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      KCI등재 SCIE SCOPUS

      Confirmation of Parentage of the Pear Cultivar ‘Niitaka’ (Pyrus pyrifolia) Based on Self-incompatibility Haplotypes and Genotyping with SSR Markers

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      https://www.riss.kr/link?id=A104995043

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      다국어 초록 (Multilingual Abstract)

      The parentage of the horticulturally important pear cultivar ‘Niitaka’ was confirmed by determining its S -genotypes based on the S-RNase and PpSFBB-γ genes, and genotyping using simple sequence repeat (SSR) markers. Previous reports suggested th...

      The parentage of the horticulturally important pear cultivar ‘Niitaka’ was confirmed by determining its S -genotypes based on the S-RNase and PpSFBB-γ genes, and genotyping using simple sequence repeat (SSR) markers. Previous reports suggested that the cultivars ‘Amanogawa’ and ‘Imamuraaki’ were the parents of ‘Niitaka’, although the cultivars ‘Chojuro’ and ‘Shinchu’ were also examined as candidate parents, along with two other cultivars. In the present study, the S -genotype of ‘Niitaka’ was determined to be S 3S 9. The S 9-RNase of ‘Niitaka’ was found to be likely inherited from the parent ‘Amanogawa’ (S 1S 9) and the S 3-RNase from ‘Chojuro’ (S 3S 5) or ‘Shinchu’ (S 3S 5). Based on the S-genotypes, the cultivar ‘Imamuraaki’ (S 1S 6) had no contribution to the parentage of ‘Niitaka’ (S 3S 9). A total of 67 polymorphic SSR markers were used to further confirm the parentage of ‘Niitaka’. Discrepancies were found at several SSR loci between ‘Niitaka’ and the cultivars ‘Imamuraaki’ and ‘Shinchu’, whereas ‘Niitaka’ inherited alleles from ‘Amanogawa’ and ‘Chojuro’ at all SSR loci. Therefore, our findings established that ‘Amanogawa’ and ‘Chojuro’ are the parents of pear cultivar ‘Niitaka’, and not ‘Imamuraaki’ as previously reported.

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      참고문헌 (Reference)

      1 황해성, "황록색 고품질 여름배 ‘조생황금’ 육성" 한국원예학회 23 (23): 56-59, 2005

      2 황해성, "고품질 대과 조생종 배 ‘한아름’ 육성" 한국원예학회 23 (23): 60-63, 2005

      3 Shin IS, "‘Sooyoung’: a mid-season pear (Pyrus pyrifolia Nakai) cultivar with high soluble solids and medium size" 61 : 170-173, 2007

      4 Neff MM, "dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms:experimental applications in Arabidopsis thaliana genetics" 14 : 387-392, 1998

      5 Kikuchi A, "Some studies on pear and pear breeding" 53 : 1-104, 1927

      6 Takasaki T, "Sequence of the S9-RNase cDNA and PCR-RFLP system for discriminating S1- to S9-allele in Japanese pear" 135 : 157-167, 2004

      7 Sassa H, "S locus F-box brothers :multiple and pollen-specific F-box genes with S haplotype-specific polymorphisms in apple and pear" 175 : 1869-1881, 2007

      8 Ishimizu T, "S -genotype of Japanese pear ‘Housui’" 67 : 35-38, 1998

      9 Castillo C, "Reconsideration of S-genotype assignments and discovery of a new allele based on S-RNase PCRR-FLP in Japanese pear cultivars" 51 : 5-11, 2001

      10 Kajiura I, "Recent progress in Japanese pear (Pyrus pyrifolia ) breeding and descriptions of cultivars based on literature review" 1 : 1-329, 1990

      1 황해성, "황록색 고품질 여름배 ‘조생황금’ 육성" 한국원예학회 23 (23): 56-59, 2005

      2 황해성, "고품질 대과 조생종 배 ‘한아름’ 육성" 한국원예학회 23 (23): 60-63, 2005

      3 Shin IS, "‘Sooyoung’: a mid-season pear (Pyrus pyrifolia Nakai) cultivar with high soluble solids and medium size" 61 : 170-173, 2007

      4 Neff MM, "dCAPS, a simple technique for the genetic analysis of single nucleotide polymorphisms:experimental applications in Arabidopsis thaliana genetics" 14 : 387-392, 1998

      5 Kikuchi A, "Some studies on pear and pear breeding" 53 : 1-104, 1927

      6 Takasaki T, "Sequence of the S9-RNase cDNA and PCR-RFLP system for discriminating S1- to S9-allele in Japanese pear" 135 : 157-167, 2004

      7 Sassa H, "S locus F-box brothers :multiple and pollen-specific F-box genes with S haplotype-specific polymorphisms in apple and pear" 175 : 1869-1881, 2007

      8 Ishimizu T, "S -genotype of Japanese pear ‘Housui’" 67 : 35-38, 1998

      9 Castillo C, "Reconsideration of S-genotype assignments and discovery of a new allele based on S-RNase PCRR-FLP in Japanese pear cultivars" 51 : 5-11, 2001

      10 Kajiura I, "Recent progress in Japanese pear (Pyrus pyrifolia ) breeding and descriptions of cultivars based on literature review" 1 : 1-329, 1990

      11 Kakui H, "Polymorphisms of SFBB-γ and its use for S genotyping in Japanese pear (Pyrus pyrifolia )" 26 : 1619-1625, 2007

      12 Kimura T, "Parentage analysis in pear cultivars characterized by SSR marker" 72 : 182-189, 2003

      13 Kajiura M, "New Japanese pear cultivar ‘Hakko’ and ‘Hosui’" 1 : 1-12, 1974

      14 Yamamoto T, "Identification of quince varieties using SSR markers developed from pear and apple" 54 : 239-244, 2004

      15 Sawamura Y, "Identification of parentage of Japanese pear ‘Housui’" 73 : 511-518, 2004

      16 Sawamura Y, "Identification of parent-offspring relationships in 55Japanese pear cultivars using S-RNase allele and SSR markers" 77 : 364-373, 2008

      17 양세환, "Hepatitis C Virus Core Inhibits the Fas-mediated p38 Mitogen Activated Kinase Signaling Pathway in Hepatocytes" 한국분자세포생물학회 13 (13): 444-451, 2002

      18 Hiratsuka S, "Estimation of self-incompatibility genotype in Japanese pear cultivars by stylar protein analysis" 67 : 491-496, 1998

      19 Katsumata Y, "Estimating probabilities and dealing with mutations in paternity testing:verification of DNA testing with commercially available STR kits" 55 : 205-216, 2001

      20 Yamamoto T, "Development of microsatellite markers in Japanese pear (Pyrus pyrifolia Nakai)" 2 : 14-16, 2002

      21 Yamamoto T, "DNA profiling of fresh and processed fruits in pear" 56 : 165-171, 2006

      22 Kim H, "Cloning of a new S-RNase and development of a PCR-RFLP system for the determination of the S-genotypes of Japanese pear" 57 : 159-164, 2007

      23 Hwang HS, "Breeding of the new early season pear cultivar ‘Shincheon’" 587 : 299-320, 2002

      24 Hashiyada M, "Allele frequency and application to paternity test of STR loci in Japanese population utilizing multiplex fluorescent PCR kit" 6 : 152-155, 1997

      25 Shin IS, "Achievements of pear breeding in Korea" 596 : 247-250, 2002

      26 Kim YS, "A new late-season pear cultivar ‘Chuwhangbae’" 28 : 57-61, 1986

      27 Washio K, "A new Japanese pear cultivar, ‘Kirari’" 58 : 1-5, 2006

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      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.92 0.74 0.83
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.77 0.73 1.115 0.19
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