Cloning of Dextransucrase Gene from Leuconostoc citreum HJ-P4 and Its High-Level Expression in E. coli by Low Temperature Induction

Ah Rum Yi,So Ra Lee,Myoung Uoon Jang,Jung Mi Park,Hyun Ju Eom,Nam Soo Ham,Tae Jip Kim 한국미생물 · 생명공학회 2009 Journal of microbiology and biotechnology Vol.19 No.8

Prenatal diagnosis of interchromosomal insertion of Y chromosome heterochromatin in a family

Bom Yi Lee,Ju Yeon Park,Yeon Woo Lee,Ah Rum Oh,Shin Young Lee,So Yeon Park,Hyun Mee Ryu,Si Won Lee 대한의학유전학회 2017 대한의학유전학회지 Vol.14 No.2

Interchromosomal insertion of Y chromosome heterochromatin in an autosome was identified in a fetus and a family. A fetal karyotype was analyzed as 46,XX,dup(7)(?q22q21.1) in a referred amniocentesis at 16 weeks of gestation for advanced maternal age. In the familial karyotype analyses for identification of der(7), the mother, the first daughter and the maternal grandmother showed the same der(7) as the fetus’s. CBG-banding was positive at 7q22 region of der(7) that indicated inserted material was originated from heterochromatin. The origin of heterochromatic insertion region in der(7) of the fetus and the mother was found in Yq12 region by fluorescent in situ hybridization with a DYZ1 probe. In the specific analysis of Y chromosomal heterochromatic region of ins(7;Y) of the mother, 15 sequence tagged sites from Yp11.3 region including SRY to Yq11.223 region was not detected. Final karyotypes of the mother, the first daughter and the maternal grandmother were reported as 46,XX,der(7)ins(7;Y)(q21.3;q12q12). All female carriers of ins(7;Y) in the family showed normal phenotype and the mother and the maternal grandmother were fertile. A healthy girl was born at term. We report a rare case of familial interchromosomal insertion of Y chromosome heterochromatin detected only in female family members with normal phenotype that was diagnosed prenatally.

Prenatally Diagnosed Uncommon Mosaic Autosomal Trisomy

Bom-Yi Lee,So-Yeon Park,Moon-Hee Lee,Jin-Woo Kim,Ju-Yeon Park,Eun-Young Choi,Yeon-Woo Lee,Ah-Rum Oh,Shin-Young Lee,Min-Hyung Kim,Hyun-Mee Ryu 대한의학유전학회 2009 대한의학유전학회지 Vol.6 No.1

Prenatal diagnosis of rare autosome mosaicism involvingchromosomes other than chromosome 13, 18, 21 or the sex chromosome is encountered prognostic dilemma during genetic counseling. We report four cases of level Ⅲ uncommon mosaicism of trisomy 5, 16 and 20,diagnosed prenatally. In case 1 with mosaic trisomy 20, there was a higher mosaic ratio of trisomy 20 in the repeat amniocentesis (62.1%) than in the first (36.6%) with normal fetal ultrasound finding except for a relatively small aorta on a 3-vessel view of the fetal heart. Case 2 showed a low rate of mosaic trisomy 20 (5.25%) in cultured amniocytes but normal karyotype in the repeat amniocentesis, who delivered a normal healthy baby. Case 3 showed a 13.6% of trisomy 16 mosaicism in the 30 cells of cultured amniocytes. Sixty cells from a fetal blood sample at termination showed non-mosaic 46,XX normal karyotype, while skin fibroblasts had 22.5% trisomy 16 in 40 metaphases. The autopsy showed ventricular septal defect (VSD). Case 4 with low grade mosaicism (10.5%) of trisomy 5 resulted in elective termination, though the ultrasoumd showed growsly normal fetus. Although level Ⅲ mosaicism is regarded as true mosaicism, it is difficult to predict the outcome of the fetus with rare mosaic autosome trisomy. Therefore mosaic autosome trisomy of fetus should be carefully interpreted with more various approaches including repeat sampling and targeted fetal ultrasound. 산전에서 성염색체와 13번, 18번, 21번 염색체를 제외한상 염색체의 모자이시즘은 발생빈도가 낮고 증례보고가 적어서 예후 예측이 어렵다. 저자들은 삼염색체성 5번, 16번, 20번의 산전진단 4례를 보고하고자 한다. 모자잌 삼염색체성 20번 2례 중 증례 1은 양수 염색체 검사에서 36.6%의 모자이시즘을 보였으나 재검한 양수 검사에서는 보다 높은 빈도 (62.1%)를 보였다. 증례 2에서는 양수 염색체 검사에서 모자이시즘 삼염색체성 20번이 5.25% 였으나, 재검 양수천자결과는 정상 핵형을 보였다. 증례 3은 30개의 양수세포에서 삼염색체성 16번의 모자이시즘이 13.6% 관찰되었다. 임신 종결 후, 총 60개의 태아 혈액 세포에서 모자이시즘 없는 정상 핵형이 관찰되었으나 태아의 피부 섬유아세포에서 얻은 40개의 중기상 세포에서는 22.5%의 삼염색체성 16번 모자이시즘을 보였다. 부검결과 심실중격결손(ventricular septal defect)이 관찰되었다. 증례 4는 76개의 중기상 세포에서 10.5%의 삼염색체성 5번 모자이시즘을 보였으나 태아의 초음파검사에서는 정상소견을 보였다. Level Ⅲ 모자이시즘은 진성 모자이시즘으로 간주되지만 발생빈도가 낮은 상염색체의 삼염색체성 모자이시즘은 태아의 예후를 예견하기 어려우므로 산전 진단시 여러 조직의 재검 및 태아 초음파 소견과 함께 다양한 임상적 접근 방법으로 그 해석에 신중을 기해야 할 것으로 사료된다.

An unusual de novo duplication 10p/deletion 10q syndrome

Bom-Yi Lee,Ju-Yeon Park,Yeon-Woo Lee,Ah-Rum Oh,Shin-Young Lee,Eun-Young Choi,Moon-Young Kim,Hyun-Mee Ryu,So-Yeon Park 대한의학유전학회 2015 대한의학유전학회지 Vol.12 No.1

We herein report an analysis of a female baby with a de novo dup(10p)/del(10q) chromosomal aberration. A prenatal cytogenetic analysis was performed owing to abnormal ultrasound findings including a choroid plexus cyst, prominent cisterna magna, and a slightly medially displaced stomach. The fetal karyotype showed additional material attached to the terminal region of chromosome 10q. Parental karyotypes were both normal. At birth, the baby showed hypotonia, upslanting palpebral fissures, a nodular back mass, respiratory distress, neonatal jaundice and a suspicious polycystic kidney. We ascertained that the karyotype of the baby was 46,XX,der(10)(pter→q26.3::p11.2→pter) by cytogenetic and molecular cytogenetic analyses including high resolution GTG-and RBG-banding, fluorescence in situ hybridization, comparative genomic hybridization, and short tandem repeat marker analyses. While almost all reported cases of 10p duplication originated from one of the parents with a pericentric inversion, our case is extraordinarily rare as the de novo dup(10p)/ del(10q) presumably originated from a rearrangement at the premeiotic stage of the parental germ cell or from parental germline mosaicism.

An unusual de novo duplication 10p/deletion 10q syndrome: The first case in Korea

Lee, Bom-Yi,Park, Ju-Yeon,Lee, Yeon-Woo,Oh, Ah-Rum,Lee, Shin-Young,Choi, Eun-Young,Kim, Moon-Young,Ryu, Hyun-Mee,Park, So-Yeon Korean Society of Medical Genetics and Genomics 2015 대한의학유전학회지 Vol.12 No.1

We herein report an analysis of a female baby with a de novo dup(10p)/del(10q) chromosomal aberration. A prenatal cytogenetic analysis was performed owing to abnormal ultrasound findings including a choroid plexus cyst, prominent cisterna magna, and a slightly medially displaced stomach. The fetal karyotype showed additional material attached to the terminal region of chromosome 10q. Parental karyotypes were both normal. At birth, the baby showed hypotonia, upslanting palpebral fissures, a nodular back mass, respiratory distress, neonatal jaundice and a suspicious polycystic kidney. We ascertained that the karyotype of the baby was 46,XX,der(10)($pter{\rightarrow}q26.3::p11.2{\rightarrow}pter$) by cytogenetic and molecular cytogenetic analyses including high resolution GTG-and RBG-banding, fluorescence in situ hybridization, comparative genomic hybridization, and short tandem repeat marker analyses. While almost all reported cases of 10p duplication originated from one of the parents with a pericentric inversion, our case is extraordinarily rare as the de novo dup(10p)/del(10q) presumably originated from a rearrangement at the premeiotic stage of the parental germ cell or from parental germline mosaicism.

Prenatal diagnosis of interchromosomal insertion of Y chromosome heterochromatin in a family

Lee, Bom-Yi,Park, Ju-Yeon,Lee, Yeon-Woo,Oh, Ah-Rum,Lee, Shin-Young,Park, So-Yeon,Ryu, Hyun-Mee,Lee, Si-Won Korean Society of Medical Genetics and Genomics 2017 대한의학유전학회지 Vol.14 No.2

Interchromosomal insertion of Y chromosome heterochromatin in an autosome was identified in a fetus and a family. A fetal karyotype was analyzed as 46,XX,dup(7)(?q22q21.1) in a referred amniocentesis at 16 weeks of gestation for advanced maternal age. In the familial karyotype analyses for identification of der(7), the mother, the first daughter and the maternal grandmother showed the same der(7) as the fetus's. CBG-banding was positive at 7q22 region of der(7) that indicated inserted material was originated from heterochromatin. The origin of heterochromatic insertion region in der(7) of the fetus and the mother was found in Yq12 region by fluorescent in situ hybridization with a DYZ1 probe. In the specific analysis of Y chromosomal heterochromatic region of ins(7;Y) of the mother, 15 sequence tagged sites from Yp11.3 region including SRY to Yq11.223 region was not detected. Final karyotypes of the mother, the first daughter and the maternal grandmother were reported as 46,XX,der(7)ins(7;Y)(q21.3;q12q12). All female carriers of ins(7;Y) in the family showed normal phenotype and the mother and the maternal grandmother were fertile. A healthy girl was born at term. We report a rare case of familial interchromosomal insertion of Y chromosome heterochromatin detected only in female family members with normal phenotype that was diagnosed prenatally.

Paracentric Inversions Found in Prenatal Diagnosis

Shin Yeong Lee,Bom Yi Lee,Ju Yeon Park,Eun Young Choi,Yeon Woo Lee,Ah Rum Oh,Hyun Mee Ryu,So Yeon Park 대한의학유전학회 2013 대한의학유전학회지 Vol.10 No.2

Purpose: This study was designed to confirm whether the paracentric inversions of fetuses and parents may be harmless. Materials and methods: We report 10 cases (0.14%) with paracentric inversions among 7,181 prenatal cases observed during prenatal diagnosis performed at Cheil General Hospital between January 2009 and June 2013. We used cytogenetic GTLand RBG-banding techniques. Results: Of the 10 cases, nine cases were transmitted from each of the parents, and one case was de novo. Nine cases were phenotypically normal up to one month of age after birth. One case was lost to follow-up. We present prenatal diagnosis and follow-up examination of the fetuses with paracentric inversion. Conclusion: Based on our cases, most paracentric inversions are considered to be harmless. The precise identification of paracentric inversions might be clinically important and helpful for genetic counseling.

Development of a High-Throughput Screening Method for Recombinant Escherichia coli with Intracellular Dextransucrase Activity

So-Ra Lee,Ah-Rum Yi,Hong-Gyun Lee,장명운,박정미,한남수,김태집 한국미생물학회 2011 The journal of microbiology Vol.49 No.2

To efficiently engineer intracellular dextransucrase (DSase) expression in Escherichia coli, a high-throughput screening method was developed based on the polymer-forming activity of the enzyme. Recombinant E. coli containing the Leuconostoc citreum DSase (LcDS) gene was grown on Luria-Bertani agar plates, containing 2% sucrose, at 37°C for 8 h. The plates were then evenly overlaid with 0.6% soft agar, containing 1.2 mg/ml D-cycloserine, and incubated at 30°C to allow gradual cell disruption until a dextran polymer grew through the overlaid layer. A significant correlation between dextran size and enzyme activity was established and applied for screening truncated mutants with LcDS activity.

무정자증 불임남성에서 관찰된 SRY 유전자의 중복을 동반한 일동원체성 derivative Y 염색체

최은영(Eun Young Choi),이봄이(Bom Yi Lee),박주연(Ju Yeon Park),이연우(Yeon Woo Lee),오아름(Ah Rum Oh),이신영(Shin Young Lee),김신영(Shin Young Kim),한유정(You Jung Han),이미범(Mee Bum Lee),류현미(Hyun Mee Ryu),서주태(Ju Tae Seo),박소연( 대한의학유전학회 2010 대한의학유전학회지 Vol.7 No.2

Y 염색체의 구조적 이상은 남성의 정상적인 고환의 분화와 정자생성과정에 영향을 미친다. 본 증례의 무정자증 남성의 혈액세포에서 관찰된 비정상 Y 염색체는 SRY를 포함한 부분적 단완 중복과 Yq12 이질염색질 결실로 재배열된 일동원체성 derivative Y 염색체이다. 이러한 형태의 Y 염색체에 대해서는 매우 드물게 보고되어 있다. 이는 분자세포유전학 및 분자유전학 검사를 통하여 46,X,der(Y)(pter→q11.23::p11.2→pter).ish der(Y)(DYZ3+,DYZ1-,SRY++) 의 결과를 얻었다. 증례의 남성은 비정상 Y 염색체를 가졌음에도 불구하고 정상적인 고환의 크기와 혈액내 성호르몬의 수치는 정상이었다. 하지만 양측성 정계정맥류와 고환생검결과 정자형성기능저하증의 소견을 보였다. 이러한 비정상 Y 염색체는 부계의 감수분열 또는 배발생 초기 단계에서 Y 염색체 자매염색분체의 재배열 또는 Y 염색체내 비대립동종재조합(Non-allelic homologous recombination) 현상 때문에 일어난 것으로 생각되며 환자의 생식세포 분열과정 중 X-Y 성염색체 PAR1 (pseudoautosomal region 1) 부위가 접합하는 2가염색체 (X-Y bivalent) 형성장애기전으로 정자생성 또는 정자성숙 단계에 문제가 생긴 것으로 생각된다. 또한 남성특이영역(male specific region of the Y chromosome, MSY)에서 불임과 관련된 유전자들의 결실과 변이 등의 원인도 배제할 수 없을 것이다. 본 증례는 무정자증 불임남성의 생식과 관련된 표현형이 다양한 원인으로 결정될 수 있음을 시사하며 아울러 불임남성에 대한 보다 정확하고 자세한 분자ㆍ세포 유전학적 분석들이 불임남성의 치료에도 도움이 될 것이라 생각한다. Structural abnormalities of the Y chromosome affect normal testicular differentiation and spermatogenesis. The present case showed a rare monocentric derivative Y chromosome with partial duplication of Yp including the SRY gene and deletion of Yq12 heterochromatin. The karyotype was 46,X,der(Y) (pter→q11.23::p11.2→pter).ish der(Y)(DYZ3+,DYZ1-,SRY++), confirmed through a FISH study. Even though the patient possessed an abnormal Y chromosome, testicular biopsy showed normal testicular volumes in the proband, with gonadal hormonal levels in the normal range but bilateral varicocele and hypospermatogenesis. We speculate that the abnormal Y chromosome arose from sister chromatids during Y chromosome recombination or intra chromosomal NAHR (non-allelic homologous recombination) during meiosis in the patient’s father or in the very early stages of embryogenesis. The derivative Y chromosome might interfere in the meiotic stage of spermatogenesis, leading to the developmental arrest of germ cells. The present case illustrates that the infertility phenotype can have various causes. Also, it emphasizes the importance of accurate and various genetic analyses and could aid in male infertility treatment.

Prenatal Diagnosis of the 22q11.2 Duplication Syndrome

Moon Hee Lee,So Yeon Park,Bom Yi Lee,Eun Young Choi,Jin Woo Kim,Ju Yeon Park,Yeon Woo Lee,Ah Rum Oh,Shin Young Lee,Jae Hyug Yang,Hyun Mee Ryu 대한의학유전학회 2009 대한의학유전학회지 Vol.6 No.2

22q11.2 미세중복 증후군은 학습장애, 선천적 기형에서부터 정상에 이르기까지 다양한 표현형을 나타내는 증후군으로써, 22q11.2 미세결실 증후군인 DiGeorge 증후군과 동일한 위치에서 발생하는 질환이며, 이러한 원인은 유전적 불안정성이 높은 low-copy repeats (LCR) 부위에서 일어나는 유전체의 결손이나 중복에 의해 형성되는 것으로 보고되고 있다. 최근 array CGH가 임상분야에 적용됨에 따라 22q11.2 미세중복증후군의 진단이 증가되고 있다. 이론적으로 22q11.2 부위의 미세중복이나 미세결실의 빈도는 동일하게 발생해야 하지만, 현재까지 미세결실에 비해 미세중복의 증례보고는 상대적으로 드물며 이는 증상이 없는 경우가 많기 때문인 것으로 알려져 있다. 특히 이전 보고에서 산전에 발견된 미세중복의 증례는 단 1례 만이 보고된 바 있다. 저자들은 산전에 진단된 22q11.2 미세중복 증후군 1례의 보고를 통해 유전상담의 중요성과 array CGH의 임상 적용에 관하여 논하고자 한다. The 22q11.2 duplication syndrome is an extremely variable disorder with a phenotype ranging from normal to congenital defects and learning disabilities. Recently, the detection rate of 22q11.2 duplication has been increased by molecular techniques, such as array CGH. In this study, we report a familial case of 22q11.2 duplication detected prenatally. Her first pregnancy was terminated because of 22q11.2 duplication detected incidentally by BAC array CGH. The case was referred due to second pregnancy with same 22q11.2 duplication. We perfomed repeat amniocentesis for karyotype and FISH analysis. Karyotype analysis from amniocytes and parental lymphocytes were normal, while FISH analysis of interphase cells presented a duplication of 22q11.2 in the fetus and phenotypically normal mother. The fetal ultrasound showed grossly normal finding. After genetic counseling about variable phenotype with intrafamilial variability with 50% recurrence rate, the couple decided to continue the pregnancy. The newborn had no apparent congenital abnormalities until 2 weeks after birth. We recommend that family members of patients with a 22q11.2 duplication be tested by the interphase FISH analysis. Also, we point out the importance of genetic counseling and an evaluation of the clinical relevance of diagnostic test results.