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Xue‑Lian Song,Fei‑Fei Zhang,Wen‑Jing Wang,Xin‑Ning Li,Yi Dang,Ying‑Xiao Li,Qian Yang,Mei‑Jing Shi,Xiao‑Yong Qi 한국유전학회 2020 Genes & Genomics Vol.42 No.12
Background: Myocardial ischemia and reperfusion injury (MI/RI) is a complex pathophysiological process, which can lead to severe myocardial injury. The long noncoding RNA alpha-2-macroglobulin antisense RNA 1 (A2M-AS1) has been revealed to be abnormally expressed in MI, However, its function in MI and the potential mechanism are still unclear. Objective: To evaluate the functional role of A2M-AS1 in hypoxia/reoxygenation (H/R)-induced neonatal cardiomyocytes and its potential molecular mechanism. Methods: Dataset GSE66360 was obtained from GEO database for analyzing the RNA expression of A2M-AS1 and interleukin 1 receptor type 2 (IL1R2). KEGG pathway enrichment analysis of the genes that co-expressed with A2M-AS1 was performed. Human neonatal cardiomyocytes were subjected to H/R to construct in vitro models. QRT-PCR and Western blot were adopted to test the levels of mRNA and protein. The viability and apoptosis of cardiomyocytes were tested by CCK-8 and flow cytometry assays, respectively. Results: The expression of A2M-AS1 was notably downregulated in H/R-treated cardiomyocytes. Overexpression of A2M-AS1 can notably enhance the cell viability of H/R-damaged cardiomyocytes, whereas knockdown of A2M-AS1 showed the opposite outcomes. Besides, a negative correlation was showed between A2M-AS1 and IL1R2 expression. In H/R-treated cardiomyocytes, overexpression of IL1R2 weakened the promoting proliferation and anti-apoptosis effects caused by overexpressing A2M-AS1, however, IL1R2-knockdown abolished the anti-proliferation and pro-apoptosis effects caused by silencing A2M-AS1. Conclusion: This study demonstrates the potential regulatory role of A2M-AS1/ IL1R2 axis in cardiomyocytes suffered from H/R, and provides insight into the protection of MI/RI.
( Xue-mei Jin ),( Yong-keun Chang ),( Jae Hag Lee ),( Soon-kwang Hong ) 한국미생물생명공학회(구 한국산업미생물학회) 2017 Journal of microbiology and biotechnology Vol.27 No.10
Most of the biosynthetic pathways for secondary metabolites are influenced by carbon metabolism and supply of cytosolic NADPH. We engineered carbon distribution to the pentose phosphate pathway (PPP) and redesigned the host to produce high levels of NADPH and primary intermediates from the PPP. The main enzymes producing NADPH in the PPP, glucose 6-phosphate dehydrogenase (encoded by zwf1 and zwf2) and 6-phosphogluconate dehydrogenase (encoded by zwf3), were overexpressed with opc encoding a positive allosteric effector essential for Zwf activity in various combinations in Streptomyces lividans TK24. Most S. lividans transformants showed better cell growth and higher concentration of cytosolic NADPH than those of the control, and S. lividans TK24/pWHM3-Z23O2 containing zwf2+zwf3+opc2 showed the highest NADPH concentration but poor sporulation in R2YE medium. S. lividans TK24/pWHM3-Z23O2 in minimal medium showed the maximum growth (6.2 mg/ml) at day 4. Thereafter, a gradual decrease of biomass and a sharp increase of cytosolic NADPH and sedoheptulose 7-phosphate between days 2 and 4 and between days 1 and 3, respectively, were observed. Moreover, S. lividans TK24/pWHM3-Z23O2 produced 0.9 times less actinorhodin but 1.8 times more undecylprodigiosin than the control. These results suggested that the increased NADPH concentration and various intermediates from the PPP specifically triggered undecylprodigiosin biosynthesis that required many precursors and NADPH-dependent reduction reaction. This study is the first report on bespoke metabolic engineering of PPP routes especially suitable for producing secondary metabolites that need diverse primary precursors and NADPH, which is useful information for metabolic engineering in Streptomyces.
Anomalous Dependence of Population Growth on the Birth Rate in the Plant-herbivore System
Xue-Mei Cui,한승기,Jean S. Chung 한국물리학회 2010 THE JOURNAL OF THE KOREAN PHYSICAL SOCIETY Vol.57 No.6
We performed a simulation of the two-species plant-herbivore system by using the agent-based NetLogo program and constructed a dynamic model of populations consistent with the simulation results. The dynamic model is a three-dimensional system including the mean energy of the herbivore in addition to two variables denoting the populations of plants and herbivores. A steady-state analysis of the dynamic model shows that the dependence of the herbivore population on the birth and the death rates observed from the agent model is consistent with the prediction of the dynamic model. Especially, the anomalous dependence of the herbivore population on the birth rate, where the population decreases with the birth rate for small death rate, is consistently explained by a phase plane analysis of the dynamic model.
Enzyme-Catalyzed Henry Reaction in Choline Chloride-Based Deep Eutectic Solvents
( Xue Mei Tian ),( Suo Qin Zhang ),( Liang Yu Zheng ) 한국미생물 · 생명공학회 2016 Journal of microbiology and biotechnology Vol.26 No.1
The enzyme-catalyzed Henry reaction was realized using deep eutectic solvents (DESs) as a reaction medium. The lipase from Aspergillus niger (lipase AS) showed excellent catalytic activity toward the substrates aromatic aldehydes and nitromethane in choline chloride:glycerol at a molar ratio of 1:2. Addition of 30 vol% water to DES further improved the lipase activity and inhibited DES-catalyzed transformation. A final yield of 92.2% for the lipase AS-catalyzed Henry reaction was achieved under optimized reaction conditions in only 4 h. In addition, the lipase AS activity was improved by approximately 3-fold in a DES.water mixture compared with that in pure water, which produced a final yield of only 33.4%. Structural studies with fluorescence spectroscopy showed that the established strong hydrogen bonds between DES and water may be the main driving force that affects the spatial conformation of the enzyme, leading to a change in lipase activity. The methodology was also extended to the aza-Henry reaction, which easily occurred in contrast to that in pure water. The enantioselectivity of both Henry and aza-Henry reactions was not found. However, the results are still remarkable, as we report the first use of DES as a reaction medium in a lipase-catalyzed Henry reaction.
Xue-Mei Jin,이중엽,최남경,성종미,신주영,김예지,김미숙,양보람,박병주 대한의학회 2014 Journal of Korean medical science Vol.29 No.2
This study was conducted to investigate disease-modifying antirheumatic drug (DMARD) utilization in Korean elderly patients with rheumatoid arthritis (RA). We used data from January 1, 2005 to June 30, 2006 from the Health Insurance Review and Assessment Service claims database. The study subjects were defined as patients aged 65 yr or older with at least two claims with a diagnosis of RA. DMARD use was compared by the patients’ age-group, gender, medical service, and geographic divisions. The patterns of DMARD use in mono- and combination therapy were calculated. RA medication use was calculated by the number of defined daily doses (DDD)/1,000 patients/day. A total of 166,388 patients were identified during the study period. DMARD use in RA patients was 12.0%. The proportion of DMARD use was higher in the younger elderly, females, and patients treated in big cities. Hydroxychloroquine was the most commonly used DMARD in monotherapy, and most of the combination therapies prescribed it with methotrexate. DMARD use in elderly RA patients was noticeably low, although drug prescriptions showed an increasing trend during the study period, clinicians may need to pay more attention to elderly RA patients.
( Xue Mei Li ),( Chang Hyeon Kim ),( Dong Kyun Hong ),( Kyoung Eun Jung ),( Chong Won Choi ),( Young Lee ),( Chang Deok Kim ),( Young-joon Seo ) 대한피부과학회 2019 대한피부과학회 학술발표대회집 Vol.71 No.2
Background: Kruppel-like factor 4 (KLF4) is a zinc -finger transcription factor that plays a role in terminal differentiation of epidermal keratinocytes. There are conflicting reports regarding the role of KLF4 in tumor development, with both the tumor suppressive and/or oncogenic properties depending on different conditions and cell types. Objectives: In this study, we investigated the functional importance of KLF4 in cutaneous squamous cell carcinoma (SCC). Methods: To examine the effects of KFL4, we transduced SCC lines (SCC12 and SCC13 cells) with the KLF4- expressing recombinant adenovirus. Results: Immunohistochemistry showed that KLF4 expression was relatively low in SCC lesion compared to normal epidermis. Overexpression of KLF4 significantly decreased cell proliferation and colony forming activity. In addition, overexpression of KLF4 markedly reduced invasive potential, along with the down-regulation of epithelial-mesenchymal transition (EMT)-related molecules. In a mechanistic study, KLF4 inhibited SOX2, of which expression is critical for tumor initiation and growth of SCC. Further investigations indicated that SOX2 expression is induced by TGF-β /SMAD signaling, and that overexpression of KLF4 inhibited SMAD signaling via up-regulation of SMAD7, an important inhibitory SMAD molecule. Conclusion: Based on these data, KLF4 plays a tumor suppressive role in cutaneous SCC cells.
Xue Mei Quan,Ying Dan Liu,Wha-Seung Ahn,Hyoung Jin Choi IEEE 2013 IEEE transactions on magnetics Vol.49 No.7
<P>A magnetorheological (MR) fluid, composed of soft magnetic carbonyl iron (CI) particles dispersed in a nonmagnetic carrier fluid, was prepared with an additive of nanoporous Fe-MCM-22 particles. Fe-MCM-22 was synthesized by a hydrothermal method and was used to prevent fast settling of the CI particles in the MR fluid system. Two MR fluids comprised of the same CI particles in 25% volume fraction were prepared, but one having additional 5 wt% Fe-MCM-22 according to the carrier fluid weight. Performance of these MR fluids, including shear stress, shear viscosity and yield stress, were measured using a rotational parallel disk rheometer in a steady flow. Suspension stability and magnetic properties were also examined by a Turbiscan apparatus and a vibrating sample magnetometer, respectively. The addition of Fe-MCM-22 into the CI suspension was found to improve not only MR properties including field dependent yield stress, but also dispersion stability of the suspension.</P>