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    KCI등재 SCIE SCOPUS

    History of Nucleotide Sequencing Technologies:Advances in Exploring Nucleotide Sequences from Mendel to the 21st Century

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    https://www.riss.kr/link?id=A106387558

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    다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

    In the mid-2000s, sequencing technology evolved into second-generation sequencing methods that provided low-cost, high-efficiency, and high-throughput data, compared to the traditional firstgeneration sequencing methods such as Sanger and Maxam-Gilbert technologies. The second-generation technology initiated a new era of genomics research due to a large amount of data generated by innovative pyrosequencing technology. Basically, the second-generation sequencing methods offer multiple depths of nucleotide sequences with short lengths. This is the reason why it is also called deep sequencing technology. Due to in-depth sequencing, it can be used for a variety of genetics research applications, such as genotyping and gene expression studies. However, second-generation sequencing generates short reads, which are not desirable for full genome assembly. As a result, some researchers started seeking ways to generate longer reads. Consequently, third-generation sequencing that can produce much longer sequences and supplement the shortcomings of previous technologies has been developed. In this article, we briefly review the principles and characteristics of each generation of sequencing technology as well as the latest trends.
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    In the mid-2000s, sequencing technology evolved into second-generation sequencing methods that provided low-cost, high-efficiency, and high-throughput data, compared to the traditional firstgeneration sequencing methods such as Sanger and Maxam-Gilber...

    In the mid-2000s, sequencing technology evolved into second-generation sequencing methods that provided low-cost, high-efficiency, and high-throughput data, compared to the traditional firstgeneration sequencing methods such as Sanger and Maxam-Gilbert technologies. The second-generation technology initiated a new era of genomics research due to a large amount of data generated by innovative pyrosequencing technology. Basically, the second-generation sequencing methods offer multiple depths of nucleotide sequences with short lengths. This is the reason why it is also called deep sequencing technology. Due to in-depth sequencing, it can be used for a variety of genetics research applications, such as genotyping and gene expression studies. However, second-generation sequencing generates short reads, which are not desirable for full genome assembly. As a result, some researchers started seeking ways to generate longer reads. Consequently, third-generation sequencing that can produce much longer sequences and supplement the shortcomings of previous technologies has been developed. In this article, we briefly review the principles and characteristics of each generation of sequencing technology as well as the latest trends.

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    참고문헌 (Reference)

    1 Caporaso JG, "Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms" 6 : 1621-1624, 2012

    2 Dressman D, "Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations" 100 : 8817-8822, 2003

    3 Bleidorn C, "Third generation sequencing : Technology and its potential impact on evolutionary biodiversity research" 14 : 1-8, 2016

    4 Branton D, "The potential and challenges of nanopore sequencing" 26 : 1146-1153, 2008

    5 Chargaff E, "The nucleic acids" Elsevier 2012

    6 Rothberg JM, "The development and impact of 454 sequencing" 26 : 1117-, 2008

    7 Van Dijk EL, "Ten years of next-generation sequencing technology" 30 : 418-426, 2014

    8 Metzker ML, "Sequencing technologies—the next generation" 11 : 31-46, 2010

    9 Martin RG, "Ribonucleotide composition of the genetic code" 6 : 410-414, 1961

    10 Eid J, "Real-time DNA sequencing from single polymerase molecules" 323 : 133-138, 2009

    1 Caporaso JG, "Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms" 6 : 1621-1624, 2012

    2 Dressman D, "Transforming single DNA molecules into fluorescent magnetic particles for detection and enumeration of genetic variations" 100 : 8817-8822, 2003

    3 Bleidorn C, "Third generation sequencing : Technology and its potential impact on evolutionary biodiversity research" 14 : 1-8, 2016

    4 Branton D, "The potential and challenges of nanopore sequencing" 26 : 1146-1153, 2008

    5 Chargaff E, "The nucleic acids" Elsevier 2012

    6 Rothberg JM, "The development and impact of 454 sequencing" 26 : 1117-, 2008

    7 Van Dijk EL, "Ten years of next-generation sequencing technology" 30 : 418-426, 2014

    8 Metzker ML, "Sequencing technologies—the next generation" 11 : 31-46, 2010

    9 Martin RG, "Ribonucleotide composition of the genetic code" 6 : 410-414, 1961

    10 Eid J, "Real-time DNA sequencing from single polymerase molecules" 323 : 133-138, 2009

    11 Nirenberg M, "RNA codewords and protein synthesis : The effect of trinucleotides upon the binding of sRNA to ribosomes" 145 : 1399-1407, 1964

    12 Ronaghi M, "Pyrosequencing sheds light on DNA sequencing" 11 : 3-11, 2001

    13 Merriman B, "Progress in ion torrent semiconductor chip based sequencing" 33 : 3397-3417, 2012

    14 Rhoads A, "PacBio sequencing and its applications" 13 : 278-289, 2015

    15 Schuster SC, "Next-generation sequencing transforms today’s biology" 5 : 16-, 2007

    16 Mardis ER, "Next-generation sequencing platforms" 6 : 287-303, 2013

    17 Jain M, "Nanopore sequencing and assembly of a human genome with ultra-long reads" 36 : 338-, 2018

    18 Watson JD, "Molecular structure of nucleic acids" 171 : 737-738, 1953

    19 Head SR, "Library construction for next-generation sequencing : Overviews and challenges" 56 : 61-77, 2014

    20 Hunkapiller T, "Large-scale and automated DNA sequence determination" 254 : 59-67, 1991

    21 Hershey AD, "Independent functions of viral protein and nucleic acid in growth of bacteriophage" 36 : 39-56, 1952

    22 Reuter JA, "High-throughput sequencing technologies" 58 : 586-597, 2015

    23 정용석, "Genotyping-by-Sequencing: a Promising Tool for Plant Genetics Research and Breeding" 한국원예학회 58 (58): 425-431, 2017

    24 Pierce BA, "Genetics: A conceptual approach" W. H. Freeman and Company 2012

    25 Lim BC, "Genetic diagnosis of Duchenne and Becker muscular dystrophy using next-generation sequencing technology : Comprehensive mutational search in a single platform" 48 : 731-736, 2011

    26 Metzker ML, "Emerging technologies in DNA sequencing" 15 : 1767-1776, 2005

    27 Sanger F, "DNA sequencing with chain-terminating inhibitors" 74 : 5463-5467, 1977

    28 Hutchison III CA, "DNA sequencing : Bench to bedside and beyond" 35 : 6227-6237, 2007

    29 Matthaei JH, "Characteristics and composition of RNA coding units" 48 : 666-677, 1962

    30 Leggett RM, "A world of opportunities with nanopore sequencing" 68 : 5419-5429, 2017

    31 Quail MA, "A tale of three next-generation sequencing platforms : Comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers" 13 : 341-, 2012

    32 França LT, "A review of DNA sequencing techniques" 35 : 169-200, 2002

    33 Sanger F, "A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase" 94 : 441-448, 1975

    34 Maxam AM, "A new method for sequencing DNA" 74 : 560-564, 1977

    35 Li FW, "A guide to sequence your favorite plant genomes" 6 (6): e1030-, 2018

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    학술지 이력
    연월일 이력구분 이력상세 등재구분
    2023 평가 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
    2020-01-01 등재 등재학술지 유지 (해외등재 학술지 평가) KCI등재
    2017-02-08 학술지명변경 외국어명 : Korean Journal of Horticultural Science & Technology -> Horticultural Science & Technology KCI등재
    2011-01-01 등재 등재학술지 유지 (등재유지) KCI등재
    2009-01-01 등재 등재학술지 유지 (등재유지) KCI등재
    2007-01-01 등재 등재학술지 유지 (등재유지) KCI등재
    2004-01-01 등재 등재후보학술지 선정 (신규평가) KCI등재후보
    2003-01-01 등재 등재후보 1차 PASS (등재후보1차) KCI등재후보
    2002-07-01 등재 등재후보학술지 선정 (신규평가) KCI등재후보
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    학술지 인용정보
    기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
    2016 0.92 0.74 0.83
    KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
    0.77 0.73 1.115 0.19
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