RISS 학술연구정보서비스

검색

인기 검색어

    다국어 입력

    http://chineseinput.net/에서 pinyin(병음)방식으로 중국어를 변환할 수 있습니다.

    변환된 중국어를 복사하여 사용하시면 됩니다.

    예시)
    • 中文 을 입력하시려면 zhongwen을 입력하시고 space를누르시면됩니다.
    • 北京 을 입력하시려면 beijing을 입력하시고 space를 누르시면 됩니다.
    닫기
    KCI등재 SCOPUS SCIE

    Transcription Profiling of Laser Microdissected Microsporocytes in an Arabidopsis Mutant (Atmcc1) with Enhanced Histone Acetylation

    한글로보기

    https://www.riss.kr/link?id=A104509408

    • 0

      상세조회
    • 0

      다운로드
    서지정보 열기
    • 내보내기
    • 내책장담기
    • 공유하기
    • 오류접수

    부가정보

    다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

    In this work, pollen mother cells (PMCs) isolated in Arabidopsis thaliana by laser-capture microdissection (LCM) were subjected to transcription profiling by microarray (LMM). PMCs covering all meiotic stages, from leptotene to tetrad, were collected in an Atmcc1 characterized by overexpression of a GCN5-like histone acetylase (AtMCC1).
    A total of 150 genes showed differential expression in Atmcc1PMCs as compared to the wild type. Histone hyperacetylation affected the transcription of genes belonging to categories such as the meiotic and mitotic cycle, the ubiquitinproteasome-system, and the chromatin structure. We also discuss the putative role of ASK1 and RAD51C upregulation in the meiotic defects observed in Atmcc1. PMCLMM experiments allowed identification of candidate AtMCC1 targets with known and potential function in meiosis, providing data for further investigation on plant meiosis.
    번역하기

    In this work, pollen mother cells (PMCs) isolated in Arabidopsis thaliana by laser-capture microdissection (LCM) were subjected to transcription profiling by microarray (LMM). PMCs covering all meiotic stages, from leptotene to tetrad, were collected ...

    In this work, pollen mother cells (PMCs) isolated in Arabidopsis thaliana by laser-capture microdissection (LCM) were subjected to transcription profiling by microarray (LMM). PMCs covering all meiotic stages, from leptotene to tetrad, were collected in an Atmcc1 characterized by overexpression of a GCN5-like histone acetylase (AtMCC1).
    A total of 150 genes showed differential expression in Atmcc1PMCs as compared to the wild type. Histone hyperacetylation affected the transcription of genes belonging to categories such as the meiotic and mitotic cycle, the ubiquitinproteasome-system, and the chromatin structure. We also discuss the putative role of ASK1 and RAD51C upregulation in the meiotic defects observed in Atmcc1. PMCLMM experiments allowed identification of candidate AtMCC1 targets with known and potential function in meiosis, providing data for further investigation on plant meiosis.

    더보기

    참고문헌 (Reference)

    1 Selker EU, "Trichostatin A causes selective loss of DNA methylation in Neurospora" 95 : 9430-9435, 1998

    2 Jenuwein T, "Translating the histone code" 293 : 1074-1080, 2001

    3 Yang H, "The transcriptome landscape of Arabidopsis male meiocytes from high-throughput sequencing: the complexity and evolution of the meiotic process" 65 : 503-516, 2011

    4 Merker JD, "The histone methylase Set2p and the histone deacetylase Rpd3p repress meiotic recombination at the HIS4 meiotic recombination hotspot in Saccharomyces cerevisiae" 7 : 1298-1308, 2008

    5 Moffatt BA, "The adenine phosphoribosyltransferase-encoding gene of Arabidopsis thaliana" 143 : 211-216, 1994

    6 Latrasse D, "The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis" 8 : 121-, 2008

    7 Li W, "The AtRAD51C gene is required for normal meioticchromosome synapsis and double-stranded break repair inArabidopsis" 138 : 65-976, 2005

    8 Yang X, "The Arabidopsis SKP1 homolog ASK1 controls meiotic chromosome remodeling and release of chromatin from the nuclear membrane and nucleolus" 119 : 3754-3763, 2006

    9 Wang Y, "The ARABIDOPSIS SKP1-LIKE1 (ASK1) protein acts predominately from leptotene to pachytene and represses homologous recombination in male meiosis" 223 : 613-617, 2006

    10 Saeed AI, "TM4 microarray software suite" 411 : 134-193, 2006

    1 Selker EU, "Trichostatin A causes selective loss of DNA methylation in Neurospora" 95 : 9430-9435, 1998

    2 Jenuwein T, "Translating the histone code" 293 : 1074-1080, 2001

    3 Yang H, "The transcriptome landscape of Arabidopsis male meiocytes from high-throughput sequencing: the complexity and evolution of the meiotic process" 65 : 503-516, 2011

    4 Merker JD, "The histone methylase Set2p and the histone deacetylase Rpd3p repress meiotic recombination at the HIS4 meiotic recombination hotspot in Saccharomyces cerevisiae" 7 : 1298-1308, 2008

    5 Moffatt BA, "The adenine phosphoribosyltransferase-encoding gene of Arabidopsis thaliana" 143 : 211-216, 1994

    6 Latrasse D, "The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis" 8 : 121-, 2008

    7 Li W, "The AtRAD51C gene is required for normal meioticchromosome synapsis and double-stranded break repair inArabidopsis" 138 : 65-976, 2005

    8 Yang X, "The Arabidopsis SKP1 homolog ASK1 controls meiotic chromosome remodeling and release of chromatin from the nuclear membrane and nucleolus" 119 : 3754-3763, 2006

    9 Wang Y, "The ARABIDOPSIS SKP1-LIKE1 (ASK1) protein acts predominately from leptotene to pachytene and represses homologous recombination in male meiosis" 223 : 613-617, 2006

    10 Saeed AI, "TM4 microarray software suite" 411 : 134-193, 2006

    11 Waterborg JH, "Sequence analysis of acetylation and methylation in two histone H3 variants of alfalfa" 265 : 17157-17161, 1990

    12 Suwabe K, "Separated Transcriptomes of Male Gametophyte and Tapetum in Rice: Validity of a Laser Microdissection (LM) Microarray" 49 : 1407-1416, 2008

    13 Perrella G, "Screening for mutations affecting sexual reproduction after activation tagging in Arabidopsis thaliana" 47 : 109-111, 2006

    14 Tian L, "Reversible histone acetylation and deacetylation mediategenome-wide, promoter-dependent and locus-specific changesin gene expression during plant development" 169 : 337-345, 2005

    15 Sharan SK, "Resolving RAD51C function in late stages of homologous recombination" 2 : 15-, 2007

    16 Kugou K, "Rec8 guides canonical Spo11 distribution along yeast meiotic chromosomes" 20 : 3064-3076, 2009

    17 Yamashita K, "Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double strand breaks during meiosis" 101 : 11380-11385, 2004

    18 Huang J, "RAD18 transmits DNA damage signaling to elicit homologous recombination repair" 11 : 592-603, 2009

    19 Krishnamoorthy T, "Phosphorylation of histone H4 Ser1 regulates sporulation in yeast and is conserved in fly and mouse spermatogenesis" 20 : 2580-2592, 2006

    20 Baudat F, "PRDM9 is a Major Determinant of Meiotic Recombination Hotspots in Humans and Mice" 327 : 836-840, 2010

    21 Ma H, "Molecular genetic analyses of microsporogenesis and microgametogenesis in flowering plants" 56 : 393-434, 2005

    22 Yanowitz J, "Meiosis: making a break for it" 22 : 744-751, 2010

    23 Chen C, "Meiosis-specific gene discovery in plants: RNA-Seq applied to isolated Arabidopsis male meiocytes" 10 : 280-317, 2010

    24 Godthelp BC, "Mammalian Rad51C contributes to DNA cross-link resistance, sister chromatid cohesion and genomic stability" 30 : 2172-2182, 2002

    25 Mieczkowski PA, "Loss of a histone deacetylase dramatically alters the genomic distribution of Spo11p-catalyzed DNA breaks in Saccharomyces cerevisiae" 104 : 3955-3960, 2007

    26 Nakazono M, "Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: identification of genes expressed differentially in epidermal cells or vascular tissues of maize" 15 : 583-596, 2003

    27 Nelson T, "Laser microdissection of plant tissue: what you see is what you get" 57 : 181-201, 2006

    28 Cai S, "Laser capture microdissection of plant cells from tape-transferred paraffin sections promotes recovery of structurally intact RNA for global gene profiling" 48 : 628-637, 2006

    29 Kerk NM, "Laser capture microdissection of cells from plant tissues" 132 : 27-35, 2003

    30 Earley KW, "In vitro specificities of Arabidopsis co-activator histoneacetyltransferases: implications for histone hyperacetylation ingene activation" 52 : 615-626, 2007

    31 Deal RB, "Histone variants and modifications in plant gene regulation" 14 : 116-122, 2011

    32 Gu L, "Histone modifications during mammalian oocyte maturation: Dynamics, regulation and functions" 9 : 9-, 2010

    33 Perrella G, "Histone hyperacetylation affects meiotic recombination and chromosome segregation in Arabidopsis" 62 : 796-806, 2010

    34 Hollender C, "Histone deacetylase genes in Arabidopsis development" 50 : 875-885, 2008

    35 Ahmad K, "Histone H3 variants specify modes of chromatin assembly" 9 : 16477-16484, 2002

    36 Hans F, "Histone H3 phosphorylation and cell division" 20 : 3021-3027, 2001

    37 Borde V, "Histone H3 lysine 4 trimethylation marks meiotic recombination initiation sites" 28 : 99-111, 2009

    38 Probst AV, "Heterochromatin establishment in the context of genome-wide epigenetic reprogramming" 27 : 177-185, 2011

    39 Tang X, "Global Gene Profiling of Laser-Captured Pollen Mother Cells Indicates Molecular Pathways and Gene Subfamilies Involved in Rice Meiosis" 154 : 1855-1870, 2010

    40 Deal RB, "Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones" 328 : 1161-1164, 2010

    41 Mito Y, "Genome-scale profiling of histone H3.3 replacement patterns" 37 : 1090-1097, 2005

    42 Benhamed M, "Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5" 56 : 493-504, 2008

    43 Tian L, "Genetic control of developmental changes induced by disruption of Arabidopsis histone deacetylase 1 (AtHD1) expression" 165 : 399-409, 2003

    44 Ishitani M, "Genetic analysis of osmotic and cold stress signal transduction in Arabidopsis: interactions and convergence of abscisic acid-dependent and abscisic acid-independent pathways" 9 : 1935-1949, 1997

    45 Libeau P, "Gene expression profiling of Arabidopsis meiocytes" 13 : 784-793, 2011

    46 Burgess SM, "GCN5-dependent histone H3 acetylation and RPD3-dependent histone H4 deacetylation have distinct, opposing effects on IME2 transcription, during meiosis and during vegetative growth, in budding yeast" 96 : 6835-6840, 1999

    47 Wu K, "Functional analysis of HD2 histone deacetylase homologues in Arabidopsis thaliana" 22 : 19-27, 2000

    48 Clayton AL, "Enhanced Histone Acetylation Review and Transcription: A Dynamic Perspective" 23 : 289-296, 2006

    49 Dobosy JR, "Emerging connections between DNA methylation and histone acetylation" 58 : 721-727, 2001

    50 Smyth DR, "Early flower development in Arabidopsis" 8 : 755-767, 1990

    51 Buard J, "Distinct histone modifications define initiation and repair of meiotic recombination in the mouse" 28 : 2616-2624, 2009

    52 Vlachonasios KE, "Disruption mutations of ADA2b and GCN5 transcriptional adaptor genes dramatically affect Arabidopsis growth, development, and gene expression" 15 : 626-638, 2003

    53 Fuks F, "DNA methylation and histone modifications: teaming up to silence genes" 15 : 490-495, 2005

    54 Angus-Hill ML, "Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily" 294 : 1311-1325, 1999

    55 Asano T, "Construction of a specialized cDNA library from plant cells isolated by laser capture microdissection: toward comprehensive analysis of the genes expressed in the rice phloem" 32 : 401-408, 2002

    56 Yi H, "Constitutive expression exposes functional redundancy between the Arabidopsis histone H2A gene HTA1 and other H2A gene family members" 18 : 1575-1589, 2006

    57 Turner BM, "Cellular memory and the histone code" 111 : 285-291, 2002

    58 Ohtsu K, "Cell typespecific gene expression profiling in plants by using a combination of laser microdissection and high-throughput technologies" 48 : 3-7, 2007

    59 Miller CP, "Caspase-8 dependent histone acetylation by a novelproteasome inhibitor, NPI-0052: a mechanism for synergy inleukemia cells" 113 : 4289-4299, 2009

    60 Koiwa H, "C-terminal domain phosphatase-like family members (AtCPLs) differentially regulate Arabidopsis thaliana abiotic stress signaling, growth, and development" 99 : 10893-10898, 2002

    61 Day RC, "Be more specific! Laser-assisted microdissection of plant cells" 10 : 397-406, 2005

    62 Klimyuk VI, "AtDMC1, the Arabidopsis homologue of the yeast DMC1 gene: characterization, transposon-induced allelic variation and meiosis-associated expression" 11 : 1-14, 1997

    63 Bertrand C, "Arabidopsis histone acetyltransferase AtGCN5 regulatesthe floral meristem activity through the WUSCHEL/AGAMOUSpathway" 278 : 28246-28251, 2003

    64 Sanders PM, "Anther developmental defects in Arabidopsis thaliana male-sterile mutants" 11 : 297-322, 1999

    65 Pandey R, "Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes" 30 : 5036-5055, 2002

    66 Bhat RA, "Alteration of GCN5 levels in maize reveals dynamic responses to manipulating histone acetylation" 33 : 455-469, 2003

    67 Zhao D, "ASK1, a SKP1 homolog, is required for nuclear reorganization, presynaptic homolog juxtaposition and the proper distribution of cohesin during meiosis in Arabidopsis" 62 : 99-110, 2006

    68 Jirawatnotai S, "A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers" 474 : 230-234, 2011

    더보기

    동일학술지(권/호) 다른 논문

    동일학술지 더보기

    더보기

    분석정보

    View

    상세정보조회

    0

    Usage

    원문다운로드

    0

    대출신청

    0

    복사신청

    0

    EDDS신청

    0

    동일 주제 내 활용도 TOP

    더보기

    주제

    연도별 연구동향

    연도별 활용동향

    연관논문

    연구자 네트워크맵

    공동연구자 (7)

    유사연구자 (20) 활용도상위20명

    인용정보 인용지수 설명보기

    학술지 이력

    학술지 이력
    연월일 이력구분 이력상세 등재구분
    2024 평가 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
    2021-01-01 등재 등재학술지 선정 (해외등재 학술지 평가) KCI등재
    2020-12-01 등재 등재후보로 하락 (해외등재 학술지 평가) KCI등재후보
    2011-01-01 등재 등재학술지 유지 (등재유지) KCI등재
    2009-01-01 등재 등재학술지 유지 (등재유지) KCI등재
    2007-01-01 등재 등재학술지 유지 (등재유지) KCI등재
    2006-07-12 학술지명변경 한글명 : 한국식물학회지 -> Journal of Plant Biology(한국식물학회지) KCI등재
    2004-01-01 등재 등재학술지 선정 (등재후보2차) KCI등재
    2003-01-01 등재 등재후보 1차 PASS (등재후보1차) KCI등재후보
    2002-01-01 등재 등재후보학술지 유지 (등재후보1차) KCI등재후보
    1999-07-01 등재 등재후보학술지 선정 (신규평가) KCI등재후보
    더보기

    학술지 인용정보

    학술지 인용정보
    기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
    2016 0 0 0
    KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
    0 0 0 0
    더보기

    이 자료와 함께 이용한 RISS 자료

    나만을 위한 추천자료

    해외이동버튼