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Enzymes involved in fruiting body senescence in L. edodes.
Yuichi Sakamoto,Keiko Nakade,Naotake Konno 한국버섯학회 2010 한국버섯학회지 Vol.8 No.4
Lentinula edodes (shiitake mushroom) is a very popular edible, cultivated mushroom in Japan. There are post-storage problems with shiitake mushrooms, such as gill browning and cell wall lysis of the fruiting body, which can result in loss of fresh food quality and consequent loss of value. Lentinan is a cell wall component of beta-1, 3-linked-D-glucan with beta-1, 6 branches, which was isolated as an anti-tumor active-substance from L. edodes. Lentinan content decreases following harvest as a result of increased glucanase activity. We isolated one exo-glucanase encoding genes, exg21) and two endo-glucanase encoding gene tlg12) and glu1 from L. edodes. Transcription level of the exg2, tlg1 and glu1 gene increased after harvesting. Enzymes encoded by the genes have lentinan degrading activity, therefore, these genes are involved in lentinan degradation after harvesting. We also identified several cell wall degradation- related enzyme-encoding genes3), such as mixed-linked glucanase (mlg1), chitinases (chi1, chi29), chitin deacetylase (chd1), and chitosanase (cho1). It is revealed that transcriptional levels of these genes increased after harvesting, by real-time PCR. Glucanase and chitinase activity increased following harvest as results of increased transcription of these cell wall degradation-related enzyme-encoding genes. Increase of these cell wall degradation- related enzyme activities would cause cell wall lysis and lentinan degradation during post-harvest preservation. We identified laccase and tyrosinase encoding genes (lcc4 and tyr, respectively) by PCR-subtraction. The lcc4 was a novel laccase-encoding gene in L. edodes. Transcription levels of lcc4 and tyr increased after harvesting, and these genes would be involved in browning of the fruiting body. 1) Sakamoto et al. (2005) Current Genetics, 48: 195-203 2) Sakamoto et al. (2006) Plant Physiology 141: 793-801 3) Sakamoto et al. (2009) Current Genetics 55: 409-423
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Yuki Tanaka,Hideo Dohra,Tomohiro Suzuki,Takeshi Kurokura,Masayuki Iigo,Fubito Toyama,Naoto Habu,Naotake Konno 한국유전학회 2017 Genes & Genomics Vol.39 No.12
The complete mitochondrial genome sequence of the wood-decaying fungus Fomitopsis palustris (Basidiomycete, Agaricomycotina) was determined by next-generation sequencing technology. The complete sequence of the circular mitochondrial DNA of F. palustris was 63,479 bp in length with a 75.98% AT content. The mitochondrial genome encoded 14 conserved proteins, 2 ribosomal RNAs, 26 transfer RNAs, and 19 additional open reading frames. The coxI and cob genes contained six and one group I introns, respectively, and encoded eight open reading frames, including seven intron-encoded endonucleases. The complete mitochondrial genome of F. palustris presented herein represents the first such report for brown rot basidiomycetes. In addition, the BLAST score ratio and phylogenetic analysis may open new avenues to understanding the evolutionary status of this fungus.
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