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      Molecular phylogeny and the biogeographic origin of East Asian Isoёtes (Isoёtaceae)

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      https://www.riss.kr/link?id=A105981485

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      다국어 초록 (Multilingual Abstract)

      Isoёtes L. (Isoёtaceae) is a cosmopolitan genus of heterosporous lycopods containing ca. 200 spe- cies being found in lakes, streams, and wetlands of terrestrial habitats. Despite its ancient origin, worldwide dis- tribution, and adaptation to diverse environment, species in Isoёtes show remarkable morphological simplicity and convergence. Allopolyploidy appears to be a significant speciation process in the genus. These character- istics have made it difficult to assess the phylogenetic relationships and biogeographic history of Isoёtes spe- cies. In recent years, these difficulties have somewhat been reduced by employing multiple molecular markers. Here, we reconstruct the phylogenetic relationships in East Asian Isoёtes species. We also provide their diver- gence time and biogeographic origin using a fossil calibrated chronogram. East Asian Isoёtes species are divided into two clades: I. asiatica and the remaining species. Isoёtes asiatica from Hokkaido forms a clade with north- eastern Russian and western North American Isoёtes species. In clade I, western North America is the source area for the dispersal of Isoёtes to Hokkaido and northeastern Russia via the Bering land bridge during the late Miocene. The remaining Isoёtes species (I. sinensis, I. yunguiensis, I. hypsophila, I. orientalis, I. japonica, I. coreana, I. taiwanensis, I. jejuensis, I. hallasanensis) from East Asia form a sister group to Papua New Guinean and Australian species. The biogeographic reconstruction suggests an Australian origin for the East Asian spe- cies that arose through long-distance dispersal during the late Oligocene.
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      Isoёtes L. (Isoёtaceae) is a cosmopolitan genus of heterosporous lycopods containing ca. 200 spe- cies being found in lakes, streams, and wetlands of terrestrial habitats. Despite its ancient origin, worldwide dis- tribution, and adaptation to d...

      Isoёtes L. (Isoёtaceae) is a cosmopolitan genus of heterosporous lycopods containing ca. 200 spe- cies being found in lakes, streams, and wetlands of terrestrial habitats. Despite its ancient origin, worldwide dis- tribution, and adaptation to diverse environment, species in Isoёtes show remarkable morphological simplicity and convergence. Allopolyploidy appears to be a significant speciation process in the genus. These character- istics have made it difficult to assess the phylogenetic relationships and biogeographic history of Isoёtes spe- cies. In recent years, these difficulties have somewhat been reduced by employing multiple molecular markers. Here, we reconstruct the phylogenetic relationships in East Asian Isoёtes species. We also provide their diver- gence time and biogeographic origin using a fossil calibrated chronogram. East Asian Isoёtes species are divided into two clades: I. asiatica and the remaining species. Isoёtes asiatica from Hokkaido forms a clade with north- eastern Russian and western North American Isoёtes species. In clade I, western North America is the source area for the dispersal of Isoёtes to Hokkaido and northeastern Russia via the Bering land bridge during the late Miocene. The remaining Isoёtes species (I. sinensis, I. yunguiensis, I. hypsophila, I. orientalis, I. japonica, I. coreana, I. taiwanensis, I. jejuensis, I. hallasanensis) from East Asia form a sister group to Papua New Guinean and Australian species. The biogeographic reconstruction suggests an Australian origin for the East Asian spe- cies that arose through long-distance dispersal during the late Oligocene.

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      참고문헌 (Reference)

      1 정종덕, "우리나라 물부추속 (물부추과)에 대한 분류학적 고찰" 한국식물분류학회 39 (39): 63-73, 2009

      2 Shukla, P. K., "Two new species of the genus Isoetes L. (Isoetaceae-Lycopsida) from India" 54 : 109-116, 2005

      3 최홍근, "Two new species of Isoetes (Isoetaceae) from Jeju Island, South Korea" 한국식물학회 51 (51): 354-358, 2008

      4 Hickey, R. J., "The species concept in Pteridophyta with special reference to Isoëtes" 79 : 78-89, 1989

      5 Sharma, B. D., "The ligule in Isoëtes" 74 : 22-28, 1984

      6 Troia, A., "The genus Isoëtes (Isoetaceae): a provisional checklist of the accepted and unresolved taxa" 277 : 101-145, 2017

      7 McLoughlin, S., "The breakup history of Gondwana and its impact on pre-Cenozoic floristic provincialism" 49 : 271-300, 2001

      8 김창균, "Systematic Evaluation of Isoëtes asiatica Makino (Isoëtaceae) based on AFLP, nrITS, and Chloroplast DNA Sequences" 한국식물학회 52 (52): 501-510, 2009

      9 Kim, C., "Speciation pathway of Isoëtes (Isoëtaceae) in East Asia inferred from molecular phylogenetic relationships" 97 : 958-969, 2010

      10 Hoot, S. B., "Revealing unknown or extinct lineages within Isoëtes (Isoëtaceae) using DNA sequences from hybrids" 91 : 899-904, 2004

      1 정종덕, "우리나라 물부추속 (물부추과)에 대한 분류학적 고찰" 한국식물분류학회 39 (39): 63-73, 2009

      2 Shukla, P. K., "Two new species of the genus Isoetes L. (Isoetaceae-Lycopsida) from India" 54 : 109-116, 2005

      3 최홍근, "Two new species of Isoetes (Isoetaceae) from Jeju Island, South Korea" 한국식물학회 51 (51): 354-358, 2008

      4 Hickey, R. J., "The species concept in Pteridophyta with special reference to Isoëtes" 79 : 78-89, 1989

      5 Sharma, B. D., "The ligule in Isoëtes" 74 : 22-28, 1984

      6 Troia, A., "The genus Isoëtes (Isoetaceae): a provisional checklist of the accepted and unresolved taxa" 277 : 101-145, 2017

      7 McLoughlin, S., "The breakup history of Gondwana and its impact on pre-Cenozoic floristic provincialism" 49 : 271-300, 2001

      8 김창균, "Systematic Evaluation of Isoëtes asiatica Makino (Isoëtaceae) based on AFLP, nrITS, and Chloroplast DNA Sequences" 한국식물학회 52 (52): 501-510, 2009

      9 Kim, C., "Speciation pathway of Isoëtes (Isoëtaceae) in East Asia inferred from molecular phylogenetic relationships" 97 : 958-969, 2010

      10 Hoot, S. B., "Revealing unknown or extinct lineages within Isoëtes (Isoëtaceae) using DNA sequences from hybrids" 91 : 899-904, 2004

      11 Hoot, S. B., "Phylogeny and biogeography of Isoëtes (Isoëtaceae) based on nuclear and chloroplast DNA sequence data" 31 : 449-460, 2006

      12 Taylor, W. C., "Phylogenetic relationships of Isoëtes (Isoëtaceae) in China as revealed by nucleotide sequences of the nuclear ribosomal ITS region and the second intron of a LEAFY homolog" 94 : 196-205, 2004

      13 Iturralde-Vinent, M. A., "Paleogeography of the Caribbean region: implications for cenozoic biogeography" 238 : 1-95, 1999

      14 Pereira, J. B. S., "Origin and biogeography of the ancient genus Isoëtes with focus on the Neotropics" 185 : 253-271, 2017

      15 Jung, J., "Morphological and molecular characterization of a new record of Isoëtes coromandelina subsp. coromandelina from Cambodia" 300 : 43-50, 2013

      16 Pfeiffer, N. E., "Monograph of the Isoetaceae" 9 : 79-233, 1922

      17 Wang, Q.-F., "Isoëtes yunguiensis (Isoëtaceae), a new basic diploid quillwort from China" 12 : 587-591, 2002

      18 Takamiya, M., "Isoëtes sinensis var. sinensis in Korea (Isoëtaceae: Pteridophyta)" 16 : 169-170, 2001

      19 Fuchs-Eckert, H. P., "Isoëtes palmeri H.P. Fuchs, eine neue Isoëtes-Art des Paramo" 84 : 165-174, 1981

      20 Liu, H., "Isoëtes orientalis (Isoëtaceae), a new hexaploid quillwort from China" 15 : 164-167, 2005

      21 Hickey, R. J, "Isoëtes megaspore surface morphology: nomenclature, variation, and systematic importance" 76 : 1-16, 1986

      22 Kim, C., "Isoëtes laosiensis, a new species from Lao PDR" 100 : 45-53, 2010

      23 DeVol, C. E, "Isoetes found on Taiwan" 17 : 1-7, 1972

      24 Chung, Y. H., "Isoetes coreana, a new species from Korea" 16 : 1-12, 1986

      25 Pigg, K. B., "Isoetalean lycopsid evolution: from the Devonian to the present" 91 : 99-114, 2001

      26 Morley, R. J, "Interplate dispersal paths for megathermal angiosperms" 6 : 5-20, 2003

      27 Pryer, K. M., "Horsetails and ferns are a monophyletic group and the closest living relatives to seed plants" 409 : 618-622, 2001

      28 Taylor, W. C., "Habitat, evolution, and speciation in Isoetes" 79 : 613-622, 1992

      29 Kim, C., "Genetic diversity and population structure of endangered Isoetes coreana in South Korea based on RAPD analysis" 89 : 43-49, 2008

      30 Kim, C., "Genetic diversity and population structure of diploid and polyploid species of Isoëtes in East Asia based on amplified fragment length polymorphism markers" 170 : 496-504, 2009

      31 Jung, J., "Genetic diversity and population structure of Indian Isoëtes dixitei Shende based on amplified fragment length polymorphisms and intron sequences of LEAFY" 113 : 1-7, 2014

      32 Kang, M., "Genetic consequence of restricted habitat and population decline in endangered Isoetes sinensis (Isoetaceae)" 96 : 1265-1274, 2005

      33 Taylor, W. C., "Flora of North America, Vol. 2. Pteridophytes and Gymnosperms" Oxford University Press 64-75, 1993

      34 Nie, Z.-L., "Evolution of the intercontinental disjunctions in six continents in the Ampelopsis clade of the grape family (Vitaceae)" 12 : 17-, 2012

      35 Yatsentyuk, S. P., "Evolution of Lycopodiaceae inferred from spacer sequencing of chloroplast rRNA genes" 37 : 1068-1073, 2001

      36 Wang, J.-Y., "Ecology and conservation of the endangered quillwort Isoëtes sinensis in China" 39 : 4096-4079, 2005

      37 Liu, X., "Distribution of basic diploid and polyploidy species of Isoetes in East Asia" 31 : 1239-1250, 2004

      38 Larsén, E., "Disentangling the phylogeny of Isoëtes (Isoetales) using nuclear and plastid data" 177 : 157-174, 2016

      39 Park, H., "Development of chloroplast microsatellite markers for the endangered Maianthemum bicolor (Asparagaceae s.l.)" 4 : 160032-, 2016

      40 Cox, P. A., "Convergent megaspore evolution and Isoetes" 124 : 437-441, 1984

      41 Karol, K. G., "Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages" 10 : 321-, 2010

      42 Firetti, F., "Complete chloroplast genome sequences contribute to plant species delimitation: a case study of the Anemopaegma species complex" 104 : 1493-1509, 2017

      43 Lee, T. B., "Coloured Flora of Korea, Vol. 1" Hyangmunsa 914-, 2003

      44 Takamiya, M., "Biosystematic studies on the genus Isoëtes (Isoëtaceae) in Japan. IV. Morphology and anatomy of sporophytes, phytogeography and taxonomy" 48 : 89-122, 1997

      45 김창균, "Biogeography of North Pacific Isoëtes (Isoëtaceae) inferred from nuclear and chloroplast DNA sequence data" 한국식물학회 59 (59): 386-396, 2016

      46 Raven, P. H., "Angiosperm biogeography and past continental movements" 61 : 539-673, 1974

      47 Hickey, R. J., "A re-evaluation of Isoetes savatieri Franchet in Argentina and Chile" 93 : 126-136, 2003

      48 Smith, A. R., "A classification for extant ferns" 55 : 705-731, 2006

      49 Palmer, T. C., "A Chinese Isoëtes" 17 : 111-113, 1927

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