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    KCI등재후보 SCOPUS SCIE

    An universal biolinker for immobilization of protein and oligoDNA on a glass slide chip

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    https://www.riss.kr/link?id=A105874801

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    다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

    We have previously shown that a Calixarene derivative was an excellent agent for protein immobilization on a solid phase. We further characterized the recognition mechanism between the ‘host’ Calixarene derivative and ‘guest’ molecules in this study. The rate of complex formation of Calixcrown with amino acids informed that Calixcrown had the strongest interaction with Arg among the tested amino acids. In order to confirm that Arg is an effective residue in immobilization of protein on Calixcrown-coated glass, several human recombinant superoxide dismutase tagged with different numbers of Arg or Lys were generated. The recombinant protein tagged with longer Arg was immobilized better than the ones tagged with shorter Arg or Lys. We also tested if Calixcrown can immobilize oligoDNA as efficiently as it does protein. Calixcrown most strongly captured homo-dGTP oligoDNA among the four homo-oligoDNAs. When Calixcrown chip was applied to detect single nucleotide polymorphism, it differentiated one base pair mismatch of the double helix oligoDNA. Thus, Calixarene derivative linker molecule can be used as an efficient immobilization agent for both protein and oligoDNA with the right orientation on a solid phase.
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    We have previously shown that a Calixarene derivative was an excellent agent for protein immobilization on a solid phase. We further characterized the recognition mechanism between the ‘host’ Calixarene derivative and ‘guest’ molecules in this...

    We have previously shown that a Calixarene derivative was an excellent agent for protein immobilization on a solid phase. We further characterized the recognition mechanism between the ‘host’ Calixarene derivative and ‘guest’ molecules in this study. The rate of complex formation of Calixcrown with amino acids informed that Calixcrown had the strongest interaction with Arg among the tested amino acids. In order to confirm that Arg is an effective residue in immobilization of protein on Calixcrown-coated glass, several human recombinant superoxide dismutase tagged with different numbers of Arg or Lys were generated. The recombinant protein tagged with longer Arg was immobilized better than the ones tagged with shorter Arg or Lys. We also tested if Calixcrown can immobilize oligoDNA as efficiently as it does protein. Calixcrown most strongly captured homo-dGTP oligoDNA among the four homo-oligoDNAs. When Calixcrown chip was applied to detect single nucleotide polymorphism, it differentiated one base pair mismatch of the double helix oligoDNA. Thus, Calixarene derivative linker molecule can be used as an efficient immobilization agent for both protein and oligoDNA with the right orientation on a solid phase.

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    참고문헌 (Reference)

    1 Perreault, D.M., "Using guanidinium groups for the recognition of RNA and as catalysts for the hydrolysis of RNA" 5 : 1209-1220, 1997

    2 김태선, "ProteoChip: A highly sensitive protein microarray prepared by a novel method of protein, immobilization for application of protein-protein interaction studies" WILEY-V C H VERLAG GMBH 3 (3): 2289-2304, 200312

    3 Lueking, A., "Protein microarrays for gene expression and antibody screening" 270 : 103-111, 1999

    4 Sasakura, Y., "Protein microarray system for detecting protein-protein interactions using an anti-Histag antibody and fluorescence scanning: effects of the heme redox state on protein-protein interactions of heme-regulated phosphodiesterase from Escherichia coli" 76 : 6521-6527, 2004

    5 MacBeath, G., "Printing proteins as microarrays for high-throughput function determination" 289 : 1760-1763, 2000

    6 Turkova, J., "Oriented immobilization of biologically active proteins as a tool for revealing protein interac-8 tions and function" 722 : 11-31, 1999

    7 Schug, K.A., "Noncovalent binding between guanidinium and anionic groups: focus on biological-and synthetic-based arginine/guanidinium interactions with phosphonate and sulfonate residues" 105 : 67-114, 2005

    8 Stone, M.M., "Non-covalent calixarene-amino acid complexes formed by MALDI-MS" 13 : 964-974, 2002

    9 Blohm, D.H., "New developments in microarray technology" 12 : 41-47, 2001

    10 Miyamoto, S., "Molecular dynamics studies of calixspherand complexes with alkali metal cations: calculation of the absolute and relative free energies of binding of cations to a calixspherand" 114 : 3668-3674, 1992

    1 Perreault, D.M., "Using guanidinium groups for the recognition of RNA and as catalysts for the hydrolysis of RNA" 5 : 1209-1220, 1997

    2 김태선, "ProteoChip: A highly sensitive protein microarray prepared by a novel method of protein, immobilization for application of protein-protein interaction studies" WILEY-V C H VERLAG GMBH 3 (3): 2289-2304, 200312

    3 Lueking, A., "Protein microarrays for gene expression and antibody screening" 270 : 103-111, 1999

    4 Sasakura, Y., "Protein microarray system for detecting protein-protein interactions using an anti-Histag antibody and fluorescence scanning: effects of the heme redox state on protein-protein interactions of heme-regulated phosphodiesterase from Escherichia coli" 76 : 6521-6527, 2004

    5 MacBeath, G., "Printing proteins as microarrays for high-throughput function determination" 289 : 1760-1763, 2000

    6 Turkova, J., "Oriented immobilization of biologically active proteins as a tool for revealing protein interac-8 tions and function" 722 : 11-31, 1999

    7 Schug, K.A., "Noncovalent binding between guanidinium and anionic groups: focus on biological-and synthetic-based arginine/guanidinium interactions with phosphonate and sulfonate residues" 105 : 67-114, 2005

    8 Stone, M.M., "Non-covalent calixarene-amino acid complexes formed by MALDI-MS" 13 : 964-974, 2002

    9 Blohm, D.H., "New developments in microarray technology" 12 : 41-47, 2001

    10 Miyamoto, S., "Molecular dynamics studies of calixspherand complexes with alkali metal cations: calculation of the absolute and relative free energies of binding of cations to a calixspherand" 114 : 3668-3674, 1992

    11 Hiller, R., "Microarrayed allergen molecules: disgnostic gatekeepers for allergy treatment" 16 : 414-416, 2002

    12 Cheng, Y., "Measurement of chiral complexes of cyclodextrins and amino acids by electrospray ionization time-of-flight mass spectrometry" 36 : 834-836, 2001

    13 Høyer-Hansen, G., "Loss of ELISA specificity due to biotinylation of monoclonal antibodies" 235 : 91-99, 2000

    14 Busse, P.J., "Identification of sequential IgE-binding epitopes on bovine alpha (s2)-casein in cow’s milk allergic patients" 129 : 93-96, 2002

    15 Nakagawa, T., "Fabrication of amino silane-coated microchip for DNA extraction from whole blood" 116 : 105-111, 2005

    16 Isaksson, A., "Discovery, scoring and utilization of human single nucleotide polymorphisms: a multidisciplinary problem" 8 : 154-156, 2000

    17 Philip, T., "Confirmation of the assignment of human SOD gene to chromosome 21q22" 22 : 521-523, 1978

    18 Kudo, Y., "Colorimetric chiral recognition by a molecular sensor" 382 : 522-524, 1996

    19 Mandolini, L., "Calixarenes in action" Imperial College press 2000

    20 김태선, "Calixarene derivative as a tool for highly sensitive detection and oriented immobilization of proteins in a microarray format through noncovalent molecular interaction" FEDERATION AMER SOC EXP BIOL 19 : 1335-+, 200506

    21 Jain, K.K., "Applications of nanobiotechnology in clinical diagnostics" 53 : 2002-2009, 2007

    22 Anderson, K.S., "Application of protein microarrays for multiplexed detection of antibodies to tumor antigens in breast cancer" 7 : 1490-1499, 2008

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    연월일 이력구분 이력상세 등재구분
    학술지등록 한글명 : BioChip Journal
    외국어명 : BioChip Journal
    2023 평가 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
    2020-01-01 등재 등재학술지 유지 (해외등재 학술지 평가) KCI등재
    2013-10-01 등재 등재학술지 선정 (기타) KCI등재
    2011-01-01 등재 등재후보 1차 PASS (등재후보1차) KCI등재후보
    2009-01-01 등재 SCIE 등재 (신규평가) KCI등재후보
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    학술지 인용정보
    기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
    2016 1.33 0.25 0.88
    KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
    0.66 0.53 0.255 0.1
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