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Jiang, Shenghua,Lee, Ji-Hoon,Kim, Donghun,Kanaly, Robert A.,Kim, Min-Gyu,Hur, Hor-Gil American Chemical Society 2013 Environmental science & technology Vol.47 No.15
<P>Arsenic immobilization and release in the environment is significantly influenced by bacterial oxidation and reduction of arsenic and arsenic-bearing minerals. In this study, we tested three iron-reducing bacteria, Shewanella oneidensis MR-1, Shewanella sp. HN-41, and Shewanella putrefaciens 200, which have diverse arsenate-reducing activities with regard to reduction of an As-bearing ferrihydrite slurry. In the cultures of S. oneidensis MR-1 and Shewanella sp. HN-41, which are not capable of respiratory reduction of As(V) to As(III), arsenic was maintained predominantly in its pentavalent form, existing in particulate poorly crystalline As-bearing ferrihydrite and formed small quantities of a stable ferrous arsenate [Fe<SUB>3</SUB>(AsO<SUB>4</SUB>)<SUB>2</SUB>] precipitate. However, in the culture of the As(V) reducer, S. putrefaciens 200, As(V) was reduced to As(III) and a small fraction of As-bearing ferrihydrite was transformed into ribbon-shaped siderite that subsequently re-released arsenic into the liquid phase. Our results indicated that release of arsenic and formation of diverse secondary nanoscale Fe–As minerals are specifically closely related to the arsenic-reducing abilities of different bacteria. Therefore, bacterial arsenic reduction appears to significantly influence As mobilization in soils, minerals, and other Fe-rich environments.</P><P><B>Graphic Abstract</B> <IMG SRC='http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/esthag/2013/esthag.2013.47.issue-15/es400534z/production/images/medium/es-2013-00534z_0006.gif'></P><P><A href='http://pubs.acs.org/doi/suppl/10.1021/es400534z'>ACS Electronic Supporting Info</A></P>
Origin of Improved Photoelectrochemical Water Splitting in Mixed Perovskite Oxides
Li, Weiwei,Jiang, Kai,Li, Zhongguo,Gong, Shijing,Hoye, Robert L. Z.,Hu, Zhigao,Song, Yinglin,Tian, Chuanmu,Kim, Jongkyoung,Zhang, Kelvin H. L.,Cho, Seungho,MacManus-Driscoll, Judith L. Wiley (John WileySons) 2018 ADVANCED ENERGY MATERIALS Vol.8 No.31
Lane Samantha R.,Sewell Robert D.E.,Jiang Robert The Korean Fiber Society 2006 Fibers and polymers Vol.7 No.1
It has been reported for several decades that microbes, which naturally contaminate cotton fibres during crop growth and subsequent storage can have an adverse effect on the structural quality of cotton lint. Although several studies have analysed the relationship between numbers of Gram-negative bacteria or bacterial endotoxin and particular physical properties, these studies have been limited to cotton from the United States, and the possible effects of fungal contamination have not been examined in detail. This study quantified the Gram-negative bacteria and fungal cells, as well as measuring concentrations of bacterial endotoxin and fungal glucan, on cotton lint samples from international sources. Spearman's rank correlation coefficients calculated between these results and quality data analysed by an automated testing instrument revealed several significant correlations. Findings included inverse correlations between the biological contamination parameters and fibre elongation, micronaire and reflectance. The possible causes and implications of these findings were also discussed.
Transcriptional elongation factor Paf1 core complex adopts a spirally wrapped solenoidal topology
Deng, Pujuan,Zhou, Yuqiao,Jiang, Junyi,Li, Haojie,Tian, Wei,Cao, Yinghua,Qin, Yan,Kim, Jaehoon,Roeder, Robert G.,Patel, Dinshaw J.,Wang, Zhanxin National Academy of Sciences 2018 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF Vol.115 No.40
<▼1><P><B>Significance</B></P><P>The polymerase-associated factor 1 (PAF1) complex is a general transcription elongation factor of RNA polymerase II, which not only regulates various stages of the transcription cycle but also broadly influences gene expression through modulating chromatin structure and/or recruiting other transcription-related factors. This study presents a high-resolution crystal structure of the core region of the Paf1-Ctr9-Cdc73 ternary complex, which not only greatly facilitates our understanding of the overall architecture of the Paf1 complex but also provides a structure-based platform for understanding the molecular mechanism underlying the role of the Paf1 complex in regulating gene expression and sheds light toward deciphering the impact of its mutational spectrum on human diseases.</P></▼1><▼2><P>The polymerase-associated factor 1 (Paf1) complex is a general transcription elongation factor of RNA polymerase II, which is composed of five core subunits, Paf1, Ctr9, Cdc73, Leo1, and Rtf1, and functions as a diverse platform that broadly affects gene expression genome-wide. In this study, we solved the 2.9-Å crystal structure of the core region composed of the Ctr9-Paf1-Cdc73 ternary complex from a thermophilic fungi, which provides a structural perspective of the molecular details of the organization and interactions involving the Paf1 subunits in the core complex. We find that Ctr9 is composed of 21 tetratricopeptide repeat (TPR) motifs that wrap three circular turns in a right-handed superhelical manner around the N-terminal region of an elongated single-polypeptide–chain scaffold of Paf1. The Cdc73 fragment is positioned within the surface groove of Ctr9, where it contacts mainly with Ctr9 and minimally with Paf1. We also identified that the Paf1 complex preferentially binds single-strand–containing DNAs. Our work provides structural insights into the overall architecture of the Paf1 complex and paves the road forward for understanding the molecular mechanisms of the Paf1 complex in transcriptional regulation.</P></▼2>
Ephraim P. Lansky,Wenguo Jiang,James Kumi-Diaka,Martin Albrecht,Lyndon M. Gommersall,Amit Patel,Robert E. Mansel,Ishak Neeman,Albert A. Geldof,Moray J. Campbell 한국식품영양과학회 2004 Journal of medicinal food Vol.7 No.3
We completed a multicenter study of the effects of pomegranate cold-pressed (Oil) or supercritical CO2-extracted (S) seed oil, fermented juice polyphenols (W), and pericarp polyphenols (P) on human prostate cancer cell xenograft growth in vivo, and/or proliferation, cell cycle distribution, apoptosis, gene expression, and invasion across Matrigel, in vitro. Oil, W, and P each acutely inhibited in vitro proliferation of LNCaP, PC-3, and DU 145 human cancer cell lines. The dose of P required to inhibit cell proliferation of the prostate cancer cell line LNCaP by 50% (ED50) was 70 mg/mL, whereas normal prostate epithelial cells (hPrEC) were significantly less affected (ED50 5 250 mg/mL). These effects were mediated by changes in both cell cycle distribution and induction of apoptosis. For example, the androgen-independent cell line DU 145 showed a significant increase from 11% to 22% in G2/M cells (P , .05) by treatment with Oil (35 mg/mL) with a modest induction of apoptosis. In other cell lines/treatments, the apoptotic response predominated, for example, in PC-3 cells treated with P, at least partially through a caspase 3-mediated pathway. These cellular effects coincided with rapid changes in mRNA levels of gene targets. Thus, 4-hour treatment of DU 145 cells with Oil (35 mg/mL) resulted in significant 2.3 6 0.001-fold (mean 6 SEM) up-regulation of the cyclin-dependent kinase inhibitor p21(waf1/cip1) (P , .01) and 0.6 6 0.14-fold down-regulation of c-myc (P , .05). In parallel, all agents potently suppressed PC-3 invasion through Matrigel, and furthermore P and S demonstrated potent inhibition of PC-3 xenograft growth in athymic mice. Overall, this study demonstrates significant antitumor activity of pomegranate-derived materials against human prostate cancer.
Park, Chang Ook,Fu, Xiujun,Jiang, Xiaodong,Pan, Youdong,Teague, Jessica E.,Collins, Nicholas,Tian, Tian,O'Malley, John T.,Emerson, Ryan O.,Kim, Ji Hye,Jung, Yookyung,Watanabe, Rei,Fuhlbrigge, Robert C Elsevier 2018 The Journal of allergy and clinical immunology Vol.142 No.2
<P><B>Background</B></P> <P> <I>Candida albicans</I> is a dimorphic fungus to which human subjects are exposed early in life, and by adulthood, it is part of the mycobiome of skin and other tissues. Neonatal skin lacks resident memory T (T<SUB>RM</SUB>) cells, but in adults the <I>C albicans</I> skin test is a surrogate for immunocompetence. Young adult mice raised under specific pathogen-free conditions are naive to <I>C albicans</I> and have been shown recently to have an immune system resembling that of neonatal human subjects.</P> <P><B>Objective</B></P> <P>We studied the evolution of the adaptive cutaneous immune response to <I>Candida</I> species.</P> <P><B>Methods</B></P> <P>We examined both human skin T cells and the <I>de novo</I> and memory immune responses in a mouse model of <I>C albicans</I> skin infection.</P> <P><B>Results</B></P> <P>In mice the initial IL-17–producing cells after <I>C albicans</I> infection were dermal γδ T cells, but by day 7, αβ T<SUB>H</SUB>17 effector T cells were predominant. By day 30, the majority of <I>C albicans</I>–reactive IL-17–producing T cells were CD4 T<SUB>RM</SUB> cells. Intravital microscopy showed that CD4 effector T cells were recruited to the site of primary infection and were highly motile 10 days after infection. Between 30 and 90 days after infection, these CD4 T cells became increasingly sessile, acquired expression of CD69 and CD103, and localized to the papillary dermis. These established T<SUB>RM</SUB> cells produced IL-17 on challenge, whereas motile migratory memory T cells did not. T<SUB>RM</SUB> cells rapidly clear an infectious challenge with <I>C albicans</I> more effectively than recirculating T cells, although both populations participate. We found that in normal human skin IL-17–producing CD4<SUP>+</SUP> T<SUB>RM</SUB> cells that responded to <I>C albicans</I> in an MHC class II–restricted fashion could be identified readily.</P> <P><B>Conclusions</B></P> <P>These studies demonstrate that <I>C albicans</I> infection of skin preferentially generates CD4<SUP>+</SUP> IL-17–producing T<SUB>RM</SUB> cells, which mediate durable protective immunity.</P>
Bhuiyan, Maruf A.,Zhou, Hong,Chang, Sung-Jae,Lou, Xiabing,Gong, Xian,Jiang, Rong,Gong, Huiqi,Zhang, En Xia,Won, Chul-Ho,Lim, Jong-Won,Lee, Jung-Hee,Gordon, Roy G.,Reed, Robert A.,Fleetwood, Daniel M. Professional Technical Group on Nuclear Science 2018 IEEE transactions on nuclear science Vol.65 No.1
<P>The radiation hardness of AlGaN/GaN high-electron-mobility transistors (HEMTs) is found to improve with increasing GaN channel thickness. Epitaxial MgCaO shows promise as a radiation-tolerant gate dielectric, with only small shifts in operating parameters of metal–oxide–semiconductor HEMTs observed at doses up to 1 Mrad(SiO<SUB><I>2</I></SUB>). Bias-induced electron trapping and radiation-induced-hole trapping can occur in the MgCaO, depending on the applied bias during stress and/or irradiation. AC transconductance measurements are used to help understand charge trapping in these devices.</P>
Ahn, Gyeongik,Kim, Hyeran,Kim, Dae Heon,Hanh, Hong,Yoon, Youngdae,Singaram, Indira,Wijesinghe, Kaveesha J.,Johnson, Kristen A.,Zhuang, Xiaohong,Liang, Zizhen,Stahelin, Robert V.,Jiang, Liwen,Cho, Wonh Americ 2017 The Plant cell Vol.29 No.6
<P>During cytokinesis in plants, trans-Golgi network-derived vesicles accumulate at the center of dividing cells and undergo various structural changes to give rise to the planar cell plate. However, how this conversion occurs at the molecular level remains elusive. In this study, we report that SH3 Domain-Containing Protein 2 (SH3P2) in Arabidopsis thaliana plays a crucial role in converting vesicles to the planar cell plate. SH3P2 RNAi plants showed cytokinesis-defective phenotypes and produced aggregations of vesicles at the leading edge of the cell plate. SH3P2 localized to the leading edge of the cell plate, particularly the constricted or curved regions of the cell plate. The BAR domain of SH3P2 induced tubulation of vesicles. SH3P2 formed a complex with dynamin-related protein 1A (DRP1A) and affected DRP1A accumulation to the cell plate. Based on these results, we propose that SH3P2 functions together with DRP1A to convert the fused vesicles to tubular structures during cytokinesis.</P>