Cloning and Expression of amyE Gene from Bacillus subtilis in Zymomonas mobilis and Direct Production of Ethanol from Soluble Starch

Guang-Jun Wang,Zhong-Shan Wang,Yong-Wei Zhang,Yizheng Zhang 한국생물공학회 2012 Biotechnology and Bioprocess Engineering Vol.17 No.4

Two proven secretion signal zmo130 and zmo331 native to Zymomonas mobilis were fused to the N terminal of α-amylase from Bacillus subtilis and transformed into 5 different strains of Z. mobilis separately. It was found that the signal zmo130 could direct the extracellular secretion of the expressed α-amylase with high activity, but zmo331 could not. Fermentation experiments demonstrated that the recombinant Z. mobilis CICC 10225(p130A) exhibited the highest level of ethanol production, which is nearly 50% of the theoretical yield of ethanol from soluble starch,but another recombinant Z. mobilis ATCC 31821(p130A)took the shortest fermentation time of approximately 3days, with the second high level of ethanol yield. The recombined strains in our study could be an important target for the following genetic engineering of next amylase in order to hydrolyze starch completely.

Identification of Biomarkers for Diagnosis of Gastric Cancer by Bioinformatics

Wang, Da-Guang,Chen, Guang,Wen, Xiao-Yu,Wang, Dan,Cheng, Zhi-Hua,Sun, Si-Qiao Asian Pacific Journal of Cancer Prevention 2015 Asian Pacific journal of cancer prevention Vol.16 No.4

Background: We aimed to discover potential gene biomarkers for gastric cancer (GC) diagnosis. Materials and Methods: Genechips of 10 GC tissues and 10 gastric mucosa (GM, para-carcinoma tissue, normal control) tissues were generated using an exon array of Affymetrix containing 30,000 genes. The differentially expressed genes (DEGs) between GC tissues and normal control were identified by the Limma package and analyzed by hierarchical clustering analysis. Gene ontology (GO) and pathway enrichment analyses were performed for investigating the functions of DEGs. Receiver operating characteristics (ROC) analysis was performed to measure the effects of biomarker candidates for diagnosis of GC. Results: Totals of 896 up-regulated and 60 down-regulated DEGs were identified to be differentially expressed between GC samples and normal control. Hierarchical clustering analysis showed that DEGs were highly differentially expressed and most DEGs were up-regulated. The most significantly enriched GO-BP term was revealed to be mitotic cell cycle and the most significantly enriched pathway was cell cycle. The intersection analysis showed that most significant DEGs were cyclin B1 (CCNB1) and cyclin B2 (CCNB2). The sensitivities and specificities of CCNB1 and CCNB2 were both high (p<0.0001). Areas under the ROC curve for CCNB1 and CCNB2 were both greater than 0.9 (p<0.0001). Conclusions: CCNB1 and CCNB2, which were involved in cell cycle, played significant roles in the progression and development of GC and these genes may be potential biomarkers for diagnosis and prognosis of GC.

ELECTROCHEMICAL Co 3 O 4 NANOPOROUS THIN FILMS SENSOR FOR HYDROGEN PEROXIDE DETECTION

GUANG SHENG CAO,RUILIN WANG,PEILONG WANG,XIN LI,YUE WANG,JUNPING LI,GUILONG WANG 성균관대학교(자연과학캠퍼스) 성균나노과학기술원 2014 NANO Vol.9 No.4

The nanoporous Co 3 O 4 thin ¯lms were prepared on indium tin oxide (ITO) glasses by anelectrodeposition method. The surface morphology and composition of the nanoporous Co 3 O 4¯lms were characterized by scanning electron microscopy (SEM), energy-dispersive X-rayanalysis (EDS) and X-ray photoelectron spectroscopy (XPS). The results show that the as-deposited nanoporous Co 3 O 4 ¯lm is constructed by many interconnected nano°akes withthickness of about 40 nm. The cyclic voltammetry (CV) measurement indicates that thenanoporous Co 3 O 4 ¯lms exhibit remarkable electrocatalytic activities for the hydrogen peroxide(H 2 O 2 ) reduction which shows that it is a good candidate to be employed as electrode materialsfor electrochemical sensing of H 2 O 2 . Further analysis indicated that the detection sensitivityof the sensor was 1.357 mA mM? 1 cm? 2 and the detection limit was estimated to be about0.2 mM.

Dissecting Causal Relationships Between Gut Microbiota, Blood Metabolites, and Stroke: A Mendelian Randomization Study

Wang Qi,Dai Huajie,Hou Tianzhichao,Hou Yanan,Wang Tiange,Lin Hong,Zhao Zhiyun,Li Mian,Zheng Ruizhi,Wang Shuangyuan,Lu Jieli,Xu Yu,Liu Ruixin,Ning Guang,Wang Weiqing,Bi Yufang,Zheng Jie,Xu Min 대한뇌졸중학회 2023 Journal of stroke Vol.25 No.3

Background and Purpose We investigated the causal relationships between the gut microbiota (GM), stroke, and potential metabolite mediators using Mendelian randomization (MR). Methods We leveraged the summary statistics of GM (n=18,340 in the MiBioGen consortium), blood metabolites (n=115,078 in the UK Biobank), and stroke (cases n=60,176 and controls n=1,310,725 in the Global Biobank Meta-Analysis Initiative) from the largest genome-wide association studies to date. We performed bidirectional MR analyses to explore the causal relationships between the GM and stroke, and two mediation analyses, two-step MR and multivariable MR, to discover potential mediating metabolites. Results Ten taxa were causally associated with stroke, and stroke led to changes in 27 taxa. In the two-step MR, <i>Bifidobacteriales</i> order, <i>Bifidobacteriaceae</i> family, <i>Desulfovibrio</i> genus, apolipoprotein A1 (ApoA1), phospholipids in high-density lipoprotein (HDL_PL), and the ratio of apolipoprotein B to ApoA1 (ApoB/ApoA1) were causally associated with stroke (all <i>P</i><0.044). The causal associations between <i>Bifidobacteriales</i> order, <i>Bifidobacteriaceae</i> family and stroke were validated using the weighted median method in an independent cohort. The three GM taxa were all positively associated with ApoA1 and HDL_PL, whereas <i>Desulfovibrio</i> genus was negatively associated with ApoB/ApoA1 (all <i>P</i><0.010). Additionally, the causal associations between the three GM taxa and ApoA1 remained significant after correcting for the false discovery rate (all q-values <0.027). Multivariable MR showed that the associations between <i>Bifidobacteriales</i> order, <i>Bifidobacteriaceae</i> family and stroke were mediated by ApoA1 and HDL_PL, each accounting for 6.5% (<i>P</i>=0.028) and 4.6% (<i>P</i>=0.033); the association between <i>Desulfovibrio</i> genus and stroke was mediated by ApoA1, HDL_PL, and ApoB/ApoA1, with mediated proportions of 7.6% (<i>P</i>=0.019), 4.2% (<i>P</i>=0.035), and 9.1% (<i>P</i>=0.013), respectively. Conclusion The current MR study provides evidence supporting the causal relationships between several specific GM taxa and stroke and potential mediating metabolites.

Meridian Studies in China: A Systematic Review

Guang-Jun Wang,M. Hossein Ayati,Guang-Jun Wang 사단법인약침학회 2010 Journal of Acupuncture & Meridian Studies Vol.3 No.1

Meridian theory is a major part of Chinese medicine and has guided acupuncture and clinical practice for thousands of years. Meridian theory describes many important concepts about the rules of human body function and regulation, but has comparatively huge differences with the basic concepts of modern medicine. These differences have caused deep concern and attracted attention from scholars, both inside and outside of China. The interest in meridian theory lies in determining the structural nature of meridians. Not only is this information still unclear, it is very difficult to achieve clear results in a short period of time. Despite this, the phenomena of meridians can be used as the entry point for meridian studies. After many years of effort, although the physical structure of meridians has not been found, the existence of the meridian phenomena has been fully confirmed. Although there is a lack of morphological evidence for the existence of the meridian,concluding non-existence may be incorrect as morphology techniques develop and structures previously not determined are being found. Since the phenomenon of meridians exists, some biological basis behind its occurrence must be present. This implies that research on meridians needs to continue as research techniques advance and may eventually reveal the biological basis of the meridian phenomenon. In the present review, we analyze the history of meridian studies in China.

Linear Pole-placement Anti-windup Control for Input Saturation Nonlinear System Based on Takagi Sugeno Fuzzy Model

Fa Guang Wang,Hongmei Wang,박승규,Xue-Song Wang 제어·로봇·시스템학회 2016 International Journal of Control, Automation, and Vol.14 No.6

An anti-windup controller for multi-input nonlinear system is proposed in this paper. The proposedmethod does not need to calculate every time for every fuzzy rules comparing with traditional linear pole placementof T-S(Takagi-Sugeno) fuzzy. This means fewer LMIs(linear matrix inequality) will be needed and its solutionwill be guaranteed as much as possible. For different saturation limit, different D-stable disk center and radius ofpole placement can be selected to eliminate input saturation effect directly. Nonlinear system will be transferredto T-S fuzzy model first. Then, by employing a series of transition matrix, nonlinear system will be transferredinto a nearly linear format accompanied by a nonlinear part. Finally, by designing a proper controller, linear poleplacement method can be used and the controller gains can be calculated out with LMIs.

Pathogenicity of Five Strains of Toxoplasma gondii from Different Animals to Chickens

Shuai Wang,Guang-Wei Zhao,Wang Wang,Zhen-Chao Zhang,Bo Shen,I. A. Hassan,Qing Xie,Ruo-Feng Yan,Xiao-Kai Song,Li-Xin Xu,Xiang-Rui Li 대한기생충학열대의학회 2015 The Korean Journal of Parasitology Vol.53 No.2

Partial oxidation reforming of biomass fuel gas over nickel-based monolithic catalyst with naphthalene as model compound

Tie Jun Wang,Chen Guang Wang,Tie Jun Wang,Yan Gao,Chuang Zhi Wu,Long Long Ma 한국화학공학회 2008 Korean Journal of Chemical Engineering Vol.25 No.4

With naphthalene as biomass tar model compound, partial oxidation reforming (with addition of O2) and dry reforming of biomass fuel gas were investigated over nickel-based monoliths at the same conditions. The results showed that both processes had excellent performance in upgrading biomass raw fuel gas. Above 99% of naphthalene was converted into synthesis gases (H2+CO). About 2.8 wt% of coke deposition was detected on the catalyst surface for dry reforming process at 750 oC during 108 h lifetime test. However, no coke deposition was detected for partial oxidation reforming process, which indicated that addition of O2 can effectively prohibit the coke formation. O2 can also increase the CH4 conversion and H2/CO ratio of the producer gas. The average conversion of CH4 in dry and partial oxidation reforming process was 92% and 95%, respectively. The average H2/CO ratio increased from 0.95 to 1.1 with the addition of O2, which was suitable to be used as synthesis gas for dimethyl ether (DME) synthesis.

CONTROL STRATEGY FOR SHIFT SCHEDULE CORRECTION BASED ON DRIVING HABITS FOR VEHICLES WITH AUTOMATIC TRANSMISSION

Guang Xia,Jun Gao,Xiwen Tang,Shaojie Wang,Baoqun Sun 한국자동차공학회 2020 International journal of automotive technology Vol.21 No.2

A shift schedule modification program is an intelligent system for automatic transmission. This program can adjust shift points to cater to drivers with different driving habits. An important prerequisite in designing a personalized shift schedule is identifying the driving habits of drivers. In this study, we developed an identification algorithm based on wavelet neural network and Bayesian fusion decision-making. First, a system for identifying driving styles was established based on the wavelet neural network. Second, the results were integrated by Bayesian fusion decision-making to obtain the driving habits. Finally, different correction coefficients were selected based on driving habits to satisfy the requirements of drivers. Experimental results show that the driving habits can be accurately identified based on wavelet neural network and Bayesian fusion decision-making, and the correction control strategy can rectify the shift schedule effectively. The correction control strategy satisfies the requirements of different drivers for vehicle performance and enhances the intelligence of automatic transmission.

A Combined Pharmacophore-Based Virtual Screening, Docking Study and Molecular Dynamics (MD) Simulation Approach to Identify Inhibitors with Novel Scaffolds for Myeloid cell leukemia (Mcl-1)

Guang-kai Bao,Lu Zhou,Tai-jin Wang,Lu-fen He,Tao Liu 대한화학회 2014 Bulletin of the Korean Chemical Society Vol.35 No.7

Chemical feature based quantitative pharmacophore models were generated using the HypoGen module implemented in DS2.5. The best hypothesis, Hypo1, which was characterized by the highest correlation coefficient (0.96), the highest cost difference (61.60) and the lowest RMSD (0.74), consisted of one hydrogen bond acceptor, one hydrogen bond donor, one hydrophobic and one ring aromatic. The reliability of Hypo1 was validated on the basis of cost analysis, test set, Fischer’s randomization method and GH test method. The validated Hypo1 was used as a 3D search query to identify novel inhibitors. The screened molecules were further refined by employing ADMET, docking studies and visual inspection. Three compounds with novel scaffolds were selected as the most promising candidates for the designing of Mcl-1 antagonists. Finally, a 10 ns molecular dynamics simulation was carried out on the complex of receptor and the retrieved ligand to demonstrate that the binding mode was stable during the MD simulation.