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Consequences of land use change on bird distribution at Sakaerat Environmental Research Station
Yongyut Trisurat,Prateep Duengkae 한국생태학회 2011 Journal of Ecology and Environment Vol.34 No.2
The objectives of this research were to predict land-use/land-cover change at the Sakaerat Environmental Research Station (SERS) and to analyze its consequences on the distribution for Black-crested Bulbul (Pycnonotus melanicterus),which is a popular species for bird-watching activity. The Dyna-CLUE model was used to determine land-use allocation between 2008 and 2020 under two scenarios. Trend scenario was a continuation of recent land-use change (2002-2008),while the integrated land-use management scenario aimed to protect 45% of study area under intact forest, rehabilitated forest and reforestation for renewable energy. The maximum entropy model (Maxent), Geographic Information System (GIS) and FRAGSTATS package were used to predict bird occurrence and assess landscape fragmentation indices,respectively. The results revealed that parts of secondary growth, agriculture areas and dry dipterocarp forest close to road networks would be converted to other land use classes, especially eucalyptus plantation. Distance to dry evergreen forest, distance to secondary growth and distance to road were important factors for Black-crested Bulbul distribution because this species prefers to inhabit ecotones between dense forest and open woodland. The predicted for occurrence of Black-crested Bulbul in 2008 covers an area of 3,802 ha and relatively reduces to 3,342 ha in 2020 for trend scenario and to 3,627 ha for integrated-land use management scenario. However, intact habitats would be severely fragmented,which can be noticed by total habitat area, largest patch index and total core area indices, especially under the trend scenario. These consequences are likely to diminish the recreation and education values of the SERS to the public.
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Consequences of land use change on bird distribution at Sakaerat Environmental Research Station
Trisurat, Yongyut,Duengkae, Prateep The Ecological Society of Korea 2011 Journal of Ecology and Environment Vol.34 No.2
The objectives of this research were to predict land-use/land-cover change at the Sakaerat Environmental Research Station (SERS) and to analyze its consequences on the distribution for Black-crested Bulbul (Pycnonotus melanicterus), which is a popular species for bird-watching activity. The Dyna-CLUE model was used to determine land-use allocation between 2008 and 2020 under two scenarios. Trend scenario was a continuation of recent land-use change (2002-2008), while the integrated land-use management scenario aimed to protect 45% of study area under intact forest, rehabilitated forest and reforestation for renewable energy. The maximum entropy model (Maxent), Geographic Information System (GIS) and FRAGSTATS package were used to predict bird occurrence and assess landscape fragmentation indices, respectively. The results revealed that parts of secondary growth, agriculture areas and dry dipterocarp forest close to road networks would be converted to other land use classes, especially eucalyptus plantation. Distance to dry evergreen forest, distance to secondary growth and distance to road were important factors for Black-crested Bulbul distribution because this species prefers to inhabit ecotones between dense forest and open woodland. The predicted for occurrence of Black-crested Bulbul in 2008 covers an area of 3,802 ha and relatively reduces to 3,342 ha in 2020 for trend scenario and to 3,627 ha for integrated-land use management scenario. However, intact habitats would be severely fragmented, which can be noticed by total habitat area, largest patch index and total core area indices, especially under the trend scenario. These consequences are likely to diminish the recreation and education values of the SERS to the public.
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Jaito Wattanawan,Panthum Thitipong,Ahmad Syed Farhan,Singchat Worapong,Muangmai Narongrit,Han Kyudong,Koga Akihiko,Duengkae Prateep,Srikulnath Kornsorn 한국유전학회 2024 Genes & Genomics Vol.46 No.1
The location of female-specific/linked loci identified in Siamese cobra (Naja kaouthia) previously has been determined through in silico chromosome mapping of the Indian cobra genome (N. naja) as a reference genome. In the present study, we used in silico chromosome mapping to identify sex-specific and linked loci in Siamese cobra. Many sex-specific and sex-linked loci were successfully mapped on the Z sex chromosome, with 227 of the 475 specific loci frequently mapped in a region covering 57 Mb and positioned at 38,992,675–95,561,177 bp of the Indian cobra genome (N. naja). This suggested the existence of a putative sex-determining region (SDR), with one specific locus (PA100000600) homologous to the TOPBP1 gene. The involvement of TOPBP1 gene may lead to abnormal synaptonemal complexes and meiotic chromosomal defects, resulting in male infertility. These findings offer valuable insights into the genetic basis and functional aspects of sex-specific traits in the Siamese cobra, which will contribute to our understanding of snake genetics and evolutionary biology.
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Panthum Thitipong,Ariyaphong Nattakan,Wattanadilokchatkun Pish,Singchat Worapong,Ahmad Syed Farhan,Kraichak Ekaphan,Dokkaew Sahabhop,Muangmai Narongrit,Han Kyudong,Duengkae Prateep,Srikulnath Kornsorn 한국유전학회 2023 Genes & Genomics Vol.45 No.2
Background The number of nucleotide sequences in public repositories has exploded recently. However, the data contain errors, leading to incorrect species identification. Several fighting fish (Betta spp.) are poorly described, with unresolved cryptic species complexes masking undescribed species. Here, DNA barcoding was used to detect erroneous sequences in public repositories. Objective This study reflects the current quantitative and qualitative status of DNA barcoding in fighting fish and provides a rapid and reliable identification tool. Methods A total of 1034 barcode sequences were analyzed from mitochondrial cytochrome c oxidase I (COI) and cytochrome b (Cytb) genes from 71 fighting fish species. Results The nearest neighbor test showed the highest percentage of intraspecific nearest neighbors at 93.41% for COI and 91.67% for Cytb, which can be used as reference barcodes for certain taxa. Intraspecific variation was usually less than 13%, while most species differed by more than 54%. The barcoding gap, calculated from the difference between inter- and intraspecific sequence divergences, was negative in the COI data set indicating overlapping intra- and interspecific sequence divergence. Sequence saturation was observed in the Cytb data set but not in the COI data set. Conclusion The COI gene should thus be used as the main barcoding marker for fighting fish.
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