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    Generation of ints14 Knockout Zebrafish using CRISPR/Cas9 for the Study of Development and Disease Mechanisms

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    https://www.riss.kr/link?id=A108907933

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    다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

    INTS14/VWA9, a component of the integrator complex subunits, plays a pivotal role in regulating the fate of numerous nascent RNAs transcribed by RNA polymerase II, particularly in the biogenesis of small nuclear RNAs and enhancer RNAs. Despite its significance, a comprehensive mutation model for developmental research has been lacking. To address this gap, we aimed to investigate the expression patterns of INTS14 during zebrafish embryonic development. We generated ints14 mutant strains using the CRISPR/Cas9 system. We validated the gRNA activity by co-injecting Cas9 protein and a single guide RNA into fertilized zebrafish eggs, subsequently confirming the presence of a 6- or 9-bp deletion in the ints14 gene. In addition, we examined the two mutant alleles through PCR analysis, T7E1 assay, TA-cloning, and sequencing. For the first time, we used the CRISPR/Cas9 system to create a model in which some sequences of the ints14 gene were removed. This breakthrough opens new avenues for in-depth exploration of the role of ints14 in animal diseases. The mutant strains generated in this study can provide a valuable resource for further investigations into the specific consequences of ints14 gene deletion during zebrafish development. This research establishes a foundation for future studies exploring the molecular mechanisms underlying the functions of ints14, its interactions with other genes or proteins, and its broader implications for biological processes.
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    INTS14/VWA9, a component of the integrator complex subunits, plays a pivotal role in regulating the fate of numerous nascent RNAs transcribed by RNA polymerase II, particularly in the biogenesis of small nuclear RNAs and enhancer RNAs. Despite its sig...

    INTS14/VWA9, a component of the integrator complex subunits, plays a pivotal role in regulating the fate of numerous nascent RNAs transcribed by RNA polymerase II, particularly in the biogenesis of small nuclear RNAs and enhancer RNAs. Despite its significance, a comprehensive mutation model for developmental research has been lacking. To address this gap, we aimed to investigate the expression patterns of INTS14 during zebrafish embryonic development. We generated ints14 mutant strains using the CRISPR/Cas9 system. We validated the gRNA activity by co-injecting Cas9 protein and a single guide RNA into fertilized zebrafish eggs, subsequently confirming the presence of a 6- or 9-bp deletion in the ints14 gene. In addition, we examined the two mutant alleles through PCR analysis, T7E1 assay, TA-cloning, and sequencing. For the first time, we used the CRISPR/Cas9 system to create a model in which some sequences of the ints14 gene were removed. This breakthrough opens new avenues for in-depth exploration of the role of ints14 in animal diseases. The mutant strains generated in this study can provide a valuable resource for further investigations into the specific consequences of ints14 gene deletion during zebrafish development. This research establishes a foundation for future studies exploring the molecular mechanisms underlying the functions of ints14, its interactions with other genes or proteins, and its broader implications for biological processes.

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    참고문헌 (Reference)

    1 Mendoza-Figueroa MS, "The integrator complex in transcription and development" 45 : 923-934, 2020

    2 Ansai S, "Targeted mutagenesis using CRISPR/Cas system in medaka" 3 : 362-371, 2014

    3 Peart N, "Non-mRNA 3′ end formation: How the other half lives" 4 : 491-506, 2013

    4 Baillat D, "Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II" 123 : 265-276, 2005

    5 Rienzo M, "Integrator complex and transcription regulation: Recent findings and pathophysiology" 1859 : 1269-1280, 2016

    6 Sabath K, "INTS10–INTS13–INTS14form a functional module of integrator that binds nucleic acids and the cleavage module" 11 : 3422-, 2020

    7 Oegema R, "Human mutations in integrator complex subunits link transcriptome integrity to brain development" 13 : e1006923-, 2017

    8 Seung-Hyun Jung ; 여상엽 ; Hyung-Seok Kim ; Jae-Ho Ryu ; Jung-Woo Gwak ; 배영기 ; 김철희, "Her4-Positive Population in the Tectum Opticum Is Proliferating Neural Precursors in the Adult Zebrafish Brain" 한국분자세포생물학회 33 (33): 627-632, 2012

    9 Welsh SA, "Genomic regulation of transcription and RNA processing by the multitasking integrator complex" 24 : 204-220, 2023

    10 Krall M, "Biallelic sequence variants in INTS1 in patients with developmental delays, cataracts, and craniofacial anomalies" 27 : 582-593, 2019

    1 Mendoza-Figueroa MS, "The integrator complex in transcription and development" 45 : 923-934, 2020

    2 Ansai S, "Targeted mutagenesis using CRISPR/Cas system in medaka" 3 : 362-371, 2014

    3 Peart N, "Non-mRNA 3′ end formation: How the other half lives" 4 : 491-506, 2013

    4 Baillat D, "Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II" 123 : 265-276, 2005

    5 Rienzo M, "Integrator complex and transcription regulation: Recent findings and pathophysiology" 1859 : 1269-1280, 2016

    6 Sabath K, "INTS10–INTS13–INTS14form a functional module of integrator that binds nucleic acids and the cleavage module" 11 : 3422-, 2020

    7 Oegema R, "Human mutations in integrator complex subunits link transcriptome integrity to brain development" 13 : e1006923-, 2017

    8 Seung-Hyun Jung ; 여상엽 ; Hyung-Seok Kim ; Jae-Ho Ryu ; Jung-Woo Gwak ; 배영기 ; 김철희, "Her4-Positive Population in the Tectum Opticum Is Proliferating Neural Precursors in the Adult Zebrafish Brain" 한국분자세포생물학회 33 (33): 627-632, 2012

    9 Welsh SA, "Genomic regulation of transcription and RNA processing by the multitasking integrator complex" 24 : 204-220, 2023

    10 Krall M, "Biallelic sequence variants in INTS1 in patients with developmental delays, cataracts, and craniofacial anomalies" 27 : 582-593, 2019

    11 Chen J, "An RNAi screen identifies additional members of the Drosophila integrator complex and a requirement for cyclin C/Cdk8 in snRNA 3′-end formation" 18 : 2148-2156, 2012

    12 Aoyama Y, "A novel method for rearing zebrafish by using freshwater rotifers (Brachionus calyciflorus)" 12 : 288-295, 2015

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