Analysis of genetic diversity among indigenous landraces from sesame (Sesamum indicum L.) core collection in China as revealed by SRAP and SSR markers

Yan‐xin Zhang,Wei Hua,Lin‐han Wang,Zhuo Che,Xiu‐rong Zhang 한국유전학회 2010 Genes & Genomics Vol.32 No.3

The molecular genetic diversity of 404 indigenous landraces from sesame core collection in China were evaluated by 11SRAP and 3 SSR markers, 175 fragments were generated, of which 126 were polymorphic with an average polymorphism rate of 72%. Jaccard’s genetic similarity coefficients (GS=0.7130), Nei's gene diversity (h=0.2418) and Shannon's Information index (I=0.3847) were calculated, a dendrogram of the 404 landraces was made, landraces from various zones were distributed throughout the dendrogram, accessions from different agro‐ecological zones were indistinguishable by cluster analysis, geographical separation did not generally result in greater genetic distance, a similar pattern was obtained using principal coordinates (PCO) analysis. As to seven agro‐ecological zones, the maximum Nei’s gene diversity (h = 0.2613)and Shannon index (I = 0.3980) values in zone VII indicated that they were genetically more diverse than those in other zones, while the least genetically diverse region was zone III (h = 0.1772, I = 0.2858). Nei's genetic identity and genetic distance among landraces from seven agro‐ecological zones were also analyzed, the genetic relationship of seven zones was inferred using the UPGMA method. This study demonstrated that SRAP and SSR markers were appropriate for evaluation of sesame genetic diversities. There existed extensive genetic diverse among indigenous landraces and the abundance of genetic diversity of landraces in different agro‐ecological zones was various. Understanding of these characteristics of indigenous landraces in China can provide theoretical foundation for further collection, effective protection and reasonable utilization of these sesame landraces in breeding.

豪雨時 浮遊砂의 最適 SAMPLING 間隔에 關한 硏究(渭川 流域을 中心으로)

趙廷錫,韓良洙,朴相圭 대구대학교 과학기술연구소 1996 科學技術硏究 Vol.3 No.1

This study calculated the optimal sampling interval of suspended sediment on storm in terms of Kalman filter method after collected data the discharge and suspended sediment of Museong place, the downstream of the Wi stream basin that is one of the IHP representative basin the Nakdong river water systems. We'll have to study more specifically about the various elements closely related to the discharge with the reasonable and correct standard of the error variance in the future and we finds out the suspended sediment optimal sampling intervals in other basins it will be applied by the characteristic of them.

객체 관계형 데이타베이스 관리 시스템을 이용한 디지털 앨범의 설계 및 구현

이준서,장염승,한기준 건국대학교 산업기술연구원 2000 건국기술연구논문지 Vol.25 No.-

As the storage capacity of a computer system is rapidly increasing and the cost of computer hardware is decreasing continuously, users can easily manage multimedia data on the personal computer. Especially, various image view programs are widely used to manage image files at the present time. However, since most of these programs do not use a database management system(DBMS), it is very difficult for users to use them efficiently. In this paper, we designed and implemented a Digital Album by using an object-relational database management system, called PARODY(Persistent, Almost, Relational Object Database sYstem) that implements a persistent object database with a relatively simple interface to its C++ class library. Since PARODY is used as a data storage manager of the Digital Album, users can manage(i.e., insert, update, and delete) an image database and search for the required image data from the image database easily. In addition, we use OWL(Object Windows Library) of Borland C++ to implement the user interface of the Digital Album efficiently.

The Influence of Nozzles on Bottomhole Flow Field of Dual-diameter PDC Bit

Yan Yan,Zhichuan Guan,Cai Yang,Han Yan 한국유체기계학회 2020 International journal of fluid machinery and syste Vol.13 No.1

In order to improve cleaning efficiency of dual-diameter PDC bit, the total flow area, inclination angle and azimuth angle of bit’s pilot and reaming nozzles were analyzed. By numerical simulation, the velocity, pressure and particle distribution of bottomhole are obtained. The results show that low pressure area of pilot downhole decreases while low pressure of reamer downhole increases with the increase of total flow area. The mud velocity of central bottomhole has the negative relationship with inclination angle and positive relationship with azimuth angle. Best cleaning efficiency can be achieved when total flow area is 12 ㎠, inclination angles of pilot and reamer are respectively 15° and 25°, and azimuth angles of pilot and reamer are respectively 60° and 30°.

Differences in Epidermal Growth Factor Receptor Gene Mutations and Relationship with Clinicopathological Features in NSCLC Between Uygur and Han Ethnic Groups

Zhang, Yan,Wang, Qiang,Han, Zhi-Gang,Shan, Li Asian Pacific Journal of Cancer Prevention 2013 Asian Pacific journal of cancer prevention Vol.14 No.5

Objective: To investigate differences in mutations of epidermal growth factor receptor (EGFR) gene and relationships with clinicopathological features in patients with non-small cell lung cancer (NSCLC) between Uygur and Han ethnic groups. Methods: The Scorpions amplification refractory mutation system (Scorpions ARMS) was used to measure mutations in exons 18, 19, 20 and 21 of the EGFR gene in paraffin-embedded tumor tissue from NSCLC cases, and statistical analysis was performed to investigate links with clinicopathological features in different histological types of NSCLC. Results: Results from ARMS testing showed EGFR mutations in tumor tissues from six (6) of 50 NSCLC patients of Uygur ethnic group, with a positive rate of 12.0%; four of them (4) had exon 19 deletion in EGFR, and two (2) had L858R point mutation in exon 21 of EGFR. Statistically significant difference was noted in EGFR genetic mutation between adenocarcinoma and non-adenocarcinoma (P < 0.05), but no differences with gender, age group, smoking status, or stage (P > 0.05). EGFR mutations were detected in tumor tissues from 27 of 49 NSCLC patients of Han ethnic group, with a positive rate of 55.1%; 19 of them had exon 19 deletions, seven (7) had L858R point mutations in exon 21 of EGFR and one (1) had mutations in both exon 18 G719X and exon 20 T790M of EGFR. Statistically significant differences were noted in EGFR genetic mutations between genders and between adenocarcinoma and non-adenocarcinoma (P<0.05), but not with age group, smoking status, or stage (P > 0.05). Conclusion: Statistically significant differences were noted in the positive rates of EGFR genetic mutations in NSCLC patients between Uygur and Han ethnic groups, with lower positive rates for the Uygur cases.

Genetic Variants at 6p21.1 and 7p15.3 Identified by GWASs of Multiple Cancers and Ovarian Cancer Risk: a Case-control Study in Han Chinese Women

Li, Da-Ke,Han, Jing,Liu, Ji-Bin,Jin, Guang-Fu,Qu, Jun-Wei,Zhu, Meng,Wang, Yan-Ru,Jiang, Jie,Ma, Hong-Xia Asian Pacific Journal of Cancer Prevention 2014 Asian Pacific journal of cancer prevention Vol.15 No.1

A recent study summarized several published genome-wide association studies (GWASs) of cancer and reported two pleiotropic loci at 6p21.1 and 7p15.3 contributing to multiple cancers including lung cancer, noncardia gastric cancer (NCGC), and esophageal squamous-cell carcinoma (ESCC) in Han Chinese. However, it is not known whether such genetic variants have similar effects on the risk of gynecologic cancers, such as ovarian cancer. Hence, we explored associations between genetic variants in 6p21.1 and 7p15.3 and ovarian cancer risk in Han Chinese women. We performed an independent case-control study by genotyping the two loci (rs2494938 A > G at 6p21.1 and rs2285947 A > G at 7p15.3) in a total of 377 ovarian cancer cases and 1,034 cancer-free controls using TaqMan allelic discrimination assay. We found that rs2285947 at 7p15.3 was significantly associated with risk of ovarian cancer with per allele odds ratio (OR) of 1.33 [95% confidence interval (CI): 1.08-1.64, P=0.008]. However, no significant association was observed between rs2494938 and ovarian cancer risk. Our results showed that rs2285947 at 7p15.3 may also contribute to the development of ovarian cancer in Han Chinese women, further suggesting pleiotropy of 7p15.3 in multiple cancers.

Driving safety analysis of various types of vehicles on long-span bridges in crosswinds considering aerodynamic interference

Yan Han,Jingwen Huang,C.S. Cai,Suren Chen,Xuhui He 한국풍공학회 2019 Wind and Structures, An International Journal (WAS Vol.29 No.4

Strong winds threaten the safety of vehicles on long-span bridges considerably, which could force traffic authorities to reduce speed limits or even close these bridges to traffic. In order to maintain the safe and economic operation of a bridge, a reasonable evaluation of the driving safety on that bridge is needed. This paper aims at carrying outdriving safety analyses for three types of vehicles on a long-span bridge in crosswinds by considering the aerodynamic interference between the bridge and the vehicles based on the wind-vehicle-bridge coupling vibration analysis. Firstly, CFD numerical simulations along with previously obtained wind tunnel testing results were used to determine the aerodynamic force coefficients of the three types of vehicles on the bridge. Secondly, the dynamic responses of the bridge and the vehicles under crosswinds were simulated, and based on those, the driving safety analyses for the three types of vehicles on the bridge were carried out for both cases considering and not considering the aerodynamic interference between the vehicles and the bridge. Finally, the effect of the aerodynamic interference on the safety of the vehicles was investigated. The results show that the aerodynamic interference between the bridge and the vehicles not only affects the accident critical wind speed but also the accident type for all three types of vehicles. Such effects are also different for each of the three types of vehicles being studied.

VM Hotspot Eliminating Method Based on Hot Degree Comprehensive Evaluating

Yan Yong-ming,Guo Jun,Mo Yu-yan,ZhaNG Bin,Han Qing-liang 보안공학연구지원센터(IJGDC) 2014 International Journal of Grid and Distributed Comp Vol.7 No.2

Prognostic Significance of Interactions Between ER Alpha and ER Beta and Lymph Node Status in Breast Cancer Cases

Han, Shu-Jing,Guo, Qing-Qing,Wang, Ting,Wang, You-Xin,Zhang, Yu-Xiang,Liu, Fen,Luo, Yan-Xia,Zhang, Jie,Wang, You-Li,Yan, Yu-Xiang,Peng, Xiao-Xia,Ling, Rui,He, Yan Asian Pacific Journal of Cancer Prevention 2013 Asian Pacific journal of cancer prevention Vol.14 No.10

Objective: Both estrogen receptors, ER alpha ($ER{\alpha}$) and ER beta ($ER{\beta}$), are expressed in 50-70% of breast cancer cases. The role of $ER{\alpha}$ as a prognostic marker in breast cancer has been well established as its expression is negative correlated with tumor size and lymph node metastasis. $ER{\beta}$ is also a favorable prognostic predictor although this is less well documented than for $ER{\alpha}$. Materials and Methods: To explore whether ERs independently or together might influence clinical outcome in breast cancer, the correlation between the ERs with the clinicopathological features was analyzed in 84 patients. Results: $ER{\alpha}$ expression negatively correlated with tumor stage (r=-0.246, p=0.028) and tended to be negatively correlated with lymph node status (r=-0.156, p=0.168) and tumor size (r=-0.246, p=0.099). Also, $ER{\beta}$ was negatively correlated with nodal status (r=-0.243, p=0.028), as was coexpression of $ER{\alpha}$ and $ER{\beta}$ (p=0.043, OR=0.194, 95% CI= 0.040-0.953). Conclusion: Coexpression of ERs might serve as an indicator of good prognosis in breast cancer patients.

Sunlight Compensation for Vision Based Drone Detection

Yan Han Lau,Niven Sie Jun Liang,Shao Xuan Seah,Sutthiphong Srigrarom 제어로봇시스템학회 2021 제어로봇시스템학회 국제학술대회 논문집 Vol.2021 No.10

Computer vision based object detection can be applied in security and monitoring scenarios, such as detecting and tracking drone intrusions using cameras. However, its effectiveness is dependent on environmental conditions. For example, under bright sunlight and clear sky conditions, the sunlight reflecting off a target could cause it to blend into the sky and prevent detection. In this paper, an algorithm to compensation for the effects of sunlight on object detection was proposed. The algorithm applied a localised contrast increase to the sky through RGB-HSV conversion and image extraction techniques, which avoided the generation of false positives among the treeline. Preliminary tests with prerecorded videos showed that the algorithm improves detection under bright sunlight conditions but the contrast gain had to be manually tuned. Methods to dynamically tune the gain, and field tests to determine the algorithm’s real time effectiveness, are slated for future work.