1 Zhang C, "tasiRNAdb: a database of ta-siRNA regulatory pathways" 30 (30): 1045-1046, 2014
2 Bentley DR, "Whole-genome re-sequencing" 16 : 545-552, 2006
3 Hsieh LC, "Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing" 151 : 2120-2132, 2009
4 Gambino G, "Transgene silencing in grapevines transformed with GFLV resistance genes: analysis of variable expression of transgene, siRNAs production and cytosine methylation" 19 (19): 17-27, 2010
5 Rock CD, "Trans-acting small interfering RNA4: key to nutraceutical synthesis in grape development" 18 (18): 601-610, 2013
6 Takeda A, "The mechanism selecting the guide strand from small RNA duplexes is different among Argonaute proteins" 49 : 493-500, 2008
7 Bogs J, "The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development" 143 : 1347-1361, 2007
8 Czemmel S, "The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries" 151 : 1513-1530, 2009
9 Harris MA, "The gene ontology (GO) database and informatics resource" 32 (32): D258-D261, 2004
10 Zhang X, "The epigenetic landscape of plants" 320 : 489-492, 2008
1 Zhang C, "tasiRNAdb: a database of ta-siRNA regulatory pathways" 30 (30): 1045-1046, 2014
2 Bentley DR, "Whole-genome re-sequencing" 16 : 545-552, 2006
3 Hsieh LC, "Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing" 151 : 2120-2132, 2009
4 Gambino G, "Transgene silencing in grapevines transformed with GFLV resistance genes: analysis of variable expression of transgene, siRNAs production and cytosine methylation" 19 (19): 17-27, 2010
5 Rock CD, "Trans-acting small interfering RNA4: key to nutraceutical synthesis in grape development" 18 (18): 601-610, 2013
6 Takeda A, "The mechanism selecting the guide strand from small RNA duplexes is different among Argonaute proteins" 49 : 493-500, 2008
7 Bogs J, "The grapevine transcription factor VvMYBPA1 regulates proanthocyanidin synthesis during fruit development" 143 : 1347-1361, 2007
8 Czemmel S, "The grapevine R2R3-MYB transcription factor VvMYBF1 regulates flavonol synthesis in developing grape berries" 151 : 1513-1530, 2009
9 Harris MA, "The gene ontology (GO) database and informatics resource" 32 (32): D258-D261, 2004
10 Zhang X, "The epigenetic landscape of plants" 320 : 489-492, 2008
11 Montgomery TA, "Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation" 133 (133): 128-141, 2008
12 Mi S, "Sorting of small RNAs into Arabidopsis Argonaute complexes is directed by the 5′ terminal nucleotide" 133 : 116-127, 2008
13 Sunkar R, "Small RNAs as big players in plant abiotic stress responses and nutrient deprivation" 12 (12): 301-309, 2007
14 Tedder P, "Small RNA analysis in Petunia hybrida identifies unusual tissue-specific expression patterns of conserved miRNAs and of a 24mer RNA" 15 : 1012-1020, 2009
15 Katiyar-Agarwal S, "Role of small RNAs in host-microbe interactions" 48 : 225-246, 2010
16 Wu L, "Rice micro-RNA effector complexes and targets" 21 : 3421-3435, 2009
17 Fahlgren N, "Regulation of AUXINRESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis" 16 : 939-944, 2006
18 Ron M, "Proper regulation of a sperm-specific cis-nat-siRNA is essential for double fertilization in Arabidopsis" 24 (24): 1010-1021, 2010
19 Carthew RW, "Origins and mechanisms of miRNAs and siRNAs" 136 : 642-655, 2009
20 Voinnet O, "Origin, biogenesis, and activity of plant microRNAs" 136 (136): 669-687, 2009
21 Bartel DP, "MicroRNAs: genomics, biogenesis, mechanism, and function" 116 (116): 281-297, 2004
22 Sunkar R, "MicroRNAs with macro-effects on plant stress responses" 21 (21): 805-811, 2010
23 Jones-Rhoades MW, "MicroRNAs and their regulatory roles in plants" 57 : 19-53, 2006
24 Allen E, "MicroRNAdirected phasing during trans-acting siRNA biogenesis in plants" 121 : 207-221, 2005
25 Ronemus M, "MicroRNA-targeted and small interfering RNA-mediated mRNA degradation is regulated by Argonaute, Dicer, and RNA-dependent RNA polymerase in Arabidopsis" 18 : 1559-1574, 2006
26 Kanehisa M, "KEGG: kyoto encyclopedia of genes and genomes" 28 : 27-30, 2000
27 Zhang C, "Identification of trans-acting siRNAs and their regulatory cascades in grapevine" 28 (28): 2561-2568, 2012
28 Wang C, "Identification of microRNAs from Amur grape (Vitis amurensis Rupr.) by deep sequencing and analysis of microRNA variations with bioinformatics" 13 (13): 122-, 2012
29 Xu MY, "Identification of miRNAs and their targets from Brassica napus by high-throughput sequencing and degradome analysis" 13 : 421-, 2012
30 Pantaleo V, "Identification of grapevine microRNAs and their targets using high throughput sequencing and degradome analysis" 62 : 960-976, 2010
31 Wan L, "Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing" 12 : 146-, 2012
32 Sunkar R, "Identification and characterization of endogenous small interfering RNAs from rice" 33 (33): 4443-4454, 2005
33 Somvanshi P, "High throughput prediction and analysis of small interfering RNA from the 5′UTR and capsid genes of flavivirus through in silico strategies" 1 (1): 298-302, 2009
34 Kasschau KD, "Genome-wide profiling and analysis of Arabidopsis siRNAs" 5 (5): e57-, 2007
35 Miozzi L, "Genome-wide identification of viral and host transcripts targeted by viral siRNAs in Vitis vinifera" 14 (14): 30-43, 2013
36 Howell MD, "Genome-wide analysis of the RNA-DEPENDENT RNA POLYMERASE6/DICERLIKE4 pathway in Arabidopsis reveals dependency on miRNAand tasiRNA-directed targeting" 19 : 926-942, 2007
37 Pang M, "Genome wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)" 10 : R122-, 2009
38 Lu C, "Elucidation of the small RNA component of the transcriptome" 309 : 1567-1569, 2005
39 Cutanda-Perez MC, "Ectopic expression of VlmybA1 in grapevine activates a narrow set of genes involved in anthocyanin synthesis and transport" 69 : 633-648, 2009
40 Zhang J, "Dynamic expression of small RNA populations in larch (Larix leptolepis)" 237 (237): 89-101, 2013
41 Hoen PA, "Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms" 36 : e141-, 2008
42 Moxon S, "Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening" 18 : 1602-1609, 2008
43 Li D, "Deep sequencing of maize small RNAs reveals a diverse set of MicroRNA in dry and imbibed seeds" 8 (8): e55107-, 2013
44 Wang C, "Deep sequencing of grapevine flower and berry short RNA library for discovery of new microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase" 143 : 64-81, 2011
45 Song CN, "Deep sequencing discovery of new and conserved microRNAs in trifoliate orange (Citrus trifoliate)" 11 : 431-, 2010
46 Xie Z, "DICER-LIKE4 functions intrans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana" 102 : 12984-12989, 2005
47 Mica E, "Correction: high throughput approaches reveal splicing of primarymicroRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera" 11 : 109-, 2010
48 Qiu CX, "Computational identification of microRNAs and their targets in Gossypium hirsutum expressed sequence tags" 395 : 49-61, 2007
49 Morin RD, "Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa" 18 (18): 571-584, 2008
50 Carra A, "Cloning and characterization of small non-coding RNAs from grapevine" 59 : 750-763, 2009
51 Jagadeeswaran G, "Characterization of the small RNA component of leaves and fruits from four different cucurbit species" 13 (13): 329-, 2012
52 Chen HM, "Bioinformatic prediction and experimental validation of a microRNA-directed tandem transacting siRNA cascade in Arabidopsis" 104 : 3318-3323, 2007
53 Luo QJ, "An autoregulatory feedback loop involving PAP1 and TAS4in response to sugars in Arabidopsis" 80 : 117-129, 2012
54 Yoshikawa M, "A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis" 19 : 2164-2175, 2005
55 Katiyar-Agarwal S, "A pathogen-inducible endogenous siRNA in plant immunity" 103 : 18002-18007, 2006
56 Rajagopalan R, "A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana" 20 : 3407-3425, 2006
57 Williams L, "A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes" 102 : 9703-9708, 2005