A Parallel Algorithm of Multiple String Matching Based on Set-Partition in Multi-core Architecture

Jiahui Liu,Fangzhou Li,Guanglu Sun 보안공학연구지원센터 2016 International Journal of Security and Its Applicat Vol.10 No.4

With the coming of the big data era, the data processing in large scale comes out with a new challenge. However, string matching still plays an important role in the network security and information retrieval fields, because of the large size of pattern set with the overhead of memory and access memory time. Improving the string matching algorithm to adapt to the large scale tasks is desirable and meaningful. In this paper, we present and implement a parallel algorithm of multiple string matching based on multi-core platform. In addition, this work focuses on the partition of pattern set by using genetic algorithm through the internal relation of the patterns to reduce the memory overhead and execution performance. Compared with the classical ones, our experiments on both high and low hit-rate data demonstrate that the performance of algorithm enhances about on average by 20%-40% in general. Besides, the proposed algorithm reduces the memory cost on average by 4%-20%.

Multifunctional nanozyme‑reinforced copper‑coordination polymer nanoparticles for drug‑resistance bacteria extinction and diabetic wound healing

Jiahui Zhao,Tengfei Xu,Jichao Sun,Haitao Yuan,Mengyun Hou,Zhijie Li,Jigang Wang,Zhen Liang 한국생체재료학회 2023 생체재료학회지 Vol.27 No.00

Background Drug-resistant bacterial infections in chronic wounds are a persistent issue, as they are resistant to antibiotics and can cause excessive inflammation due to generation of reactive oxygen species (ROS). An effective solution would be to not only combat bacterial infections but also scavenge ROS to relieve inflammation at the wound site. Scaffolds with antioxidant properties are attractive for their ability to scavenge ROS, and there is medical demand in developing antioxidant enzyme-mimicking nanomaterials for wound healing. Methods In this study, we fabricated copper-coordination polymer nanoparticles (Cu-CPNs) through a self-assembly process. Furthermore, ε-polylysine (EPL), an antibacterial and cationic polymer, was integrated into the Cu-CPNs structure through a simple one-pot self-assembly process without sacrificing the glutathione peroxidase (GPx) and superoxide dismutase (SOD)-mimicking activity of Cu-CPNs. Results The resulting Cu-CPNs exhibit excellent antioxidant propertiesin mimicking the activity of glutathione peroxidase and superoxide dismutase and allowing them to effectively scavenge harmful ROS produced in wound sites. The in vitro experiments showed that the resulting Cu-CPNs@EPL complex have superior antioxidant properties and antibacterial effects. Bacterial metabolic analysis revealed that the complex mainly affects the cell membrane integrity and nucleic acid synthesis that leads to bacterial death. Conclusions The Cu-CPNs@EPL complex has impressive antioxidant properties and antibacterial effects, making it a promising solution for treating drug-resistant bacterial infections in chronic wounds. The complex’s ability to neutralize multiple ROS and reduce ROS-induced inflammation can help relieve inflammation at the wound site.

Untargeted metabolite profiling of serum in rats exposed to pyrraline

Chuanqin Hu,Jiahui Wang,Fangyuan Qi,Yingli Liu,Fen Zhao,Jing Wang,Baoguo Sun 한국식품과학회 2023 Food Science and Biotechnology Vol.32 No.11

Pyrraline, one of advanced glycation end-products, is formed in advanced Maillard reactions. It was reported that the presence of pyrraline was tested to be associated with nephropathy and diabetes. Pyrraline might result in potential health risks because many modern diets are heat processed. In the study, an integrated metabolomics by ultra-high-performance liquid chromatography with mass spectrometry was used to evaluate the effects of pyrraline on metabolism in rats. Thirty-two metabolites were identified as differential metabolites. Linolenic acid metabolism, phenylalanine, tyrosine and tryptophan biosynthesis, arachidonic acid metabolism, tyrosine metabolism and glycerophospholipid metabolism were the main perturbed networks in this pathological process. Differential metabolites and metabolic pathways we found give new insights into studying the toxic molecular mechanisms of pyrraline.

Research Progress of the Structure Vibration-Attitude Coordinated Control of Spacecraft

Jingyu Yang,Shiying Qu,Jiahui Lin,Zhiqi Liu,Xuanming Cui,Chu Wang,Dujiang Zhang,Mingcheng gu,Zhongrui Sun,Kang Yang,Lanwei Zhou,Guoping Chen 한국항공우주학회 2015 International Journal of Aeronautical and Space Sc Vol.16 No.4

This paper gives an overview of research on the field of structure vibration-attitude coordinated control of spacecraft. First of all, the importance of the technology has been given an introduction, and then later the research progress of space structure dynamics modeling, research progress of structure vibration-attitude coordinated control of flexible spacecraft have been discussed respectively. Finally, future research on application of structure vibration-attitude coordinated control of spacecraft has been recommended.

Protective Effect of Schisandra chinensis Polysaccharides Against the Immunological Liver Injury in Mice Based on Nrf2/ARE and TLR4/NF-κB Signaling Pathway

Yingying Shan,Bin Jiang,Jiahui Yu,Jiaye Wang,Xiaoli Wang,He Li,Chunmei Wang,JianGuang Chen,Jinghui Sun 한국식품영양과학회 2019 Journal of medicinal food Vol.22 No.9

We have previously demonstrated the hepatoprotective effect of Schisandra chinensis polysaccharides (SCP) against the liver injury induced by alcohol, high-fat diet, and carbon tetrachloride in mice. In this study, we investigated the effect of SCP against the immunological liver injury induced by concanavalin A (Con A) in mice. The results showed that SCP could significantly reduce the level of alanine aminotransferase (ALT), aspartate aminotransferase (AST), tumor necrosis factor-α (TNF-α), interferon-γ (IFN-γ), interleukin-1β (IL-1β), and interleukin-6 (IL-6) in the serum of mice with immunological liver injury. SCP could significantly decrease the content of malondialdehyde (MDA) and nitric oxide (NO) and increase the activity of superoxide dismutase (SOD) and glutathione (GSH) in the liver tissue. SCP could significantly increase the number of CD4+ and decrease the number of CD8+ in the peripheral blood, and elevate the ratio of CD4+/CD8+. SCP could significantly downregulate the expression of Kelch-like ECH-associated protein 1 (Keap1) and upregulate the expression of nuclear factor-erythroid 2-related factor2 (Nrf2) and downstream gene heme oxygenase-1 (HO-1), and downregulate the expression of toll-like receptor 4 (TLR4), myeloid differentiation primary response gene 88 (MyD88), and nuclear factor-kappa B (NF-κB) proteins. This study indicates that SCP can reduce the release of a large number of inflammatory factors to inhibit the oxidative stress in mice with the immunological liver injury induced by Con A, and its mechanism is closely related to the regulation of Nrf2/antioxidant response element and TLR4/NF-κB signaling pathways.

Research Progress of the Structure Vibration-Attitude Coordinated Control of Spacecraft

Yang, Jingyu,Qu, Shiying,Lin, Jiahui,Liu, Zhiqi,Cui, Xuanming,Wang, Chu,Zhang, Dujiang,gu, Mingcheng,Sun, Zhongrui,Yang, Kang,Zhou, Lanwei,Chen, Guoping The Korean Society for Aeronautical and Space Scie 2015 International Journal of Aeronautical and Space Sc Vol.16 No.4

This paper gives an overview of research on the field of structure vibration-attitude coordinated control of spacecraft. First of all, the importance of the technology has been given an introduction, and then later the research progress of space structure dynamics modeling, research progress of structure vibration-attitude coordinated control of flexible spacecraft have been discussed respectively. Finally, future research on application of structure vibration-attitude coordinated control of spacecraft has been recommended.

Modeling the Diffusion-Driven Growth of a Pre-Existing Gas Bubble

Anil Kunwar,Haitao Ma,Junhao Sun,Shuang Li,Jiahui Liu 대한금속·재료학회 2015 METALS AND MATERIALS International Vol.21 No.5

Finite element method is utilized to solve the diffusion equation and model the diffusion driven growth of a pre-existing spherical gas bubble in molten tin at the solder/substrate interface for reflow time of 120 s and temperature of 250 °C. The gibbs free energy change required for determining the equilibrium concentration at liquid solder/gas bubble boundary was calculated using the thermodynamic polynomial coefficients. The rate of change of radius, as function of concentration flux, is calculated using the lagrangian mesh update methodology. With an initial diameter of 20 μm, the bubble growth is calculated as a function of contact angle. When the wetting angle is varied from a value of 30° to 135°, the numerical calculation has yielded the final sizes for the bubble to change from 62.87 μm to 82.8 μm respectively. The effect of wetting transition in the growth of bubble was studied by the in-situ observation of bubble dynamics through synchrotron radiation imaging technique. The scanning electron microscopy images of the morphologies of intermetallic compounds influenced by growing bubble in Sn/Cu solder joint and bubble pictures obtained through synchrotron radiation are utilized to get the experimental size of the bubble. The mean experimental bubble diameter has been obtained as 76.39 μm. The growing bubble inhibits the growth of intermetallic compound at its vicinity and thereby reduces the strength of solder joints.

Transcriptomic and proteomic profiling revealed global changes in Streptococcus thermophilus during pH-controlled batch fermentations

Yali Qiao,Cong Leng,Gefei Liu,Yanjiao Zhang,Xuepeng Lv,Hongyu Chen,Jiahui Sun,Zhen Feng 한국미생물학회 2019 The journal of microbiology Vol.57 No.9

Understanding global changes of physiological processes at the molecular level during the growth of Streptococcus thermophilus is essential for the rational design of cultivation media and the optimization of bioprocesses. Transcriptomics and proteomics were combined to investigate the global changes at the transcript and protein level during the growth of S. thermophilus. The expression of 1396 genes (FDR ≤ 0.001) and 876 proteins (P < 0.05) changed significantly over time. The most remarkable growth phase dependent changes occurred in the late-lag phase and were related to heterofermentation, glycolysis, peptidoglycan biosynthesis, conversion between amino acids and stress response. The present results could provide theoretical guidance for high-cell-density culture, help design cultivation media, and help attain a high biomass of S. thermophilus.