<P>Many applications, such as protein design, homology modeling, flexible docking, etc. require the prediction of a protein's optimal side-chain conformations from just its amino acid sequence and backbone structure. Side-chain prediction (SCP) ...
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https://www.riss.kr/link?id=A107486676
2016
-
SCI,SCIE,SCOPUS
학술저널
416-423(8쪽)
0
상세조회0
다운로드다국어 초록 (Multilingual Abstract)
<P>Many applications, such as protein design, homology modeling, flexible docking, etc. require the prediction of a protein's optimal side-chain conformations from just its amino acid sequence and backbone structure. Side-chain prediction (SCP) ...
<P>Many applications, such as protein design, homology modeling, flexible docking, etc. require the prediction of a protein's optimal side-chain conformations from just its amino acid sequence and backbone structure. Side-chain prediction (SCP) is an NP-hard energy minimization problem. Here, we present BetaSCPWeb which efficiently computes a conformation close to optimal using a geometry-prioritization method based on the Voronoi diagram of spherical atoms. Its outputs are visual, textual and PDB file format. The web server is free and open to all users at http://voronoi.hanyang.ac.kr/betascpweb with no login requirement.</P>
Synteny Portal: a web-based application portal for synteny block analysis
Galaxy7TM: flexible GPCR–ligand docking by structure refinement