Species diversity and distribution of the genus Colpomenia (Scytosiphonaceae, Phaeophyceae) along the coast of China

다국어 초록 (Multilingual Abstract)

The marine brown algal genus Colpomenia has a worldwide distribution, with five species reported in Korea and Japan. However, no studies to date attempted to identify the number of species and geographical distribution of Colpomenia along Chinese coast. To fill the biodiversity knowledge gap, we analyzed 63 mitochondrial cox3 and 62 mitochondrial atp6 sequences of Colpomenia specimens collected from 30 localities along the Chinese coast. Maximum likelihood and Bayesian inference trees suggest the presence of at least three Colpomenia species (i.e., C. peregrina, C. claytoniae, and C. sinuosa) in China. C. peregrina and C. claytoniae are documented for the first time. C. sinuosa was only found in the South China Sea and its distribution didn’t overlap with that of C. peregrina which was found in the Yellow-Bohai Sea and the East China Sea. C. claytoniae appears to be confined to three isolated islands in the East and the South China Sea, where it occurs in sympatry with, respectively, C. peregrina and C. sinuosa. Future study can focus on comparing ecophysiological differences of Colpomenia species in response to environmental variables and exploring possible genetic hybridization / introgression at inter-specific contact zones.

참고문헌 (Reference)

1 Darriba, D., "jModelTest 2: more models, new heuristics and parallel computing" 9 : 772-, 2012

2 van den Hoek, C., "World-wide latitudinal and longitudinal seaweed distribution patterns and their possible causes, as illustrated by the distribution of Rhodophytan genera" 38 : 227-257, 1984

3 Perestenko, L. P., "Vodorosli Zaliva Petra Velikogo [The seaweeds of Peter the Great Bay]" “NAUKA” Leningradskoe Otdelenie 232-, 1980

4 Vandermeulen, H., "The taxonomy and autecology of Colpomenia peregrina (Sauv.) Hamel (Phaeophyceae)" The University of British Columbia 1984

5 Xie, C., "The paleogeographic configuration of China Seas and its climate influence during the last glacial maximum" 16 : 129-, 1996

6 Blackler, H., "The ocurrence of Colpomenia peregrina (Sauv.) Hamel in the Mediterranean (Phaeophyta: Scytosiphonales)" 15 : 5-8, 1967

7 Barkley, R. A., "The Kuroshio current" 6 : 54-60, 1970

8 Cock, J. M., "The Ectocarpus genome and the independent evolution of multicellularity in brown algae" 465 : 617-621, 2010

9 Aisha, K., "Taxonomy of the genus Colpomenia (Laminarophyceae, Phaeophycota) from the coast of Karachi" 49 : 123-129, 2012

10 Santiañez, W. J. E., "Taxonomic reassessment of the Indo-Pacific Scytosiphonaceae (Phaeophyceae): Hydroclathrus rapanuii sp. nov. and Chnoospora minima from Easter Island, with proposal of Dactylosiphon gen. nov. and Pseudochnoospora gen. nov" 61 : 47-64, 2018

11 Sauvageau, C., "Sur le Colpomenia sinuosa Derb. et Sol" 24 : 309-353, 1927

12 Cho, G. Y., "Sequence repeats enlarge the internal transcribed spacer 1 region of the brown alga Colpomenia sinuosa (Scytosiphonaceae, Phaeophyceae)" 57 : 242-250, 2009

13 Tseng, C. K., "Seaweeds in Yellow Sea and Bohai Sea of China" Science Press 453-, 2008

14 Guo, X., "Sea level changes since late Pleistocene in China" 4 : 330-341, 1979

15 Wang, P., "Response of western Pacific marginal seas to glacial cycles: paleoceanographic and sedimentological features" 156 : 5-39, 1999

16 Zheng, J., "Recent progress of climate change research in physical geography studies from China" 37 : 16-27, 2018

17 Stamatakis, A., "RAxML version 8 : a tool for phylogenetic analysis and post-analysis of large phylogenies" 30 : 1312-1313, 2014

18 Hu, Z. -M., "Phylogeographic structure and deep lineage diversification of the red alga Chondrus ocellatus Holmes in the Northwest Pacific" 24 : 5020-5033, 2015

19 Kogame, K., "Phylogeny of the order Scytosiphonales(Phaeophyceae)based on DNA sequences of rbcL, partial rbcS, and partial LSU nrDNA" 38 : 496-502, 1999

20 Hamel, G, "Phaeophyceae de France. Fasc. III" Wolf 177-240, 1937

21 Li, T., "Paleoceanography in the Okinawa Trough" Ocean Press 259-, 2009

22 Liu, J, "Paleoceanographic characteristics during the LGM period in the west Pacific marginal seas" 19 : 14-16, 1995

23 Tseng, C. K., "On the regional division of the marine algal flora of the western north Pacific" 2 : 244-267, 1959

24 Li, J. -J., "Oceanic currents drove population genetic connectivity of the brown alga Sargassum thunbergii in the north-west Pacific" 44 : 230-242, 2017

25 Okamura, K., "Nippon kaisô shi [Descriptions of Japanese algae]" Uchida Rokakuho 964-, 1936

26 Nelson, W. A., "New Zealand seaweeds: an illustrated guide" Papa Press 328-, 2013

27 Harper, M. A., "New Zealand Inventory of Biodiversity. Vol. 3. Kingdoms Bacteria, Protozoa, Chromista, Plantae, Fungi" Canterbury University Press 114-163, 2012

28 Ronquist, F., "MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space" 61 : 539-542, 2012

29 Scott, F. J., "Marine plants of Tasmania. Tasmania Herbarium" Tasmanian Museum and Art Gallery 360-, 2017

30 Boo, S. M., "Marine plants from Korea" Marine & Extreme Genome Research Centre Program 233-, 2012

31 Lee, Y. P., "Marine algae of Jeju" Academy Publication 477-, 2008

32 Kumar, S., "MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets" 33 : 1870-1874, 2016

33 Lin, S. -M., "Long-term study on seasonal changes in floristic composition and structure of marine macroalgal communities along the coast of Northern Taiwan, southern East China Sea" 165 : 83-, 2018

34 Kogame, K., "Life history of Colpomenia sinuosa and Hydroclathrus clathratus (Scytosiphonales, Phaeophyceae)in culture" 45 : 277-231, 1997

35 Schaffelke, B., "Introduced macroalgae - a growing concern" 18 : 529-541, 2006

36 Müller, R., "Impact of oceanic warming on the distribution of seaweeds in polar and cold-temperature waters" 52 : 617-638, 2009

37 Hu, Z. -M., "Hidden diversity and phylogeographic history provide conservation insights for the edible seaweed Sargassum fusiforme in the Northwest Pacific" 10 : 366-378, 2017

38 Tittensor, D. P., "Global patterns and predictions of marine biodiversity across taxa" 466 : 1098-1101, 2010

39 Keith, S. A., "Global diversity of marine macroalgae: environmental conditions explain less variation in the tropics" 23 : 517-529, 2014

40 Cho, G. Y., "Genealogical partitioning and phylogeography of Colpomenia peregrina(Scytosiphonaceae, Phaeophyceae), based on plastid rbcL and nuclear ribosomal DNA internal transcribed spacer sequences" 44 : 103-111, 2005

41 Longhurst, A., "Ecological geography of the sea" Elsevier Academic Press 560-, 2007

42 Librado, P., "DnaSP v5 : a software for comprehensive analysis of DNA polymorphism data" 25 : 1451-1452, 2009

43 Lee, K. M., "Distribution patterns and introduction pathways of the cosmopolitan brown alga Colpomenia peregrina using mt cox3 and atp6 sequences" 26 : 491-504, 2014

44 Lee, K. M., "Cryptic diversity and biogeography of the widespread brown alga Colpomenia sinuosa (Ectocarpales, Phaeophyceae)" 56 : 15-25, 2013

45 Liu, F., "Complete mitochondrial genome of the brown alga Colpomenia peregrina (Scytosiphonaceae, Phaeophyceae): genome characterization and comparative analyses. Mitochondrial DNA A DNA Mapp" 27 : 1601-1603, 2016

46 Tseng, C. K., "Common seaweeds of China" Science Press 316-, 1983

47 Lee, K. M., "Colpomenia wynnei sp. nov. (Scytosiphonaceae, Phaeophyceae): a new species of marine algae from northeast Asia" 53 : 480-487, 2014

48 Lee, K. M., "Colpomenia durvillei (Scytosiphonaceae, Phaeophyceae):its distribution and relationships with other elongate species of the genus" 55 : 367-375, 2012

49 Boo, S. M., "Colpomenia claytonii sp. nov. (Scytosiphonaceae, Phaeophyceae)based on morphology and mitochondrial cox3sequences" 54 : 159-167, 2011

50 Liu, R., "Checklist of marine biota of China seas" Science Press 1267-, 2008

51 Yoshida, T., "Checklist of marine algae of Japan (revised in 2015)" 63 : 129-189, 2015

52 Ma, C. -L., "Characteristics of atmospheric environment in China’s coastal areas and atmospheric corrosion in typical coastal regions" 14 : 65-69, 2017

53 Tyberghein, L., "Bio-ORACLE: a global environmental dataset for marine species distribution modelling" 21 : 272-281, 2012

54 Hu, Z. -M., "Asymmetric genetic exchange in the brown seaweed Sargassum fusiforme (Phaeophyceae) driven by oceanic currents" 160 : 1407-1414, 2013

55 Boo, S. M., "Algal Flora of Korea. Vol. 2, No. 1. Heterokontophyta: Phaeophyceae: Ectocarpales. Marine Brown Algae 1" National Institute of Biological Resources 155-185, 2010

56 Guiry, M. D., "AlgaeBase. World-wide electronic publication" National University of Ireland

57 Clayton, M. N., "A study of variation in Australian species of Colpomenia(Phaeophyta, Scytosiphonales)" 14 : 187-195, 1975

58 Guindon, S., "A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood" 52 : 696-704, 2003

59 Tseng, C. K., "A preliminary analytical study of the Chinese marine algal flora" 5 : 245-253, 1963

60 Lee, Y., "A catalogue of the seaweeds in Korea" Cheju National University Press 662-, 2001