1 Robinson MD, "edgeR : a Bioconductor package for diferential expression analysis of digital gene expression data" 26 : 139-140, 2010
2 Yu G, "clusterProfler : an R package for comparing biological themes among gene clusters" 16 : 284-287, 2012
3 Xu Y, "Transcriptome sequencing and whole genome expression profling of chrysanthemum under dehydration stress" 14 : 662-, 2013
4 Zhao Q, "Transcriptome comparative analysis of salt stress responsiveness in chrysanthemum(Dendranthema grandiforum)roots by illumina-and single-molecule real-timebased RNA sequencing" 37 : 1016-1030, 2018
5 Li C, "Transcriptome analysis reveals ginsenosides biosynthetic genes, microRNAs and simple sequence repeats in Panax ginseng C. A Meyer" 14 : 245-, 2013
6 Wu P, "Transcriptome analysis reveals diferentially expressed genes associated with propamocarb response in cucumber(Cucumis sativus L. )fruit" 35 : 2393-2406, 2013
7 Shen GM, "Transcriptome analysis of the oriental fruit fy(Bactrocera dorsalis)" 6 : e29127-, 2011
8 Dong W, "Transcriptome analysis of the molecular mechanism of Chrysanthemum fower color change under short-day photoperiods" 146 : 315-328, 2020
9 Yue J, "Transcriptome analysis of diferentially expressed unigenes involved in favonoid biosynthesis during fower development of Chrysanthemum morifolium “Chuju.”" 8 : 13414-, 2018
10 Wang K, "Transcriptome analysis of chrysanthemum(Dendranthema grandiforum)in response to low temperature stress" 19 : 319-, 2018
11 Li Q, "Transcriptome Profling Unravels a Vital Role of Pectin and Pectinase in Anther Dehiscence in Chrysanthemum" 20 : 5865-, 2019
12 Huang H, "Transcriptome Analysis of Chrysanthemum lavandulifolium Response to Salt Stress and Overexpression a K+ Transport ClAKT Gene-enhanced Salt Tolerance in Transgenic Arabidopsis" 144 : 219-235, 2019
13 Gao WJ, "Transcriptional responses for biosynthesis of favor volatiles in methyl jasmonate-treated Chrysanthemum indicum var. aromaticum leaves" 147 : 112254-, 2020
14 Trapnell C, "Transcript assembly and quantifcation by RNA-Seq reveals unannotated transcripts and isoform switching during cell diferentiation" 28 : 511-515, 2010
15 Liu QH, "The investigation on geographical distribution, ecological habit and storage quantity on a new resource plant of Hubei, Dendranthema indicum(L. )Des Monl. var. aromaticum" 1 : 239-245, 1983
16 Chen SM, "The identifcation of favonoids and the expression of genes of anthocyanin biosynthesis in the chrysanthemum fowers" 56 : 458-464, 2012
17 Kang JH, "The favonoid biosynthetic enzyme chalcone isomerase modulates terpenoid production in glandular trichomes of tomato" 164 : 1161-1174, 2014
18 Prinsloo G, "The efects of season and water availability on chemical composition, secondary metabolites and biological activity in plants" 17 : 889-902, 2018
19 Hodaei M, "The efect of water stress on phytochemical accumulation, bioactive compounds and expression of key genes involved in favonoid biosynthesis in Chrysanthemum morifolium L" 120 : 295-304, 2018
20 Bairoch A, "The Universal Protein Resource(UniProt)" 33 : D154-D159, 2005
21 Song C, "The Chrysanthemum nankingense Genome Provides Insights into the Evolution and Diversifcation of Chrysanthemum Flowers and Medicinal Traits" 11 : 1482-1491, 2018
22 Xu JJ, "Study on spectrumefect relationship between fngerprints of essential oil from Shennong Xiangju and the in vitro antioxidant activities" 36 : 1823-1830, 2016
23 Zhou J, "Studies on the Problem of Origin of Chinese Garden Chrysanthemum" Beijing Forestry University 2009
24 Xia JH, "Sesquiterpenoids and triterpenoids from Abies holophylla and their bioactivities" 74 : 178-184, 2012
25 Do TK, "Secondary metabolites isolation in natural products chemistry : comparison of two semipreparative chromatographic techniques(high pressure liquid chromatography and high performance thin-layer chromatography)" 1325 : 256-260, 2014
26 Osbourn A, "Secondary metabolic gene clusters : evolutionary toolkits for chemical innovation" 26 : 449-457, 2010
27 Dobin A, "STAR : ultrafast universal RNA-seq aligner" 29 : 15-21, 2013
28 Han Z, "SSR marker development and intraspecifc genetic divergence exploration of Chrysanthemum indicum based on transcriptome analysis" 19 : 291-, 2018
29 Yang L, "Response of Plant Secondary Metabolites to Environmental Factors" 23 : 762-, 2018
30 Wang L, "Research progress of the antiviral bioactivities of natural favonoids" 10 : 271-283, 2020
31 Petroni K, "Recent advances on the regulation of anthocyanin synthesis in reproductive organs" 181 : 219-229, 2011
32 Hichri I, "Recent advances in the transcriptional regulation of the favonoid biosynthetic pathway" 62 : 2465-2483, 2011
33 Wang Z, "RNA-Seq: a revolutionary tool for transcriptomics" 10 : 57-63, 2009
34 Hartley SW, "QoRTs : a comprehensive toolset for quality control and data processing of RNA-Seq experiments" 16 : 224-, 2015
35 Nagatomo Y, "Purifcation, molecular cloning and functional characterization of favonoid C-glucosyltransferases from Fagopyrum esculentum M. (buckwheat)cotyledon" 80 : 437-448, 2014
36 Lalitha S, "Primer Premier 5" 1 : 270-272, 2000
37 Grotewold E, "Plant metabolic diversity : a regulatory perspective" 10 : 57-62, 2005
38 Ma YP, "Origins of cultivars of Chrysanthemum-Evidence from the chloroplast genome and nuclear LFY gene" 58 : 925-944, 2020
39 Moses T, "OSC2 and CYP716A14v2 catalyze the biosynthesis of triterpenoids for the cuticle of aerial organs of Artemisia annua" 27 : 286-301, 2015
40 Hanson JR, "Natural Products : The Secondary" Royal Society of Chemistry 2003
41 Wang N, "MYB12 and MYB22 play essential roles in proanthocyanidin and favonol synthesis in red-feshed apple(Malus sieversii f. niedzwetzkyana)" 90 : 276-292, 2017
42 Dubos C, "MYB transcription factors in Arabidopsis" 15 : 573-581, 2010
43 Li J, "Long read reference genome-free reconstruction of a full-length transcriptome from Astragalus membranaceus reveals transcript variants involved in bioactive compound biosynthesis" 3 : 17031-, 2017
44 Almeida Rezende B, "Lemos VS(2016)Vascular efects of favonoids" 23 : 87-102, 2016
45 Allan AC, "Laing WA(2008)MYB transcription factors that colour our fruit" 13 : 99-102, 2008
46 Zhao CL, "Key enzymes of triterpenoid saponin biosynthesis and the induction of their activities and gene expressions in plants" 5 : 1147-1158, 2010
47 Kanehisa M, "KEGG for linking genomes to life and the environment" 36 : D480-484, 2008
48 Boutanaev AM, "Investigation of terpene diversifcation across multiple sequenced plant genomes" 112 : E81-E88, 2015
49 He L, "Hybrid Sequencing of Full-Length cDNA Transcripts of Stems and Leaves in Dendrobium ofcinale" 8 : 257-, 2017
50 Anders S, "HTSeq–a Python framework to work with high-throughput sequencing data" 31 : 166-169, 2015
51 Shi SG, "Genomewide transcriptome analysis of genes involved in favonoid biosynthesis between red and white strains of Magnolia sprengeri pamp" 15 : 706-, 2014
52 Ashburner M, "Gene ontology : tool for the unifcation of biology" 25 : 25-29, 2000
53 Jiang YFY, "Gene mining and identifcation of a favone synthase II involved in favones biosynthesis by transcriptomic analysis and targeted favonoid profling in Chrysanthemum indicum L" 134 : 244-256, 2019
54 Nutzmann HW, "Gene clustering in plant specialized metabolism" 26 : 91-99, 2014
55 Chen J, "Full-length transcriptome sequences and the identifcation of putative genes for favonoid biosynthesis in safower" 19 : 548-, 2018
56 Xu Z, "Full-length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to diferent root tissues of Salvia miltiorrhiza and tanshinone biosynthesis" 82 : 951-961, 2015
57 Yao LH, "Flavonoids in food and their health benefts" 59 : 113-122, 2004
58 Dixon RA, "Flavonoids and isofavonoids : from plant biology to agriculture and neuroscience" 154 : 453-457, 2010
59 Falcone Ferreyra ML, "Flavonoids : biosynthesis, biological functions, and biotechnological applications" 3 : 222-, 2012
60 Winkel-Shirley B, "Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology" 126 : 485-493, 2001
61 Rao VPS, "Extraction of essential oil and its applications"
62 Parkinson J, "Expressed sequence tags: an overview" 533 : 1-12, 2009
63 Oyama-Okubo N, "Emission mechanism of foral scent in Petunia axillaris" 69 : 773-777, 2005
64 Tao X, "Digital gene expression analysis based on integrated de novo transcriptome assembly of sweet potato [Ipomoea batatas(L. )Lam]" 7 : e36234-, 2012
65 Anders S, "Differential expression analysis for sequence count data" 11 : R106-, 2010
66 Lu JQ, "Determination of Volatile Oil and Total Flavone from Various Species of Dendranthema morifolium in Hubei"
67 Zhang XY, "Comprehensive transcriptome analysis of grafting onto Artemisia scoparia W. to afect the aphid resistance of chrysanthemum(Chrysanthemum morifolium T. )" 20 : 776-, 2019
68 Shadeo A, "Comprehensive serial analysis of gene expression of the cervical transcriptome" 8 : 142-, 2007
69 Zhang JJ, "Comprehensive characterization for ginsenosides biosynthesis in ginseng root by integration analysis of chemical and transcriptome" 22 : 889-, 2017
70 Zhao N, "Comparative transcriptome analysis of waterloggingsensitive and waterlogging-tolerant Chrysanthemum morifolium cultivars under waterlogging stress and reoxygenation conditions" 19 : 1455-, 2018
71 Gong FJ, "Chemical Constituents of the Flowers of Dendranthema indicum var. aromaticum" 23 : 610-612, 2005
72 Wu HJ, "Chemical Composition and Antimicrobial Mechanism of Essential Oil from Dendranthema indicum var. aromaticum" 33 : 35-39, 2012
73 Schwab W, "Biosynthesis of plant-derived favor compounds" 54 : 712-732, 2008
74 Jian L, "Analysis on aroma compositions in fowers, stems and leaves of Chrysanthemum indicum var aromaticum" 42 : 87-92, 2014
75 Liu B, "Analysis of transcriptome diferences between resistant and susceptible strains of the citrus red mite Panonychus citri(Acari : Tetranychidae)" 6 : e28516-, 2011
76 Livak KJ, "Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T))Method" 25 : 402-408, 2001
77 Wang C, "Analysis of Volatile Organic Compounds from Dendranthema indicum var. aromaticum by Headspace Gas Chromatography-Mass Spectrometry and Accurate Mass Measurement" 43 : 2297-2310, 2010
78 Kumari S, "Advances in breeding of chrysanthemum: a review" 8 : 1631-1643, 2019
79 Liu QH, "A new variety of Dendranthema Gaertn from Shennongjia of Hubei" 1 : 237-238, 1983
80 Huang W, "A R2R3-MYB transcription factor from Epimedium sagittatum regulates the favonoid biosynthetic pathway" 8 : e70778-, 2013
81 Chen S, "454 EST analysis detects genes putatively involved in ginsenoside biosynthesis in Panax ginseng" 30 : 1593-1601, 2011