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      KCI등재 SCOPUS SCIE

      Characterization and fine mapping of osh15(t), a novel dwarf mutant gene in rice (Oryza sativa L.)

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      https://www.riss.kr/link?id=A104430784

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      다국어 초록 (Multilingual Abstract)

      Plant height is one of the most important agronomic traits of plant architecture, and also affects grain yield in rice. In this study, we obtained a novel dwarf rice mutant of japonica variety Shennong9816, designated Shennong9816d. Compared with wil...

      Plant height is one of the most important agronomic traits of plant architecture, and also affects grain yield in rice. In this study, we obtained a novel dwarf rice mutant of japonica variety Shennong9816, designated Shennong9816d.
      Compared with wild-type, the Shennong9816d plant height was significantly reduced, and the tiller number significantly increased. Additionally, the mutant yield component, and the number of large and small vascular bundles were significantly decreased compared with wildtype.
      Genetic analysis indicated that the Shennong9816d dwarf phenotype was controlled by a recessive nuclear gene, while the plant was shown to be sensitive to gibberellic acid.
      Using a large F2 population derived from a cross between Shennong9816d and the indica rice variety Habataki, the osh15(t) gene was fine mapped between RM20891 and RM20898, within a physical distance of 73.78 kb.
      Sequencing analysis showed that Shennong9816d carries a 1 bp mutation and a 30 bp insertion in the OSH15 region.
      These results suggest that osh15(t) is a novel allelic mutant originally derived from japonica variety Shennong9816, which may be useful for introducing the semi-dwarf phenotype to improve plant architecture in rice breeding practice.

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      참고문헌 (Reference)

      1 Zhang QF, "Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice" 91 : 8675-8679, 1994

      2 Shimada A, "The rice SPINDLY gene functions as a negative regulator of gibberellin signaling by controlling the suppressive function of the DELLA protein, SLR1, and modulating brassinosteroid synthesis" 48 : 390-402, 2006

      3 Ishikawa S, "Suppression of tiller bud activity in tillering dwarf mutants of rice" 46 : 79-86, 2005

      4 Yang XM, "Semidwarf gene sd-k has pleiotropic effects on rice (Oryza sativa L.) plant architecture" 133 : 335-340, 2014

      5 Ueguchi-Tanaka M, "Rice dwarf mutant d1, which is defective in the alpha subunit of the heterotrimeric G protein, affects gibberellin signal transduction" 97 : 11638-11643, 2000

      6 Zhao M, "Regulation of OsmiR156h through alternative polyadenylation improves grain yield in rice" 10 : e0126154-, 2015

      7 Wang L, "OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice" 57 : 498-510, 2009

      8 Lander ES, "MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations" 1 : 174-181, 1987

      9 Hong Z, "Loss-offunction of a rice brassinosteroid biosynthetic enzyme, C-6 oxidase, prevents the organized arrangement and polar elongation of cells in the leaves and stem" 32 : 495-508, 2002

      10 Yamamuro C, "Loss of function of a rice brassinosteriod insensitive 1 homolog prevents internode elongation and bending of the lamina joint" 12 : 1591-1605, 2000

      1 Zhang QF, "Using bulked extremes and recessive class to map genes for photoperiod-sensitive genic male sterility in rice" 91 : 8675-8679, 1994

      2 Shimada A, "The rice SPINDLY gene functions as a negative regulator of gibberellin signaling by controlling the suppressive function of the DELLA protein, SLR1, and modulating brassinosteroid synthesis" 48 : 390-402, 2006

      3 Ishikawa S, "Suppression of tiller bud activity in tillering dwarf mutants of rice" 46 : 79-86, 2005

      4 Yang XM, "Semidwarf gene sd-k has pleiotropic effects on rice (Oryza sativa L.) plant architecture" 133 : 335-340, 2014

      5 Ueguchi-Tanaka M, "Rice dwarf mutant d1, which is defective in the alpha subunit of the heterotrimeric G protein, affects gibberellin signal transduction" 97 : 11638-11643, 2000

      6 Zhao M, "Regulation of OsmiR156h through alternative polyadenylation improves grain yield in rice" 10 : e0126154-, 2015

      7 Wang L, "OsGSR1 is involved in crosstalk between gibberellins and brassinosteroids in rice" 57 : 498-510, 2009

      8 Lander ES, "MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations" 1 : 174-181, 1987

      9 Hong Z, "Loss-offunction of a rice brassinosteroid biosynthetic enzyme, C-6 oxidase, prevents the organized arrangement and polar elongation of cells in the leaves and stem" 32 : 495-508, 2002

      10 Yamamuro C, "Loss of function of a rice brassinosteriod insensitive 1 homolog prevents internode elongation and bending of the lamina joint" 12 : 1591-1605, 2000

      11 Jiang L, "Li JY(2013)DWARF53 acts as a repressor of strigolactone signalling in rice" 504 : 401-405, 2013

      12 Asano K, "Isolation and characterization of dominant dwarf mutants, Slr1-d, in rice" 281 : 223-231, 2009

      13 Marri PR, "Identification and mapping of yield and yield related QTLs from an Indian accession of Oryza rufipogon" 6 : 1-14, 2005

      14 Yuan Y, "Identification and fine mapping of qPH6, a novel major uantitative trait locus for plant height in rice" 35 : 56-, 2015

      15 Wang L, "Heterotrimeric G protein a subunit is involved in rice brassinosteroid response" 16 : 916-922, 2006

      16 Asano K, "Genetic and molecular analysis of utility of sd1 alleles in rice breeding" 57 : 53-58, 2007

      17 Liang F, "Genetic analysis and fine mapping of a novel semidominant dwarfing gene LB4D in rice" 53 : 312-323, 2011

      18 Nagasaki H, "Functional analysis of the conserved domains of a rice KNOX homeodomain protein, OSH15" 13 : 2085-2098, 2001

      19 Gao ZY, "Dwarf 88, a novel putative esterase gene affecting architecture of rice plant" 71 : 265-276, 2009

      20 Chen X, "Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.)" 95 : 553-567, 1997

      21 Arite T, "DWARF10, an RMS1/MAX4/ DAD1 ortholog, controls lateral bud outgrowth in rice" 51 : 1019-1029, 2007

      22 Ding ZQ, "DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.)" 457 : 133-140, 2015

      23 Zhou F, "D14–SCFD3-dependent degradation of D53 regulates strigolactone signaling" 504 : 406-410, 2013

      24 Liu BM, "Characterizations and molecular mapping of a novel dominant semi-dwarf gene Sdd(t) in rice (Oryza sativa L)" 127 : 125-130, 2008

      25 Md. Babul Akter, "Characterization and mapping of d13, a dwarfing mutant gene, in rice" 한국유전학회 37 (37): 893-903, 2015

      26 Li RQ, "Characterization and genetic mapping of a photoperiod-sensitive dwarf 1 locus in rice (Oryza sativa L.)" 127 : 241-250, 2014

      27 Tong HN, "Brassinosteroid regulates cell elongation by modulating gibberellin metabolism in rice" 26 : 4376-4393, 2014

      28 Sakamoto T, "Auxin signal transcription factor regulates expression of the brassinosteroid receptor gene in rice" 73 : 676-688, 2013

      29 Itoh H, "A rice semi-dwarf gene, Tan- Ginbozu (D35), encodes the gibberellin biosynthesis enzyme, ent-kaurene oxidase" 54 : 533-547, 2004

      30 Hung Z, "A rice brassinosteroid- deficient mutant, ebisu dwarf (d2), is caused by a loss of function of a new member of cytoehrome P450" 15 : 2900-2910, 2003

      31 Tanabe S, "A novel cytochrome P450 is implicated in brassinosteroid biosynthesis via the characterization of a rice dwarf mutant, dwarf11, with reduced seed length" 17 : 776-790, 2005

      32 Sui JM, "A new GA-insensitive semi-dwarf mutant of rice (Oryza sativa L.) with a missense mutation in the SDG gene 3" 30 : 187-194, 2012

      33 Sasaki A, "A mutant gibberellin-synthesis gene in rice" 416 : 701-702, 2002

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2015-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2012-05-07 학술지명변경 한글명 : 한국유전학회지 -> Genes & Genomics KCI등재
      2011-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2009-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2008-04-14 학술지명변경 외국어명 : Korean Journal of Genetics -> Genes and Genomics KCI등재
      2007-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2004-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2003-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2002-01-01 평가 등재후보학술지 유지 (등재후보1차) KCI등재후보
      1999-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.51 0.12 0.38
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.32 0.27 0.258 0.02
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