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    Impact of the Synthetic Scaffold Strategy on the Metabolic Pathway Engineering

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    https://www.riss.kr/link?id=A108652947

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    다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

    For the development of the efficient bio-refinery process or biochemical producer, metabolic engineering has become an attractive choice recently. However, engineered metabolic pathways often suffer from flux imbalances due to a lack of corresponding regulatory mechanisms associated with natural metabolism. The interaction among different enzymes within a metabolic pathway plays an important role in regulating the efficiency of metabolic processes. Consequently, the creation of protein scaffolds has helped with the spatial co-localization of proteins in metabolic engineering. Research on protein scaffolds indicated scaffold systems may enhance metabolic productivity further. In this review, the specificity, selectivity, and regulatory mechanisms of protein-protein interactions are discussed in the context of the important effects that they exert on various biological processes.
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    For the development of the efficient bio-refinery process or biochemical producer, metabolic engineering has become an attractive choice recently. However, engineered metabolic pathways often suffer from flux imbalances due to a lack of corresponding ...

    For the development of the efficient bio-refinery process or biochemical producer, metabolic engineering has become an attractive choice recently. However, engineered metabolic pathways often suffer from flux imbalances due to a lack of corresponding regulatory mechanisms associated with natural metabolism. The interaction among different enzymes within a metabolic pathway plays an important role in regulating the efficiency of metabolic processes. Consequently, the creation of protein scaffolds has helped with the spatial co-localization of proteins in metabolic engineering. Research on protein scaffolds indicated scaffold systems may enhance metabolic productivity further. In this review, the specificity, selectivity, and regulatory mechanisms of protein-protein interactions are discussed in the context of the important effects that they exert on various biological processes.

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    참고문헌 (Reference)

    1 Beck, Z. Q., "Utilization of phosphoketolase in the production of mevalonate, isoprenoid precursors, and isoprene"

    2 Moon, T. S., "Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. coli" 12 : 298-305, 2010

    3 Miles, E. W., "The molecular basis of substrate channeling" 274 : 12193-12196, 1999

    4 Dwidar, M., "The future of butyric acid in industry" 2012 : 471417-, 2012

    5 Dinkel, H., "The eukaryotic linear motif resource ELM: 10 years and counting" 42 (42): D259-D266, 2014

    6 Bauer, H., "The dual role of zonula occludens (ZO)proteins" 2010 : 402593-, 2010

    7 Wang, Y., "Synthetic scaffolds increased resveratrol biosynthesis in engineered yeast cells" 157 : 258-260, 2012

    8 Dueber, J. E., "Synthetic protein scaffolds provide modular control over metabolic flux" 27 : 753-759, 2009

    9 Horn, A. H. C., "Synthetic protein scaffolds based on peptide motifs and cognate adaptor domains for improving metabolic productivity" 3 : 191-, 2015

    10 Park, S. J., "Synthesis of nylon 4 from gamma-aminobutyrate (GABA) produced by recombinant Escherichia coli" 36 : 885-892, 2013

    1 Beck, Z. Q., "Utilization of phosphoketolase in the production of mevalonate, isoprenoid precursors, and isoprene"

    2 Moon, T. S., "Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. coli" 12 : 298-305, 2010

    3 Miles, E. W., "The molecular basis of substrate channeling" 274 : 12193-12196, 1999

    4 Dwidar, M., "The future of butyric acid in industry" 2012 : 471417-, 2012

    5 Dinkel, H., "The eukaryotic linear motif resource ELM: 10 years and counting" 42 (42): D259-D266, 2014

    6 Bauer, H., "The dual role of zonula occludens (ZO)proteins" 2010 : 402593-, 2010

    7 Wang, Y., "Synthetic scaffolds increased resveratrol biosynthesis in engineered yeast cells" 157 : 258-260, 2012

    8 Dueber, J. E., "Synthetic protein scaffolds provide modular control over metabolic flux" 27 : 753-759, 2009

    9 Horn, A. H. C., "Synthetic protein scaffolds based on peptide motifs and cognate adaptor domains for improving metabolic productivity" 3 : 191-, 2015

    10 Park, S. J., "Synthesis of nylon 4 from gamma-aminobutyrate (GABA) produced by recombinant Escherichia coli" 36 : 885-892, 2013

    11 Abdul-Manan, N., "Structure of Cdc42 in complex with the GTPase-binding domain of the 'Wiskott-Aldrich syndrome' protein" 399 : 379-383, 1999

    12 Choi, K. -Y., "Ste5 tethers multiple protein kinases in the MAP kinase cascade required for mating in S. cerevisiae" 78 : 499-512, 1994

    13 Chen Yuan Hou ; 안치윤 ; 조병관 ; 강택진, "Selection of Escherichia coli Glutamate Decarboxylase Active at Neutral pH from a Focused Library" 한국생물공학회 23 (23): 473-479, 2018

    14 Mayer, B. J., "SH3 domains: complexity in moderation" 114 (114): 1253-1263, 2001

    15 Saksela, K., "SH3 domain ligand binding:what's the consensus and where's the specificity?" 586 : 2609-2614, 2012

    16 Pawson, T., "SH2 domains, interaction modules and cellular wiring" 11 : 504-511, 2001

    17 Koch, C. A., "SH2 and SH3 domains: elements that control interactions of cytoplasmic signaling proteins" 252 : 668-674, 1991

    18 Shieh, B. -H., "Regulation of the TRP Ca2+channel by INAD in Drosophila photoreceptors" 16 : 991-998, 1996

    19 Hulo, N., "Recent improvements to the PROSITE database" 32 (32): D134-D137, 2004

    20 오영훈 ; In Yong Eom ; 주정찬 ; 유주현 ; 송봉근 ; Seung Hwan Lee ; 홍순호 ; 박시재, "Recent advances in development of biomass pretreatment technologies used in biorefinery for the production of bio-based fuels, chemicals and polymers" 한국화학공학회 32 (32): 1945-1959, 2015

    21 Printen, J. A., "Protein-protein interactions in the yeast pheromone response pathway: Ste5p interacts with all members of the MAP kinase cascade" 138 : 609-619, 1994

    22 Huston, J. S., "Protein engineering of antibody binding sites: recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in Escherichia coli" 85 : 5879-5883, 1988

    23 Pham, V. D., "Production of gamma-aminobutyric acid from glucose by introduction of synthetic scaffolds between isocitrate dehydrogenase, glutamate synthase and glutamate decarboxylase in recombinant Escherichia coli" 207 : 52-57, 2015

    24 Tabata, K., "Process for producing mevalonic acid"

    25 Sampedro, M. N., "Postsynaptic density antigens: preparation and characterization of an antiserum against postsynaptic densities" 90 : 675-686, 1981

    26 Elion, E. A., "Pheromone response, mating and cell biology" 3 : 573-581, 2000

    27 Laskowski, R. A., "PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids" 33 (33): D266-D268, 2005

    28 Tam Dinh Le Vo ; Ji-seun Ko ; Seung Hwan Lee ; 박시재 ; 홍순호, "Overexpression of Neurospora crassa OR74A Glutamate Decarboxylase in Escherichia coli for Efficient GABA Production" 한국생물공학회 18 (18): 1062-1066, 2013

    29 Robinson, C. R., "Optimizing the stability of single-chain proteins by linker length and composition mutagenesis" 95 : 5929-5934, 1998

    30 Zarrinpar, A., "Optimization of specificity in a cellular protein interaction network by negative selection" 426 : 676-680, 2003

    31 Balla, S., "Minimotif Miner: a tool for investigating protein function" 3 : 175-177, 2006

    32 Napisa Pattharaprachayakul ; 최종일 ; Aran Incharoensakdi ; 우한민, "Metabolic Engineering and Synthetic Biology of Cyanobacteria for Carbon Capture and Utilization" 한국생물공학회 25 (25): 829-847, 2020

    33 Zhao, C., "Mechanisms and functional implications of adult neurogenesis" 132 : 645-660, 2008

    34 Harris, B. Z., "Mechanism and role of PDZ domains in signaling complex assembly" 114 (114): 3219-3231, 2001

    35 Gustin, M. C., "MAP kinase pathways in the yeast Saccharomyces cerevisiae" 62 : 1264-1300, 1998

    36 Agapakis, C. M., "Insulation of a synthetic hydrogen metabolism circuit in bacteria" 4 : 3-, 2010

    37 Trinh Thi Nguyen ; Nam Hoai Nguyen ; 김연희 ; 김중래 ; 박성훈, "In vivo Characterization of the Inducible Promoter System of 3-hydroxypropionic Dehydrogenase in Pseudomonas denitrificans" 한국생물공학회 26 (26): 612-620, 2021

    38 Reizman, I. M. B., "Improvement of glucaric acid production in E. coli via dynamic control of metabolic fluxes" 2 : 109-116, 2015

    39 Tamura, G., "Hiochic acid, a new growth factor for Lactobacillus homohiochi and Lactobacillus heterohiochi" 50 : 327-330, 2004

    40 Van Dung Pham ; Sivachandiran Somasundaram ; 이승환 ; 박시재 ; 홍순호, "Gamma-aminobutyric Acid Production through GABA Shunt by Synthetic Scaffolds Introduction in Recombinant Escherichia coli" 한국생물공학회 21 (21): 261-267, 2016

    41 Tremaroli, V., "Functional interactions between the gut microbiota and host metabolism" 489 : 242-249, 2012

    42 Conrado, R. J., "Engineering the spatial organization of metabolic enzymes: mimicking nature's synergy" 19 : 492-499, 2008

    43 방현배 ; 최인혁 ; 장준홍 ; 정기준, "Engineering of Escherichia coli for the Economic Production L-phenylalanine in Large-scale Bioreactor" 한국생물공학회 26 (26): 468-475, 2021

    44 Martin, V. J. J., "Engineering a mevalonate pathway in Escherichia coli for production of terpenoids" 21 : 796-802, 2003

    45 Irisappan Ganesh ; Tae-Wan Kim ; Jeong-Geol Na ; 엄경태 ; Soon Ho Hong, "Engineering Escherichia coli to Sense Non-native Environmental Stimuli: Synthetic Chimera Two-component Systems" 한국생물공학회 24 (24): 12-22, 2019

    46 Tran, K. -N. T., "Efficient Itaconic acid production via protein-protein scaffold introduction between GltA, AcnA, and CadA in recombinant Escherichia coli" 35 : e2799-, 2019

    47 Dougherty, M. J., "Directed evolution:new parts and optimized function" 20 : 486-491, 2009

    48 Bai, J., "Confidence intervals for diffusion index forecasts and inference for factor-augmented regressions" 74 : 1133-1150, 2006

    49 Pfleger, B. F., "Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes" 24 : 1027-1032, 2006

    50 전숭종 ; 김연희 ; 남수완 ; 김세희 ; Bo-Hye Shin, "Cloning and Expression of a Full-Length Glutamate Decarboxylase Gene from Lactobacillus brevis BH2" 한국생물공학회 12 (12): 707-712, 2007

    51 Zhang, F., "Changes of high mobility group box 1 in serum of pig acute hepatic failure model and significance" 28 : 52-55, 2008

    52 Baek, J. M., "Butyrate production in engineered Escherichia coli with synthetic scaffolds" 110 : 2790-2794, 2013

    53 Salis, H. M., "Automated design of synthetic ribosome binding sites to control protein expression" 27 : 946-950, 2009

    54 Kim, A. S., "Autoinhibition and activation mechanisms of the Wiskott-Aldrich syndrome protein" 404 : 151-158, 2000

    55 Jebamani Petrina ; SOKALINGAM SRIRAM ; SRIRAMULU DINESH KUMAR ; 정상택 ; 이선구, "Assessment of Computational Modeling of Fc-Fc Receptor Binding Through Protein-protein Docking Tool" 한국생물공학회 25 (25): 734-741, 2020

    56 Pawson, T., "Assembly of cell regulatory systems through protein interaction domains" 300 : 445-452, 2003

    57 Argos, P., "An investigation of oligopeptides linking domains in protein tertiary structures and possible candidates for general gene fusion" 211 : 943-958, 1990

    58 George, R. A., "An analysis of protein domain linkers: their classification and role in protein folding" 15 : 871-879, 2002

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