, 1X PCR buffer, 0.5 μM forward and reverse primers, 0.2 mM dNTPs, and 1 U Taq polymerase. Power Marker version 3.25 was applied to obtain the information on the number of alleles, allele frequency, major allele frequency, gene diversity (GD), and polymorphic information content (PIC). The similarity matrix was used to construct an unweighted pair group method with arithmetic mean dendrogram by the application of SAHN-Clustering from NTSYS-pc.V.2.1. Results A total of 147 alleles were identified with an average of 7 alleles per locus. The average values of PIC and GD were 0.577 and 0.537, respectively. The genetic diversity level of accessions from Northern China was lower than accessions from Southern China. The genetic diversity level and PIC values for accessions of var. crispa were the highest. For accessions of cultivated var. frutescens, genetic diversity in Southern China was higher than that in Northern China. Conclusion Most cultivated Perilla accessions were clearly separated from weedy Perilla accessions, but there was no clear geographic structure between cultivated Perilla crop and weedy types based on their regional distribution. This study demonstrated the utility of SSR analysis for performing genetic and population analysis of cultivated and weedy types of Perilla accessions in China.

핵심집단 육성을 위한 옥수수 계통의 형태적 특성 연구

김오겸(O Gyeom Kim),홍탁기(Tak Ki Hong),고우리(Woo Ri Ko),우수연(Su Yeon Woo),마슐쥔(Shi Jun Ma),박종원(Jong Won Park),사규진(Kyu Jin Sa),이주경(Ju Kyong Lee) 한국육종학회 2016 한국육종학회지 Vol.48 No.2

In order to develop a core set and new corn variety in Korea, we evaluated the morphological characteristics of 194 maize accessions by examining eight quantitative characteristics. On the evaluation of quantitative traits for 194 maize accessions, they showed the morphological variations in tassel length (35.1±5.0 cm), plant height (226.1±33.7 cm), ear height (86.3±22.6cm), stem diameter (2.3±0.6 cm), leaf width (9.3±1.1 cm), ear length (14.5±2.4 cm), ear row number (14.1±1.9 row), and 100 kernel weight (24.9±4.4 g). The results of principal component analysis (PCA) indicated that the tassel length, plant height, and ear height greatly contributed to positive direction on the first principal component axis. One-hundred kernel weight contributed to negative direction on the second principal component axis. Thus these morphological characteristics, which contributed greatly in the first and second principal components, might be useful for discrimination among 194 maize accessions. In our study, seven accessions, such as IT026357, IT026441, IT027321, IT033271, IT033591, IT033597 and IT124273, particularly were measured high on yield-related traits. Consequently, the 194 maize accessions used in this study could be used as promising materials for maize breeding programs such as development of new hybrid in Korea.