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      A Comparative Analysis of Monofunctional Biosynthetic Peptidoglycan Transglycosylase (MBPT) from Pathogenic and Non-pathogenic Bacteria

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      https://www.riss.kr/link?id=A104426348

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      다국어 초록 (Multilingual Abstract)

      Monofunctional biosynthetic peptidoglycan transglycosylase (MBPT) catalyzes the formation of the glycan chain in bacterial cell walls from peptidoglycan subunits: N-acetylglucosamine (NAG) and acetylmuramic acid (NAM). Bifunctional glycosyltransferase...

      Monofunctional biosynthetic peptidoglycan transglycosylase (MBPT) catalyzes the formation of the glycan chain in bacterial cell walls from peptidoglycan subunits: N-acetylglucosamine (NAG) and acetylmuramic acid (NAM). Bifunctional glycosyltransferases such as the penicillin binding protein (PBP) have peptidoglycan glycosyltransferase (PGT) on their C terminal end which links together the peptidoglycan subunits while transpeptidase (TP) on the N terminal end cross-links the peptide moieties on the NAM monosaccharide of the peptide subunits to create the bacterial cell wall. The singular function of MBPT resembles the C terminal end of PBP as it too contains and utilizes a similar PGT domain. In this article we analyzed the infectious and non infectious protein sequences of MBPT from 31 different strains of bacteria using a variety of bioinformatic tools. Motif analysis, dot-plot comparison, and phylogenetic analysis identified a number of significant differences between infectious and non-infectious protein sequences.
      In this paper we have made an attempt to explain, analyze and discuss these differences from an evolutionary perspective. The results of our sequence analysis may open the door for utilizing MBPT as a new target to fight a variety of infectious bacteria.

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      참고문헌 (Reference)

      1 Schierack, P., "Virulence factor gene profiles of Escherichia coli isolates from clinically healthy pigs" 72 : 6680-6686, 2006

      2 Yang, J., "VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics" 36 : D539-D542, 2008

      3 Sauvage, E., "The penicillin-binding proteins: structure and role in peptidoglycan biosynthesis" 32 : 234-258, 2008

      4 Di Berardino, M., "The monofunctional glycosytransferase of Escherichia coli is a member of a new class of peptidoglycan-synthesising enzymes" 392 : 184-188, 1996

      5 Thompson, J., "The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools" 25 : 4876-4882, 1997

      6 Page, R., "TREEVIEW: An application to display phylogenetic trees on personal computers" 12 : 357-358, 1996

      7 Schmidt, H., "Pathogenicity islands in bacterial pathogenesis" 17 : 14-56, 2004

      8 Felsenstein, J., "PHYLIP Phylogeny Inference Package" 5 : 164-166, 1989

      9 Goffin, C., "Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs" 62 : 1079-1093, 1998

      10 Spratt, B.G., "Monofunctional biosynthetic peptidoglycan transglycosylases" 19 : 639-640, 1996

      1 Schierack, P., "Virulence factor gene profiles of Escherichia coli isolates from clinically healthy pigs" 72 : 6680-6686, 2006

      2 Yang, J., "VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics" 36 : D539-D542, 2008

      3 Sauvage, E., "The penicillin-binding proteins: structure and role in peptidoglycan biosynthesis" 32 : 234-258, 2008

      4 Di Berardino, M., "The monofunctional glycosytransferase of Escherichia coli is a member of a new class of peptidoglycan-synthesising enzymes" 392 : 184-188, 1996

      5 Thompson, J., "The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools" 25 : 4876-4882, 1997

      6 Page, R., "TREEVIEW: An application to display phylogenetic trees on personal computers" 12 : 357-358, 1996

      7 Schmidt, H., "Pathogenicity islands in bacterial pathogenesis" 17 : 14-56, 2004

      8 Felsenstein, J., "PHYLIP Phylogeny Inference Package" 5 : 164-166, 1989

      9 Goffin, C., "Multimodular penicillin-binding proteins: an enigmatic family of orthologs and paralogs" 62 : 1079-1093, 1998

      10 Spratt, B.G., "Monofunctional biosynthetic peptidoglycan transglycosylases" 19 : 639-640, 1996

      11 Bailey, T.L., "MEME: discovering and analyzing DNA and protein sequence motifs" 34 : W369-W373, 2006

      12 Terrak, M., "Importance of the conserved residues in the peptidoglycan glycosyltransferase module of the class A penicillin-binding protein 1b of Escherichia coli" 283 : 28464-28470, 2008

      13 Rice, P., "Emboss: the European Molecular Open Software Suite" 16 : 276-277, 2000

      14 Landes, C., "Dot-Plot comparison by multivariate analysis (DOCMA): A tool for classifying protein sequences" 9 : 191-196, 1998

      15 Yuan, Y., "Crystal structure of a peptidoglycan glycosyltransferase suggests a model for processive glycan chain synthesis" 104 : 5348-5353, 2007

      16 Maurelli, A., "Black holes, antivirulence genes, and gene inactivation in the evolution of bacterial pathogens" 267 : 1-8, 2006

      17 Wagner, P., "Bacteriophage control of bacterial virulence" 70 : 3985-3993, 2002

      18 Barrett, D., "Analysis of glycan polymers produced by peptidoglycan glycosyltransferases" 282 : 31964-31971, 2007

      19 Paik, J., "A putative monofunctional glycosyltransferase is expressed in Ralstonia eutropha" 179 : 4061-4065, 1997

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2020 평가예정 신규평가 신청대상 (신규평가)
      2019-12-01 평가 등재후보 탈락 (계속평가)
      2018-12-01 평가 등재후보로 하락 (계속평가) KCI등재후보
      2015-01-01 평가 등재학술지 선정 (계속평가) KCI등재
      2013-01-01 평가 등재후보 1차 FAIL (등재후보1차) KCI등재후보
      2012-01-01 평가 등재후보학술지 유지 (기타) KCI등재후보
      2011-01-01 평가 등재후보 1차 FAIL (등재후보2차) KCI등재후보
      2010-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2009-01-01 평가 등재후보학술지 유지 (등재후보2차) KCI등재후보
      2008-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2006-01-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.11 0.11 0.13
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.11 0.09 0.353 0
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