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      • KCI등재

        Gene clustering and co-expression analysis for the identification of putative transcription factors associated with the genes of secondary metabolic pathways in Plantago ovata Forsk. and its wild allies

        Gupta Suruchi,Singh Ravail,Paul Prosenjit,Kaul Sanjana,Lattoo Surrinder K.,Dhar Manoj K. 한국식물생명공학회 2024 Plant biotechnology reports Vol.18 No.1

        Genus Plantago of Plantaginaceae family is bestowed with a repertoire of structurally diverse secondary metabolites that have not only been used as therapeutics but also effect the plant physiology by conferring adaptive advantages under stress. Assuming that domestication process in plants has influenced their secondary metabolites, we performed a comparative transcriptome of wild and cultivated species of Plantago to analyze the variation in the expression of genes related to sec- ondary metabolite pathways. GO and KEGG analysis of DEGs in wild species showed their enrichment in abiotic stresses, oxidation–reduction and secondary metabolite related pathways. Overall, we found upregulation of genes of carotenoid, flavonoid and phenylpropanoid, isoprenoid, terpenoid and alkaloid pathways in wild species of Plantago in particular, P. lanceolata while mucilage pathway-related genes showed higher expression in P. ovata. Moreover, transcriptome data pre- sented putative transcription factors associated with terpenoids, carotenoid and phenylpropanoid biosynthetic pathways which were also identified using co-expression analysis of cluster 9 (secondary metabolite enriched gene cluster). Taken together, the genomic resource obtained from the present study form a valuable repository of genetic information for elucidating and exploring the secondary metabolic circuitry of Plantagos. Further, information on the regulatory aspects of genes related to secondary metabolites, shall aid in the enhanced production of valuable metabolites in these plants.

      • KCI등재

        Diversity and Bioactive Potential of Culturable Fungal Endophytes of Medicinal Shrub Berberis aristata DC.: A First Report

        ( Supriya Sharma ),( Suruchi Gupta ),( Manoj K. Dhar ),( Sanjana Kaul ) 한국균학회 2018 Mycobiology Vol.46 No.4

        Bioactive natural compounds, isolated from fungal endophytes, play a promising role in the search for novel drugs. They are an inspiring source for researchers due to their enormous structural diversity and complexity. During the present study fungal endophytes were isolated from a well-known medicinal shrub, Berberis aristata DC. and were explored for their antagonistic and antioxidant potential. B. aristata, an important medicinal shrub with remarkable pharmacological properties, is native to Northern Himalayan region. A total of 131 endophytic fungal isolates belonging to eighteen species and nine genera were obtained from three hundred and thirty surface sterilized segments of different tissues of B. aristata. The isolated fungi were classified on the basis of morphological and molecular analysis. Diversity and species richness was found to be higher in leaf tissues as compared to root and stem. Antibacterial activity demonstrated that the crude ethyl acetate extract of 80% isolates exhibited significant results against one or more bacterial pathogens. Ethyl acetate extract of Alternaria macrospora was found to have potential antibacterial activity. Significant antioxidant activity was also found in crude ethyl acetate extracts of Alternaria alternata and Aspergillus flavus. Similarly, antagonistic activity of the fungal endophytes revealed that all antagonists possessed inhibition potential against more than one fungal pathogen. This study is an important step towards tapping endophytic fungal diversity for bioactive metabolites which could be a step forward towards development of novel therapeutic agents.

      • KCI등재

        Correlation of morphological variants of the soft palate and Need’s ratio in normal individuals: A digital cephalometric study

        Pradhuman Verma,Kanika Gupta Verma,Kikkeri Lakshminarayana Kumaraswam,Suman Basavaraju,Suresh K. Sachdeva,Suruchi Juneja 대한영상치의학회 2014 Imaging Science in Dentistry Vol.44 No.3

        Purpose: The present study was aimed to investigate the variation of soft palate morphology in different age and gender groups. The correlations of radiographic velar length (VL), velar width (VW), pharyngeal depth (PD), and Need’s ratio with soft palate variants were also studied in the North Indian subpopulation. Materials and Methods: The study sample consisted of 300 subjects aged between 15 and 45 (mean: 31.32) years. The velar morphology on lateral cephalograms was examined and grouped into six types. The results obtained were subjected to a statistical analysis to find the correlation between variants of the soft palate with gender and different age groups. Results: The most frequent type of soft palate was leaf shaped (48.7%), and the least common was crook shaped (3.0%) among both the genders and various age groups, showing a significant correlation. The mean VL, VW, and PD values were significantly higher in males and significantly correlated with the types of soft palate. A significant correlation was observed between the mean VL, VW, PD, and Need’s ratio with various age groups, showing an inconsistent pattern with an increase in age. The types of soft palate, gender, and Need’s ratio were also significantly correlated, with an overall higher mean value of the Need’s ratio among female subjects and the S-shaped soft palate. Conclusion: The knowledge of a varied spectrum of velar morphology and the variants of the soft palate help in a better understanding of the velopharyngeal closure and craniofacial anomalies.

      • SCOPUSKCI등재

        Correlation of morphological variants of the soft palate and Need's ratio in normal individuals: A digital cephalometric study

        Verma, Pradhuman,Verma, Kanika Gupta,Kumaraswam, Kikkeri Lakshminarayana,Basavaraju, Suman,Sachdeva, Suresh K.,Juneja, Suruchi Korean Academy of Oral and Maxillofacial Radiology 2014 Imaging Science in Dentistry Vol.44 No.3

        Purpose: The present study was aimed to investigate the variation of soft palate morphology in different age and gender groups. The correlations of radiographic velar length (VL), velar width (VW), pharyngeal depth (PD), and Need's ratio with soft palate variants were also studied in the North Indian subpopulation. Materials and Methods: The study sample consisted of 300 subjects aged between 15 and 45 (mean: 31.32) years. The velar morphology on lateral cephalograms was examined and grouped into six types. The results obtained were subjected to a statistical analysis to find the correlation between variants of the soft palate with gender and different age groups. Results: The most frequent type of soft palate was leaf shaped (48.7%), and the least common was crook shaped (3.0%) among both the genders and various age groups, showing a significant correlation. The mean VL, VW, and PD values were significantly higher in males and significantly correlated with the types of soft palate. A significant correlation was observed between the mean VL, VW, PD, and Need's ratio with various age groups, showing an inconsistent pattern with an increase in age. The types of soft palate, gender, and Need's ratio were also significantly correlated, with an overall higher mean value of the Need's ratio among female subjects and the S-shaped soft palate. Conclusion: The knowledge of a varied spectrum of velar morphology and the variants of the soft palate help in a better understanding of the velopharyngeal closure and craniofacial anomalies.

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