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      KCI등재 SCIE SCOPUS

      Cys-92, Cys-95, and the C-Terminal 12 Residues of the Vibrio harveyi Ferric Uptake Regulator (Fur) are Functionally Inessential

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      https://www.riss.kr/link?id=A103761281

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      다국어 초록 (Multilingual Abstract)

      Ferric uptake regulator (Fur) is a global regulator involved in multiple aspects of bacterial life. The gene encoding the Vibrio harveyi Fur (FurVh) was cloned from a pathogenic V. harveyi strain isolated from diseased fish. FurVh shares 77% overall s...

      Ferric uptake regulator (Fur) is a global regulator involved in multiple aspects of bacterial life. The gene
      encoding the Vibrio harveyi Fur (FurVh) was cloned from a pathogenic V. harveyi strain isolated from diseased
      fish. FurVh shares 77% overall sequence identity with the Escherichia coli Fur (FurEc) and could complement
      a mutant of FurEc. Like FurEc, FurVh possesses two cysteine residues at positions 92 and 95, yet
      unlike FurEc, in which these cysteine residues constitute part of the metal ion coordination site and hence
      are vital to the repressor activity, C92 and C95 of FurVh proved to be functionally inessential. Further
      study identified a Vibrio Fur signature sequence, which is preserved in all the ten Vibrio Fur proteins that
      have been discovered to date but in none of the non-vibrio Fur proteins. Site-directed and random mutation
      analyses of the signature residues, the cysteine residues, and seven highly charged amino acid residues indicated
      that D9, H32, C137, and K138 of FurVh are functionally important but D9, C137, and K138 can
      be replaced by more than one functional substitutes. Systematic deletion analysis demonstrated that the
      C-terminal 12 residues of FurVh are functionally inessential. These results (i) indicated that the activation
      mechanism, or certain aspects of which, of FurVh is possibly different from that of FurEc; and (ii) suggested
      that it is not very likely that the C-terminal 12 residues play any significant role in the activation or stability
      of FurVh; and (iii) provided insights into the potential function of the local structure involving C137 and
      K138.

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      참고문헌 (Reference)

      1 Jacquamet, L., "X-ray absorption spectroscopy of a new zinc site in the fur protein from Escherichia coli" 37 : 2564-2571, 1998

      2 Lewin, A.C., "The ferric uptake regulator of Pseudomonas aeruginosa has no essential cysteine residues and does not contain a structural zinc ion" 148 : 2449-2456, 2002

      3 Quatrini, R., "The ferric iron uptake regulator (Fur) from the extreme acidophile Acidithiobacillus ferrooxidans" 151 : 2005-2015, 2005

      4 Lee, J.W, "The PerR transcription factor senses H2O2 by metal-catalysed histidine oxidation" 440 : 363-367, 2006

      5 Coy, M, "Structural dynamics and functional domains of the Fur protein" 30 : 8201-8210, 1991

      6 Pecqueur, L., "Structural changes of Escherichia coli ferric uptake regulator during metal- dependent dimerization and activation explored by NMR and X-ray crystallography" 281 : 21286-21295, 2006

      7 Saito, T., "Some structural features of the iron-uptake regulation protein" 197 : 29-39, 1991

      8 Ho, S.N., "Site-directed mutagenesis by overlap extension using the polymerase chain reaction" 77 : 51-59, 1989

      9 Crosa,J.H, "Signal transduction and transcriptional and posttranscriptional control of iron-regulated genes in bacteria" 61 : 319-336, 1997

      10 Ochsner, U.A., "Role of the ferric uptake regulator of Pseudomonas aeruginosa in the regulation of siderophores and exotoxin A expression: purification and activity on iron-regulated promoters" 177 : 7194-7201, 1995

      1 Jacquamet, L., "X-ray absorption spectroscopy of a new zinc site in the fur protein from Escherichia coli" 37 : 2564-2571, 1998

      2 Lewin, A.C., "The ferric uptake regulator of Pseudomonas aeruginosa has no essential cysteine residues and does not contain a structural zinc ion" 148 : 2449-2456, 2002

      3 Quatrini, R., "The ferric iron uptake regulator (Fur) from the extreme acidophile Acidithiobacillus ferrooxidans" 151 : 2005-2015, 2005

      4 Lee, J.W, "The PerR transcription factor senses H2O2 by metal-catalysed histidine oxidation" 440 : 363-367, 2006

      5 Coy, M, "Structural dynamics and functional domains of the Fur protein" 30 : 8201-8210, 1991

      6 Pecqueur, L., "Structural changes of Escherichia coli ferric uptake regulator during metal- dependent dimerization and activation explored by NMR and X-ray crystallography" 281 : 21286-21295, 2006

      7 Saito, T., "Some structural features of the iron-uptake regulation protein" 197 : 29-39, 1991

      8 Ho, S.N., "Site-directed mutagenesis by overlap extension using the polymerase chain reaction" 77 : 51-59, 1989

      9 Crosa,J.H, "Signal transduction and transcriptional and posttranscriptional control of iron-regulated genes in bacteria" 61 : 319-336, 1997

      10 Ochsner, U.A., "Role of the ferric uptake regulator of Pseudomonas aeruginosa in the regulation of siderophores and exotoxin A expression: purification and activity on iron-regulated promoters" 177 : 7194-7201, 1995

      11 Ahmad, R., "Prediction and experimental testing of ferric uptake regulator regulons in Vibrios" 10 : 1159-, 2008

      12 Wang, F., "Molecular analysis of the fur (ferric uptake regulator) gene of a pathogenic Edwardsiella tarda strain" 46 : 350-355, 2008

      13 Wang, Q., "Isolation, sequencing and characterization of cluster genes involved in the biosynthesis and utilization of the siderophore of marine fish pathogen Vibrio alginolyticus" 188 : 433-439, 2007

      14 Sun, L., "Isolation and characterization of iron-independent positive dominant mutants of Diphtheria toxin repressor, DtxR" 95 : 14985-14990, 1998

      15 Hamed, M.Y, "Iron(II) triggered conformational changes in Escherichia coli fur upon DNA binding: a study using molecular modeling" 25 : 234-246, 2006

      16 Ratledge, C, "Iron metabolism in pathogenic bacteria" 54 : 881-941, 2000

      17 Hantke,K, "Iron and metal regulation in bacteria" 4 : 172-177, 2001

      18 Martin, P., "Involvement of genes of genome maintenance in the regulation of phase variation frequencies in Neisseria meningitides" 150 : 3001-3012, 2004

      19 Gonzalez De Peredo, A., "Identification of the two zinc-bound cysteines in the ferric uptake regulation protein from Escherichia coli: chemical modification and mass spectrometry analysis" 38 : 582-589, 1999

      20 Funahashi, T., "Identification and characterization of pvuA, a gene encoding the ferric vibrioferrin receptor protein in Vibrio parahaemolyticus" 184 : 936-946, 2002

      21 Heidrich, C., "Identification and analysis of a gene encoding a Fur-like protein of Staphylococcus epidermis" 140 : 253-259, 1996

      22 Love, J.F., "Genetic and biophysical studies of diphtheria toxin repressor (DtxR) and the hyperactive mutant DtxR(E175K) support a multistep model of activation" 101 : 2506-2511, 2004

      23 Stojiljkovic, I, "Functional domains of the Escherichia coli ferric uptake regulator protein (Fur)" 247 : 199-205, 1995

      24 Barton, H.A., "Ferric uptake regulator mutants of Pseudomonas aeruginosa with distinct alterations in the iron-dependent repression of exotoxin A and siderophores in aerobic and microaerobic environments" 21 : 1001-1017, 1996

      25 Bagg, A, "Ferric uptake regulation protein acts as a repressor, employing iron (II) as a cofactor to bind the operator of an iron transport operon in Escherichia coli" 26 : 5471-5477, 1987

      26 Zhang, W, "Cloning, characterization and molecular application of a beta-agarase gene from Vibrio sp" 73 : 2825-2831, 2007

      27 Colquhoun, D.J, "Cloning, characterisation and phylogenetic analysis of the fur gene in Vibrio salmonicida and Vibrio logei" 296 : 213-220, 2002

      28 Colquhoun, D.J, "Cloning, characterisation and phylogenetic analysis of the fur gene in Vibrio salmonicida and Vibrio logei" 296 : 213-220, 2002

      29 Liu, Q., "Characterization of the Vibrio alginolyticus fur gene and localization of essential amino acid sites in fur by site-directed mutagenesis" 13 : 15-21, 2007

      30 Zheleznova, E.E., "Characterization of the DNA-and metal-binding properties of Vibrio anguillarum fur reveals conservation of a structural Zn 2+ ion.J.Bacteriol.182,6264-6267" 182 : 6264-6267, 2000

      31 Thompson, F.L., "Biodiversity of vibrios. Microbiol" 68 : 403-431, 2004

      32 Pohl, E., "Architecture of a protein central to iron homeostasis: crystal structure and spectroscopic analysis of the ferric uptake regulator" 47 : 903-915, 2003

      33 Miller,J.H, "A Short Course in Bacterial Genetics" Cold Spring Harbor, Cold Spring Harbor Laboratory 1992

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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 1.76 0.2 1.22
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.91 0.73 0.399 0.07
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