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      KCI등재 SCOPUS SCIE

      Circular RNA circ-4099 is induced by TNF-α and regulates ECM synthesis by blocking miR-616-5p inhibition of Sox9 in intervertebral disc degeneration

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      https://www.riss.kr/link?id=A106057514

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      다국어 초록 (Multilingual Abstract)

      Circular RNAs (circRNAs) play important roles in the initiation and development of different diseases. Here, we detected their role in intervertebral disc (IVD) degeneration. An Arraystar human circular RNA microarray assay was used to detect circRNAs...

      Circular RNAs (circRNAs) play important roles in the initiation and development of different diseases. Here, we detected their role in intervertebral disc (IVD) degeneration. An Arraystar human circular RNA microarray assay was used to detect circRNAs in normal and degenerated human IVD nucleus pulposus (NP) tissues. The role of circ-4099 in IVDD and its mechanism were evaluated by qRT-PCR and gain-of-function/loss-of-function studies. Interaction networks for competing endogenous RNAs (ceRNAs), miRNAs, and miRNA target gene were detected by bioinformatics analysis, RNA immunoprecipitation and luciferase assay. Expression of seventy-two circRNAs were increased by more than twofold in degenerated NP tissues. qRT-PCR showed that the expression of circ-4099 in NP tissues was consistent with that of the array screening. Over-expression of circ-4099 increased the expression of Collagen II and Aggrecan and decreased the secretion of the pro-inflammatory factors IL-1β, TNF-α, and PGE2. TNF-α treatment increased circ-4099 expression in NP cells. NF-κB/MAPK inhibitors or shRNAs abolished the inductive effects of TNF-α on circ-4099 expression. We further demonstrated that circ-4099 was able to function as a “sponge” by competitively binding miR-616-5p, which reversed the suppression of Sox9 by miR-616-5p. We used DNA pull-down and spectrometry experiments to show that TNF-α can promote circ-4099 transcription through upregulation of GRP78. We provide the first evidence that shows circRNAs are differentially expressed in degenerated and normal NP tissues. Circ-4099 may play a role in a protective mechanism and be part of a compensatory response that maintains the synthesis and secretion of the extracellular matrix in NP cells and might be a protective factor in IVD degeneration as well as restore NP cell function.

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      참고문헌 (Reference)

      1 Thomas B Hansen, "miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA" Wiley 30 (30): 4414-4422, 2011

      2 Reut Ashwal-Fluss, "circRNA Biogenesis Competes with Pre-mRNA Splicing" Elsevier BV 56 (56): 55-66, 2014

      3 Xin Wang, "Tumor Necrosis Factor-α– and Interleukin-1β–Dependent Matrix Metalloproteinase-3 Expression in Nucleus Pulposus Cells Requires Cooperative Signaling via Syndecan 4 and Mitogen-Activated Protein Kinase–NF-κB Axis" Elsevier BV 184 (184): 2560-2572, 2014

      4 Helen E. Gruber, "The SOX9 Transcription Factor in the Human Disc: Decreased Immunolocalization With Age and Disc Degeneration" Ovid Technologies (Wolters Kluwer Health) 30 (30): 625-630, 2005

      5 Yong-Jik Lee, "The Relation Between Sox9, TGF-β1,and Proteoglycan in HumanIntervertebral Disc Cells" 대한신경외과학회 43 (43): 149-154, 2008

      6 Wei Sun, "Sox9 Gene Transfer Enhanced Regenerative Effect of Bone Marrow Mesenchymal Stem Cells on the Degenerated Intervertebral Disc in a Rabbit Model" Public Library of Science (PLoS) 9 (9): e93570-, 2014

      7 Hua Wang, "Role of death receptor, mitochondrial and endoplasmic reticulum pathways in different stages of degenerative human lumbar disc" Springer Nature 16 (16): 990-1003, 2011

      8 Makarand V. Risbud, "Nucleus pulposus cells express HIF-1α under normoxic culture conditions: A metabolic adaptation to the intervertebral disc microenvironment" Wiley 98 (98): 152-159, 2006

      9 van Dieen, J. H, "Nonspecific low back pain" 379 : 1874-, 2012

      10 Thomas B. Hansen, "Natural RNA circles function as efficient microRNA sponges" Springer Nature 495 (495): 384-388, 2013

      1 Thomas B Hansen, "miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA" Wiley 30 (30): 4414-4422, 2011

      2 Reut Ashwal-Fluss, "circRNA Biogenesis Competes with Pre-mRNA Splicing" Elsevier BV 56 (56): 55-66, 2014

      3 Xin Wang, "Tumor Necrosis Factor-α– and Interleukin-1β–Dependent Matrix Metalloproteinase-3 Expression in Nucleus Pulposus Cells Requires Cooperative Signaling via Syndecan 4 and Mitogen-Activated Protein Kinase–NF-κB Axis" Elsevier BV 184 (184): 2560-2572, 2014

      4 Helen E. Gruber, "The SOX9 Transcription Factor in the Human Disc: Decreased Immunolocalization With Age and Disc Degeneration" Ovid Technologies (Wolters Kluwer Health) 30 (30): 625-630, 2005

      5 Yong-Jik Lee, "The Relation Between Sox9, TGF-β1,and Proteoglycan in HumanIntervertebral Disc Cells" 대한신경외과학회 43 (43): 149-154, 2008

      6 Wei Sun, "Sox9 Gene Transfer Enhanced Regenerative Effect of Bone Marrow Mesenchymal Stem Cells on the Degenerated Intervertebral Disc in a Rabbit Model" Public Library of Science (PLoS) 9 (9): e93570-, 2014

      7 Hua Wang, "Role of death receptor, mitochondrial and endoplasmic reticulum pathways in different stages of degenerative human lumbar disc" Springer Nature 16 (16): 990-1003, 2011

      8 Makarand V. Risbud, "Nucleus pulposus cells express HIF-1α under normoxic culture conditions: A metabolic adaptation to the intervertebral disc microenvironment" Wiley 98 (98): 152-159, 2006

      9 van Dieen, J. H, "Nonspecific low back pain" 379 : 1874-, 2012

      10 Thomas B. Hansen, "Natural RNA circles function as efficient microRNA sponges" Springer Nature 495 (495): 384-388, 2013

      11 Amy E. Pasquinelli, "MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship" Springer Nature 13 (13): 271-282, 2012

      12 DI ZHANG, "MicroRNA-616 promotes the migration, invasion and epithelial-mesenchymal transition of HCC by targeting PTEN" Spandidos Publications 35 (35): 366-374, 2016

      13 Stephanie Ma, "MicroRNA-616 Induces Androgen-Independent Growth of Prostate Cancer Cells by Suppressing Expression of Tissue Factor Pathway Inhibitor TFPI-2" American Association for Cancer Research (AACR) 71 (71): 583-592, 2011

      14 Tingjie Chang, "MicroRNA-30a promotes extracellular matrix degradation in articular cartilage via downregulation of Sox9" Wiley 49 (49): 207-218, 2016

      15 Bo Yang, "MicroRNA-145 Regulates Chondrogenic Differentiation of Mesenchymal Stem Cells by Targeting Sox9" Public Library of Science (PLoS) 6 (6): e21679-, 2011

      16 Anton J Enright, "MicroRNA targets in Drosophila" Springer Nature 5 (5): R1-, 2003

      17 Christian W. A. Pfirrmann, "Magnetic Resonance Classification of Lumbar Intervertebral Disc Degeneration" Ovid Technologies (Wolters Kluwer Health) 26 (26): 1873-1878, 2001

      18 G. Livshits, "Lumbar disc degeneration and genetic factors are the main risk factors for low back pain in women: the UK Twin Spine Study" BMJ 70 (70): 1740-1745, 2011

      19 Fang-Chun Sun, "Localization of GRP78 to mitochondria under the unfolded protein response" Portland Press Ltd. 396 (396): 31-39, 2006

      20 Lu, H., "Lentiviral vector-mediated over-expression of Sox9 protected chondrocytes from IL-1beta induced degeneration and apoptosis" 8 : 10038-10049, 2015

      21 Hua Wang, "Inflammatory Cytokines Induce NOTCH Signaling in Nucleus Pulposus Cells" American Society for Biochemistry & Molecular Biology (ASBMB) 288 (288): 16761-16774, 2013

      22 Roberts, S, "Histology and pathology of the human intervertebral disc" 88 (88): 10-14, 2006

      23 Jakub O. Westholm, "Genome-wide Analysis of Drosophila Circular RNAs Reveals Their Structural and Sequence Properties and Age-Dependent Neural Accumulation" Elsevier BV 9 (9): 1966-1980, 2014

      24 Pei Li, "Estrogen Enhances Matrix Synthesis in Nucleus Pulposus Cell through the Estrogen Receptor β-p38 MAPK Pathway" Cell Physiol Biochem Press GmbH and Co KG 39 (39): 2216-2226, 2016

      25 Xin Li, "Effect of microRNA-101 on apoptosis of rabbit condylar cartilage cells by inhibiting target gene SOX9" Medknow 8 (8): 502-505, 2015

      26 Andrea L. Marat, "DENN Domain Proteins: Regulators of Rab GTPases" American Society for Biochemistry & Molecular Biology (ASBMB) 286 (286): 13791-13800, 2011

      27 Christopher J. Hunter, "Cytomorphology of notochordal and chondrocytic cells from the nucleus pulposus: a species comparison" Wiley 205 (205): 357-362, 2004

      28 Yue-Hui Zhang, "Cyclic stretch-induced apoptosis in rat annulus fibrosus cells is mediated in part by endoplasmic reticulum stress through nitric oxide production" Springer Nature 20 (20): 1233-1243, 2011

      29 Benjamin P. Lewis, "Conserved Seed Pairing, Often Flanked by Adenosines, Indicates that Thousands of Human Genes are MicroRNA Targets" Elsevier BV 120 (120): 15-20, 2005

      30 Xiao-Ou Zhang, "Complementary Sequence-Mediated Exon Circularization" Elsevier BV 159 (159): 134-147, 2014

      31 Agnieszka Rybak-Wolf, "Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed" Elsevier BV 58 (58): 870-885, 2015

      32 W. R. Jeck, "Circular RNAs are abundant, conserved, and associated with ALU repeats" Cold Spring Harbor Laboratory 19 (19): 141-157, 2013

      33 Qiang Liu, "Circular RNA Related to the Chondrocyte ECM Regulates MMP13 Expression by Functioning as a MiR-136 ‘Sponge’ in Human Cartilage Degradation" Springer Nature 6 (6): 2016

      34 Li, F., "Circular RNA ITCH has inhibitory effect on ESCC by suppressing the Wnt/beta-catenin pathway" 6 : 6001-6013, 2015

      35 Ghosal, S, "Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits" 4 : 283-, 2013

      36 Julia Salzman, "Cell-Type Specific Features of Circular RNA Expression" Public Library of Science (PLoS) 9 (9): e1003777-, 2013

      37 SZ. Wang, "Cell and molecular biology of intervertebral disc degeneration: current understanding and implications for potential therapeutic strategies" Wiley 47 (47): 381-390, 2014

      38 Yaping Li, "Cancer driver candidate genes AVL9, DENND5A and NUPL1 contribute to MDCK cystogenesis" Impact Journals, LLC 1 : 854-, 2014

      39 Sun, F., "Animal models of disc degeneration and major genetic strategies" 16 : E267-E275, 2013

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2009-09-21 학회명변경 한글명 : 대한생화학ㆍ분자생물학회 -> 생화학분자생물학회
      영문명 : Korean Society Of Medical Biochemistry And Molecular Biology -> Korean Society Of Biochemistry And Molecular Biology
      KCI등재
      2008-01-01 평가 SCI 등재 (등재유지) KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2004-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2001-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1998-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 3.74 0.23 2.56
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      1.82 1.45 0.555 0.01
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