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      Detection of Escherichia coli O157:H7, Listeria monocytogenes, Salmonella spp. and Staphylococcus aureus using duplex real-time PCR assay with melting curve analysis on fresh lettuce

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      https://www.riss.kr/link?id=A104492384

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      다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

      In this study, two duplex real-time PCR approach with melting curve analysis is presented for the detection of Escherichia coli O157:H7, Listeria monocytogenes, Salmonella spp. and Staphylococcus aureus, which are important food-borne bacterial pathogens usually present in fresh and/or minimally processed vegetables. Reaction conditions were adjusted for the simultaneous amplification and detection of specific fragments in the β-glucuronidase (uidA, E. coli), thermonuclease (nuc, S. aureus), hemolycin (hly, L. monocytogenes) and tetrathionate reductase (ttr, Salmonella spp.) genes. Melting curve analysis using a SYBR Green I real-time PCR approach showed characteristic Tm values demonstrating the specific and efficient amplification of the four pathogens; 80.6 ± 0.9 ℃,86.9 ± 0.5 ℃, 80.4 ± 0.6 ℃ and 88.1 ± 0.11 ℃ for S. aureus, E. coli O157:H7, L. monocytogenes and Salmonella spp.,respectively. For all the pathogens, the two duplex, real-time PCR was equally sensitive to uniplex real-time PCR,using same amounts of purified DNA, and allowed detection of 10 genome equivalents. When our established duplex real-time PCR assay was applied to artificially inoculated fresh lettuce, the detection limit was 10³ CFU/g for each of these pathogens without enrichment. The results from this study showed that the developed duplex real-time PCR with melting curve analysis is promising as a rapid and cost-effective test method for improving food safety.
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      In this study, two duplex real-time PCR approach with melting curve analysis is presented for the detection of Escherichia coli O157:H7, Listeria monocytogenes, Salmonella spp. and Staphylococcus aureus, which are important food-borne bacterial pathog...

      In this study, two duplex real-time PCR approach with melting curve analysis is presented for the detection of Escherichia coli O157:H7, Listeria monocytogenes, Salmonella spp. and Staphylococcus aureus, which are important food-borne bacterial pathogens usually present in fresh and/or minimally processed vegetables. Reaction conditions were adjusted for the simultaneous amplification and detection of specific fragments in the β-glucuronidase (uidA, E. coli), thermonuclease (nuc, S. aureus), hemolycin (hly, L. monocytogenes) and tetrathionate reductase (ttr, Salmonella spp.) genes. Melting curve analysis using a SYBR Green I real-time PCR approach showed characteristic Tm values demonstrating the specific and efficient amplification of the four pathogens; 80.6 ± 0.9 ℃,86.9 ± 0.5 ℃, 80.4 ± 0.6 ℃ and 88.1 ± 0.11 ℃ for S. aureus, E. coli O157:H7, L. monocytogenes and Salmonella spp.,respectively. For all the pathogens, the two duplex, real-time PCR was equally sensitive to uniplex real-time PCR,using same amounts of purified DNA, and allowed detection of 10 genome equivalents. When our established duplex real-time PCR assay was applied to artificially inoculated fresh lettuce, the detection limit was 10³ CFU/g for each of these pathogens without enrichment. The results from this study showed that the developed duplex real-time PCR with melting curve analysis is promising as a rapid and cost-effective test method for improving food safety.

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      참고문헌 (Reference)

      1 Maurer, J. J, "The mythology of PCR: a warning to the wise, in the PCR Methods in Foods. Food Microbiology and Food Safety Series" Springer 27-40, 2006

      2 Omiccioli, E., "Simultaneous direct detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in milk samples by magnetic extraction and multiplex PCR" 17 : 195-213, 2009

      3 Alarcón, B., "Simultaneous and sensitive detection of three foodborne pathogens by multiplex PCR, capillary gel electrophoresis and laser induced fluorescence" 52 : 7180-7186, 2004

      4 Toze, S, "Reuse of effluent water-benefits and risks" 80 : 147-159, 2006

      5 Jothikimar, N, "Real-time multiplex SYBR greenI-based PCR assay for simultaneous detection of Salmonella serovars and Listeria monocytogenes" 66 : 2141-2145, 2003

      6 Wittwer, C. T, "Real-time multiplex PCR assays" 25 : 430-442, 2001

      7 O'Grandy, J, "Rapid real-time PCR detection of Listeria monocytogenes in enriched food samples based on the ssrA gene, a novel diagnostic targe" 25 : 75-84, 2008

      8 Fu, Z., "Rapid detection of Escherichia coli O157:H7 by immunomagnetic separation and real time PCR" 99 : 47-57, 2005

      9 Ririe, K. M., "Product differentiation by analysis of DNA melting curves during the polymerase chain reaction" 65 : 1370-1372, 1997

      10 Alarcón, B, "PCR-based procedures for the detection and quantification of Staphylococcus aureus and their application in food" 100 : 352-364, 2006

      1 Maurer, J. J, "The mythology of PCR: a warning to the wise, in the PCR Methods in Foods. Food Microbiology and Food Safety Series" Springer 27-40, 2006

      2 Omiccioli, E., "Simultaneous direct detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in milk samples by magnetic extraction and multiplex PCR" 17 : 195-213, 2009

      3 Alarcón, B., "Simultaneous and sensitive detection of three foodborne pathogens by multiplex PCR, capillary gel electrophoresis and laser induced fluorescence" 52 : 7180-7186, 2004

      4 Toze, S, "Reuse of effluent water-benefits and risks" 80 : 147-159, 2006

      5 Jothikimar, N, "Real-time multiplex SYBR greenI-based PCR assay for simultaneous detection of Salmonella serovars and Listeria monocytogenes" 66 : 2141-2145, 2003

      6 Wittwer, C. T, "Real-time multiplex PCR assays" 25 : 430-442, 2001

      7 O'Grandy, J, "Rapid real-time PCR detection of Listeria monocytogenes in enriched food samples based on the ssrA gene, a novel diagnostic targe" 25 : 75-84, 2008

      8 Fu, Z., "Rapid detection of Escherichia coli O157:H7 by immunomagnetic separation and real time PCR" 99 : 47-57, 2005

      9 Ririe, K. M., "Product differentiation by analysis of DNA melting curves during the polymerase chain reaction" 65 : 1370-1372, 1997

      10 Alarcón, B, "PCR-based procedures for the detection and quantification of Staphylococcus aureus and their application in food" 100 : 352-364, 2006

      11 Jinneman, K. C, "Multiplex real-time PCR method to identify shiga toxin genes stx1 and stx2 and Escherichia coli O157:H7/H− serotype" 69 : 6327-6333, 2003

      12 Markoulatos, P, "Multiplex polymerase chain reaction: a practical approach" 16 : 47-51, 2002

      13 Elnifro, E. M., "Multiplex PCR: optimization and application in diagnostic virology" 13 : 559-570, 2000

      14 Kawasaki, S, "Multiplex PCR for simultaneous detection of Salmonella spp., Listeria monocytogenes and Escherichia coli O157 in meat samples" 68 : 551-556, 2005

      15 Thunberg, R. L., "Microbial evaluation of elected fresh produce obtained at retail markets" 65 : 677-682, 2002

      16 Brackett, R. E, "Incidence, contributing factors, and control of bacterial pathogens in produce" 15 : 301-311, 1999

      17 Anonymous, "FDA survey of imported fresh produce. No. 2000"

      18 Kimura, B., "Evaluation TaqMan PCR assay for detecting Salmonella in raw meat and shrimp" 62 : 329-335, 1999

      19 Fujikawa, H., "Estimation of viable Salmonella cell numbers in meat and meat product using real-time PCR" 49 : 261-265, 2008

      20 Rangel, J. M., "Epidemiology of Escherichia coli O157:H7 outbreaks, United States, 1982-2002" 11 : 603-609, 2005

      21 Wang, X. W, "Enrichments and DNA extraction protocols for the simultaneous detection of Salmonella and Listeria monocytogenes in raw sausage meat with multiplex real-time PCR" 67 : 189-192, 2004

      22 Amagliani, G., "Development of a magnetic capture hybridization-PCR assay for Listeria monocytogenes direct detection in milk samples" 100 : 375-383, 2006

      23 Aslam, M., "Development of a PCRbased assay to detect Shiga toxin-producint Escherichia coli, Listeria monocytogenes and Salmonella in milk" 20 : 345-350, 2003

      24 Yoshitomi, K. J, "Detection of shiga toxin genes stx1, stx2, and the +93 uidA mutant of E. coli O157:H7/H− using SYBR GreenI in a real-time multiplex PCR" 20 : 31-41, 2006

      25 Rossmanith, P., "Detection of Listeria monocytogenes in food using a combined enrichment/real-time PCR method targeting the prfA gene" 157 : 763-771, 2006

      26 Nguyen, L. T., "Detection of Escherichia coli O157:H7 and Listeria monocytogenes in beef products by real time PCR" 1 : 231-240, 2004

      27 Shrestha, N. K, "Detection and differentiation of Mycobacterium tuberculosis and nontuberculos mycobacterial isolates by real time PCR" 41 : 5121-5126, 2003

      28 Giglio, S., "Demonstration of preferential binding of SYBR GreenI to specific DNA fragments in real-time multiplex PCR" 31 : 136-, 2003

      29 Lipsky, R. H, "DNA melting analysis for detection of single nucleotide polymorphisms" 47 : 635-644, 2001

      30 Bohaychuk, V. M., "A real-time PCR assay for the detection of Salmonella in a wide variety of food-animal matrices" 70 : 1080-1087, 2007

      31 Holicka, J., "A rapid (one day), sensitive real-time polymerase chain reaction assay for detecting Escherichia coli O157:H7 in ground beef" 52 : 992-998, 2006

      32 Elizaquível, P., "A multiplex RTi-PCR reaction for simultaneous detection of Escherichia coli O157:H7, Salmonella spp. and Staphylococcus aureus on fresh, minimally processed vegetables" 25 : 705-713, 2008

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2026 평가예정 재인증평가 신청대상 (재인증)
      2020-01-01 평가 등재학술지 유지 (재인증) KCI등재
      2017-01-01 평가 등재학술지 유지 (계속평가) KCI등재
      2013-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2010-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2009-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2008-01-01 평가 등재후보 1차 FAIL (등재후보1차) KCI등재후보
      2006-07-21 학회명변경 영문명 : The Korean Sociery Of Food Hygiene And Safety -> The Korean Society of Food Hygiene and Safety KCI등재후보
      2006-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.45 0.45 0.48
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.49 0.49 0.726 0.08
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