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      넙치(Paralichthys olivaceus) 장관의 배양 및 비배양 방법에 의한세균의 다양성 = Diversity of Cultured and Uncultured Bacteria in the Gut of Olive Flounder Paralichthys olivaceus

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      https://www.riss.kr/link?id=A103868992

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      다국어 초록 (Multilingual Abstract)

      We determined the optimal culture conditions for obtaining the maximum number of intestinal bacteria from the olive flounder Paralichthys olivaceus, and studied bacterial diversity using both culture-dependent and culture-independent methods. Using si...

      We determined the optimal culture conditions for obtaining the maximum number of intestinal bacteria from the olive flounder Paralichthys olivaceus, and studied bacterial diversity using both culture-dependent and culture-independent methods. Using six culture conditions, mean bacterial numbers were greater than 106 per gram of gut mucus, regardless of the medium. However, the bacterial diversity, based on colony morphology, appeared much higher on Marine agar (MA) and Zobell 2216 agar than on other media. We found eight and 17 cultured bacterial phylotypes with 99% minimum similarity in gut mucus grown on MA and tryptic soy agar, respectively. Furthermore, we used genomic DNA extracted from gut mucus to generate 78 random clones, which were grouped into 25 phylotypes. Of these, six were affiliated with Firmicutes, Actinobacteria, and Verrucomicrobia, and were not found using our culturedependent methods. Consequently, we believe that Marine agar and Zobell 2216 agar are optimal media for culturing diverse intestinal microbes; we also discovered several novel sequences not previously recognized as part of the gut microbiota of olive flounder.

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      참고문헌 (Reference)

      1 Angelakis E, "The relationship between gut microbiota and weight gain in humans" 7 : 91-109, 2012

      2 Saitou N, "The neighbor-joining method-a new method for reconstructing phylogenetic trees" 4 : 406-425, 1987

      3 Cole JR, "Ribosomal Database Project: data and tools for high throughput rRNA analysis" 42 : 633-642, 2013

      4 Olszak T, "Microbial exposure during early life has persistent effects on natural killer T cell function" 336 : 489-493, 2012

      5 Ley RE, "Microbial ecology: human gut microbes associated with obesity" 444 : 1022-1023, 2006

      6 Kim DH, "Microbial diversity of intestinal contents and mucus in rainbow trout(Oncorhynchus mykiss)" 102 : 1654-1664, 2007

      7 Kim DH, "Microbial diversity in the intestine of olive flounder (Paralichthys olivaceus)" 414 : 103-108, 2013

      8 Tamura K, "MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods" 28 : 2731-2739, 2011

      9 Martin-Antonio B, "Intestinal microbiota variation in Senegalese sole (Solea senegalensis) under different feeding regimes" 38 : 1213-1222, 2007

      10 Candela M, "Interaction of probiotic Lactobacillus and Bifidobacterium strains with human intestinal epithelial cells: adhesion properties, competition against enteropathogens and modulation of IL-8 production" 125 : 286-292, 2008

      1 Angelakis E, "The relationship between gut microbiota and weight gain in humans" 7 : 91-109, 2012

      2 Saitou N, "The neighbor-joining method-a new method for reconstructing phylogenetic trees" 4 : 406-425, 1987

      3 Cole JR, "Ribosomal Database Project: data and tools for high throughput rRNA analysis" 42 : 633-642, 2013

      4 Olszak T, "Microbial exposure during early life has persistent effects on natural killer T cell function" 336 : 489-493, 2012

      5 Ley RE, "Microbial ecology: human gut microbes associated with obesity" 444 : 1022-1023, 2006

      6 Kim DH, "Microbial diversity of intestinal contents and mucus in rainbow trout(Oncorhynchus mykiss)" 102 : 1654-1664, 2007

      7 Kim DH, "Microbial diversity in the intestine of olive flounder (Paralichthys olivaceus)" 414 : 103-108, 2013

      8 Tamura K, "MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods" 28 : 2731-2739, 2011

      9 Martin-Antonio B, "Intestinal microbiota variation in Senegalese sole (Solea senegalensis) under different feeding regimes" 38 : 1213-1222, 2007

      10 Candela M, "Interaction of probiotic Lactobacillus and Bifidobacterium strains with human intestinal epithelial cells: adhesion properties, competition against enteropathogens and modulation of IL-8 production" 125 : 286-292, 2008

      11 Sugita H, "Identification of intestinal bacteria from Japanese flounder (Paralichthys olivaceus) and their ability to digest chitin" 43 : 336-342, 2006

      12 Yatsunenko T, "Human gut microbiome viewed across age and geography" 486 : 222-227, 2012

      13 Sun Y, "Gut microbiota of fast and slow growing grouper Epinephelus coioides" 3 : 713-720, 2009

      14 Sonnenburg J L, "Glycan foraging in vivo by an intestine-adapted bacterial symbiont" 307 : 1955-1959, 2005

      15 Eckburg PB, "Diversity of the human intestinal microbial flora" 308 : 1635-1638, 2005

      16 Marchesi JR, "Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA" 64 : 795-599, 1998

      17 Wright ES, "DECIPHER, a search-based approach to chimera identification for 16S rRNA sequences" 78 : 717-725, 2012

      18 Asfie M, "Characterization of the goldfish fecal microflora by the fluorescent in situhybridization method" 69 : 21-26, 2003

      19 Gatesoupe FJ., "Bioactive foods in promoting health: probiotics and prebiotics" Academic Press 541-552, 2010

      20 Hall TA, "BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT" 41 : 95-98, 1999

      21 Fukuda S, "Bifidobacteria can protect from enteropathogenic infection through production of acetate" 469 : 543-547, 2011

      22 Han HJ, "Atypical Aeromonas salmonicida infection in the black rockfish, Sebastes schlegeli Hilgendorf, in Korea" 34 : 47-55, 2011

      23 Sugita H, "Antibacterial abilities of intestinal bacteria from larval and juvenile Japanese flounder against fish pathogens" 68 : 1004-1011, 2002

      24 Lane DJ., "16S/23S rRNA sequencing. Nucleic acid techniques in bacterial systematics" Academic Press 115-175, 1991

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      유사연구자 (20) 활용도상위20명

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2026 평가예정 재인증평가 신청대상 (재인증)
      2020-01-01 평가 등재학술지 유지 (재인증) KCI등재
      2017-01-01 평가 등재학술지 유지 (계속평가) KCI등재
      2014-08-06 학술지명변경 외국어명 : Korean Journal of Fisheries and Aquatic Sciences -> Korean Journal of Fisheries and Aquatic Sciences KCI등재
      2013-01-01 평가 등재학술지 유지 (계속평가) KCI등재
      2010-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2009-09-04 학회명변경 한글명 : 한국수산학회 -> 한국수산과학회
      영문명 : The Korean Fisheries Society -> The Korean Society of Fisheries and Aquatic Science
      KCI등재
      2009-07-03 학술지명변경 한글명 : 한국수산학회지 -> 한국수산과학회지
      외국어명 : Journal of The Korean Fisheries Society -> Korean Journal of Fisheries and Aquatic Sciences
      KCI등재
      2008-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2006-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2003-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2002-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      1999-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
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      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 0.47 0.47 0.43
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.43 0.43 0.59 0.17
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