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      KCI등재 SCIE SCOPUS

      The fine-scale genetic structure and dispersal ability of the mayfly Ecdyonurus yoshidae Takahashi (Ephemeroptera: Heptageniidae) in the Sagami River system, southern Kanto Region, Japan

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      https://www.riss.kr/link?id=A108518124

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      다국어 초록 (Multilingual Abstract)

      Aquatic organisms frequently exhibit clear genetic structures over their distribution ranges. In a previous study, we showed that the mayfly Ecdyonurus yoshidae Takahashi also showed genetic delimitations in the Japanese archipelago. In this paper, we...

      Aquatic organisms frequently exhibit clear genetic structures over their distribution ranges. In a previous study, we showed that the mayfly Ecdyonurus yoshidae Takahashi also showed genetic delimitations in the Japanese archipelago. In this paper, we studied the dispersal and migration of this species using the fine-scale genetic structure and historical demographic dynamics in the Sagami River system using the DNA barcoding region mitochondrial cytochrome c oxidase subunit I gene sequence (COI). We detected two major haplogroups con structed from 44 distinct haplotypes in 226 specimens collected from 24 sampling sites. From the highest altitude of 530 m to the lowest of 7 m, the dominant haplotype was widespread throughout the rivers and the six tributaries and even spread to isolated microhabitats upstream. We did not observe genetic differentiation among the six tributaries and 24 sampling sites. Consequently, we estimated that the population occurring in the entire river system is maintained as a meta-population by suitable small-scale habitats. We found that E. yoshidae might be capable of crossing areas with unsuitable habitats, such as gorges and rapid streams. Furthermore, one haplogroup experienced population expansion—which affected the genetic structure across the Sagami River system—and another haplogroup might have migrated from an adjacent catchment.

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      참고문헌 (Reference) 논문관계도

      1 Paulose, J., "The impact of long-range dispersal on gene surfing" 11 : 7584-7593, 2020

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      7 Kanto Regional Development Bureau, "Sagami R. Kanto R.B"

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      9 Kubo, S., "Reconstruction of Paleo Sea-level and Landform Changes since the Marine Isotope Stage 5a, Using Buried Terraces in the Lower Sagami Plain, Central Japan(In Japanese)" 36 (36): 147-163, 1997

      10 Rambaut, A., "Posterior summarization in Bayesian phylogenetics using Tracer 1.7" 67 (67): 901-904, 2018

      1 Paulose, J., "The impact of long-range dispersal on gene surfing" 11 : 7584-7593, 2020

      2 Kaneko, H., "The genetic diversities and phylogenetic relationships of two genera, Ecdyonurus and Afronurus, of Heptageniidae(Ephemeroptera)in the Yaeyama Islands and Taiwan" 20 : 6-20, 2018

      3 Tajima, F., "The effect of change in population size on DNA polymorphism" 123 : 597-601, 1989

      4 Mantel, N., "The detection of disease clustering and a generalized regression approach" 27 : 209-220, 1967

      5 Fu, Y. X., "Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection" 147 : 915-925, 1997

      6 Tojo, K., "Species diversity of insects in Japan : their origins and diversification processes" 201 : 357-381, 2017

      7 Kanto Regional Development Bureau, "Sagami R. Kanto R.B"

      8 Papadopoulou, A., "Revisiting the insect mitochondrial molecular clock : the mid-Aegean trench calibration" 27 : 1659-1672, 2010

      9 Kubo, S., "Reconstruction of Paleo Sea-level and Landform Changes since the Marine Isotope Stage 5a, Using Buried Terraces in the Lower Sagami Plain, Central Japan(In Japanese)" 36 (36): 147-163, 1997

      10 Rambaut, A., "Posterior summarization in Bayesian phylogenetics using Tracer 1.7" 67 (67): 901-904, 2018

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      16 Osozawa, S., "Palaeogeographic reconstruction of the 1.55 Ma synchronous isolation of the Ryukyu Islands, Japan, and Taiwan and inflow of the Kuroshio warm current" 54 (54): 1369-1388, 2012

      17 Kanagawa prefectural Government, "Overview of the basin of the Sagami River"

      18 Kanagawa Prefectural Government, "Overview of the Sagami River and Nakatsu River"

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      22 Kaneko Hiroaki ; Ishiwata Shin‐ichi ; Bae Yeon Jae ; Takamura‐Enya Takeji, "Genetic characteristics and phylogeography of the habitat generalist mayfly Ecdyonurus yoshidae (Ephemeroptera: Heptageniidae) in the Japanese archipelago" 한국곤충학회 51 (51): 238-250, 2021

      23 Schneider, S., "Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates vary among sites : application to human mitochondrial DNA" 152 : 1079-1089, 1999

      24 Rozas, J., "DnaSP : DNA polymorphism analyses by the coalescent and other methods" 19 (19): 2496-2497, 2003

      25 Saito, R., "Complex geographic-and habitat-based niche partitioning of an East Asian habitat generalist mayfly Isonychia japonica (Ephemeroptera:Isonychiidae) with reference to differences in genetic structure" 35 : 712-723, 2016

      26 Saito, R., "Comparing spatial patterns of population density, biomass, and genetic diversity patterns of the habitat generalist mayfly Isonychia japonica Ulmer (Ephemeroptera: Isonychiidae) in the Chikuma-Shinano River basin" 35 : 724-737, 2016

      27 Hall, T. A., "BioEdit : a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT" 41 : 95-98, 1999

      28 Drummond, A. J., "Bayesian coalescent inference of past population dynamics from molecular sequences" 22 : 1185-1192, 2005

      29 Bouckaert, R., "BEAST 2.5: an advanced software platform for Bayesian evolutionary analysis" 15 : 2019

      30 Kanagawa prefectural Government, "As for class A rivers"

      31 Excoffier, L., "Arlequin suite ver. 3.5: a new series of programs to perform population genetics analyses under Linux and Windows" 10 : 564-567, 2010

      32 Ishiwata, S., "Aquatic Insects of Japan: Mannual with Key & Illustrations" Tokai University Press 47-150, 2018

      33 Takenaka, M., "Ancient origin of a dipteromimid mayfly family endemic to the Japanese Islands and its genetic differentiation across tectonic faults" 126 : 555-573, 2019

      34 Rice, W. R., "Analyzing tables of statistical tests" 43 : 223-225, 1989

      35 Excoffier, L., "Analysis of molecular variance inferred from metric distances among DNA haplotypes : application to human mitochondrial DNA restriction data" 131 : 479-491, 1992

      36 Shannon, C. E., "A mathematical theory of communication" 27 : 379-423, 1948

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