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A 32nm EGPU Parallel Multiprocessor Based on Co-issue and Multi-Dimensional Parallelism Architecture
Yang Wang,Li Zhou,Tao Sun,Yanhu Chen,Jia Wang,Yuanzhi Zhang,Yuanyuan Gao 보안공학연구지원센터 2015 International Journal of Multimedia and Ubiquitous Vol.10 No.5
In this paper, a Parallel Multiprocessor (PM) based on SIMT (Single Instruction and Multiple Threads) architecture is proposed. With co-issue architecture and multi-dimensional parallelism implemented in high-effective PM, Embedded Graphics Processing Unit (EGPU) provides great performance for various situations, such as general purpose computing, 3D scene rendering, and graphics processing. Application programs are departed into separated threads. Allocated by Thread Processing Unit (TPU), separated threads can be executed in parallel. Parallelism in different hierarchy and dimension are implemented by Multi-Dimensional Parallelism Processor (MD-PP), which has made a proper trade-off between performance and cost. Additionally, PM improves the hardware occupancy with its co-issue architecture and internal bus accessing mechanism to meet the demand of processing capability. Its unified shading architecture also helps to hide processing latency. PM can execute 4 basic operations in the best case and 2 in the worst case within each clock cycle. With 32nm process technology and 200MHz clock frequency, PM’s area is about 5104494um2, power consumption is about 101.838mW, and it can process nearly 28M vertices or fragments in average. Experimental results show that the MD-PP based PM can process data with high performance and get a balance between efficiency and hardware consumption simultaneously.
Improving performance of medical image alignment through super-resolution
Liwei Deng,Yuanzhi Zhang,Jing Wang,Sijuan Huang,Xin Yang 대한의용생체공학회 2023 Biomedical Engineering Letters (BMEL) Vol.13 No.3
Medical image alignment is an important tool for tracking patient conditions, but the quality of alignment is influenced bythe effectiveness of low-dose Cone-beam CT (CBCT) imaging and patient characteristics. To address these two issues, wepropose an unsupervised alignment method that incorporates a preprocessing super-resolution process. We constructed themodel based on a private clinical dataset and validated the enhancement of the super-resolution on alignment using clinicaland public data. Through all three experiments, we demonstrate that higher resolution data yields better results in the alignmentprocess. To fully constrain similarity and structure, a new loss function is proposed; Pearson correlation coefficientcombined with regional mutual information. In all test samples, the newly proposed loss function obtains higher resultsthan the common loss function and improve alignment accuracy. Subsequent experiments verified that, combined with thenewly proposed loss function, the super-resolution processed data boosts alignment, can reaching up to 9.58%. Moreover,this boost is not limited to a single model, but is effective in different alignment models. These experiments demonstratethat the unsupervised alignment method with super-resolution preprocessing proposed in this study effectively improvedalignment and plays an important role in tracking different patient conditions over time.
Xiaoping Yin,Shanshan Zhao,Bin Yan,Yanhe Tian,Teer Ba,Jiangguo Zhang,Yuanzhi Wang 대한기생충학ㆍ열대의학회 2019 The Korean Journal of Parasitology Vol.57 No.5
The Alataw Pass, near the Ebinur Lake Wetland (northwest of China) and Taldykorgan (east of Kazakhstan), is a natural habitat for wild rodents. To date, little has been done on the surveillance of Bartonella spp. and Wolbachia spp. from fleas in the region. Here we molecularly detected Bartonella spp. and Wolbachia spp. in wild rodent fleas during January and October of 2016 along the Alataw Pass-Kazakhstan border. A total of 1,706 fleas belonging to 10 species were collected from 6 rodent species. Among the 10 flea species, 4 were found to be positive for Wolbachia, and 5 flea species were positive for Bartonella. Molecular analysis indicated that i) B. rochalimae was firstly identified in Xenopsylla gerbilli minax and X. conforms conforms, ii) B. grahamii was firstly identified in X. gerbilli minax, and iii) B. elizabethae was firstly detected in Coptopsylla lamellifer ardua, Paradoxopsyllus repandus, and Nosopsyllus laeviceps laeviceps. Additionally, 3 Wolbachia endosymbionts were firstly found in X. gerbilli minax, X. conforms conforms, P. repandus, and N. laeviceps laeviceps. BLASTn analysis indicated 3 Bartonella species showed genotypic variation. Phylogenetic analysis revealed 3 Wolbachia endosymbionts were clustered into the non-Siphonaptera Wolbachia group. These findings extend our knowledge of the geographical distribution and carriers of B. rochalimae, B. grahamii, B. elizabethae, and Wolbachia spp. In the future, there is a need for China-Kazakhstan cooperation to strengthen the surveillance of flea-borne pathogens in wildlife.
Yicheng Yang,Jin Tong,Hongyin Ruan,Meihua Yang,Chunli Sang,Gang Liu,Wurelihazi Hazihan,Bin Xu,Sandor Hornok,Kadyken Rizabek,Kulmanova Gulzhan,Zhiqiang Liu,Yuanzhi Wang 대한기생충학열대의학회 2021 The Korean Journal of Parasitology Vol.59 No.1
To date, there is no report on the genetic diversity of ticks in these regions. A total of 370 representative ticks from the south and east regions of Kazakhstan (SERK) and Xinjiang Uygur Autonomous Region (XUAR) were selected for molecular comparison. A fragment of the mitochondrial cytochrome c oxidase subunit I (cox1) gene, ranging from 631 bp to 889 bp, was used to analyze genetic diversity among these ticks. Phylogenetic analyses indicated 7 tick species including Hyalomma asiaticum, Hyalomma detritum, Hyalomma anatolicum, Dermacentor marginatus, Rhipicephalus sanguineus, Rhipicephalus turanicus and Haemaphysalis erinacei from the SERK clustered together with conspecific ticks from the XUAR. The network diagram of haplotypes showed that i) Hy. asiaticum from Almaty and Kyzylorda Oblasts together with that from Yuli County of XUAR constituted haplogroup H-2, and the lineage from Chimkent City of South Kazakhstan was newly evolved; and ii) the R. turanicus ticks sampled in Israel, Almaty, South Kazakhstan, Usu City, Ulugqat and Baicheng Counties of XUAR were derivated from an old lineage in Alataw City of XUAR. These findings indicate that: i) Hy. asiaticum, R. turanicus and Ha. erinacei shared genetic similarities between the SERK and XUAR; and ii) Hy. marginatum and D. reticulatus show differences in their evolution.