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      KCI등재 SCOPUS SCIE

      The promoter of tomato HISTIDINE DECARBOXYLASE A is fruit-specific, and its expression is stably maintained in fruits during ripening

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      https://www.riss.kr/link?id=A106063858

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      다국어 초록 (Multilingual Abstract) kakao i 다국어 번역

      Identifying novel promoters with specific temporal and spatial expression patterns is crucial for crop biotechnology. In this study, we isolated a fruit-specific promoter in tomato, HISTIDINE DECARBOXYLASE A (SlHDC-A) promoter. Through RNA-seq and RT-PCR analysis, we found that SlHDC-A was predominantly expressed in fruits and that its expression was stable in fruits during ripening. These results suggest that the promoter of SlHDC-A might have the ability to determine fruit-specific gene expression. To test this possibility, we generated transgenic tomato transformed with SlHDC-A::GUS and 35S::GUS. Unlike 35S::GUS transgenic tomato with constitutive expression in various tissues, SlHDC-A::GUS transgenic plants showed fruit-specific expression of GUS. The intensity of GUS activity in fruits of SlHDC-A::GUS transgenic plants was approximately tenfold higher than that in fruits of 35S::GUS transgenic plants. The core region responsible for its fruit-specific expression was identified by promoter deletion analyses. Removal of the − 880 to − 577 region abolished the fruit-specific expression of SlHDC-A promoter. This suggests that the − 880 to − 577 region is the core region responsible for the fruit-specific expression of SlHDC-A. This finding was further supported by analysis of chimeric fusion promoter.
      Unlike 35S minimal promoter which had no activity to express GUS, the chimeric fusion promoter of the core region and 35S minimal promoter showed fruit-specific expression similar to intact SlHDC-A promoter. Collectively, these findings indicate that the promoter of SlHDC-A is fruit-specific and the − 880 to − 577 region is the core region of SlHDC-A promoter.
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      Identifying novel promoters with specific temporal and spatial expression patterns is crucial for crop biotechnology. In this study, we isolated a fruit-specific promoter in tomato, HISTIDINE DECARBOXYLASE A (SlHDC-A) promoter. Through RNA-seq and RT-...

      Identifying novel promoters with specific temporal and spatial expression patterns is crucial for crop biotechnology. In this study, we isolated a fruit-specific promoter in tomato, HISTIDINE DECARBOXYLASE A (SlHDC-A) promoter. Through RNA-seq and RT-PCR analysis, we found that SlHDC-A was predominantly expressed in fruits and that its expression was stable in fruits during ripening. These results suggest that the promoter of SlHDC-A might have the ability to determine fruit-specific gene expression. To test this possibility, we generated transgenic tomato transformed with SlHDC-A::GUS and 35S::GUS. Unlike 35S::GUS transgenic tomato with constitutive expression in various tissues, SlHDC-A::GUS transgenic plants showed fruit-specific expression of GUS. The intensity of GUS activity in fruits of SlHDC-A::GUS transgenic plants was approximately tenfold higher than that in fruits of 35S::GUS transgenic plants. The core region responsible for its fruit-specific expression was identified by promoter deletion analyses. Removal of the − 880 to − 577 region abolished the fruit-specific expression of SlHDC-A promoter. This suggests that the − 880 to − 577 region is the core region responsible for the fruit-specific expression of SlHDC-A. This finding was further supported by analysis of chimeric fusion promoter.
      Unlike 35S minimal promoter which had no activity to express GUS, the chimeric fusion promoter of the core region and 35S minimal promoter showed fruit-specific expression similar to intact SlHDC-A promoter. Collectively, these findings indicate that the promoter of SlHDC-A is fruit-specific and the − 880 to − 577 region is the core region of SlHDC-A promoter.

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      참고문헌 (Reference)

      1 Jie Ye, "Transcriptome Profiling of Tomato Fruit Development Reveals Transcription Factors Associated with Ascorbic Acid, Carotenoid and Flavonoid Biosynthesis" Public Library of Science (PLoS) 10 (10): e0130885-, 2015

      2 C. R. Bird, "The tomato polygalacturonase gene and ripening-specific expression in transgenic plants" Springer Science and Business Media LLC 11 (11): 651-662, 1988

      3 Catherine Martel, "The Tomato MADS-Box Transcription Factor RIPENING INHIBITOR Interacts with Promoters Involved in Numerous Ripening Processes in a COLORLESS NONRIPENING-Dependent Manner" American Society of Plant Biologists (ASPB) 157 (157): 1568-1579, 2011

      4 Van Haaren MJ, "Strong negative and positive regulatory elements contribute to the high-level fruit-specific expression of the tomato 2A11 gene" 17 : 615-630, 1991

      5 Pogrebnyak N, "Severe acute respiratory syndrome(SARS)S protein production in plants : development of recombinant vaccine" 102 : 9062-9067, 2005

      6 Deikman J, "Separation of cis elements responsive to ethylene, fruit development, and ripening in the 5′-flanking region of the ripening-related E8 gene" 37 : 1001-1011, 1998

      7 Pfaffl MW, "Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCR" 2002

      8 Chen C, "Potentiation of developmentally regulated plant defense response by AtWRKY18, a pathogen-induced arabidopsis transcription factor" 129 : 706-716, 2002

      9 Montgomery J, "Positive and negative regulatory regions control the spatial distribution of polygalacturonase transcription in tomato fruit pericarp" 5 : 1049-1062, 1993

      10 Facchini PJ, "Plant aromatic l-amino acid decarboxylases : evolution, biochemistry, regulation, and metabolic engineering applications" 54 : 121-138, 2000

      1 Jie Ye, "Transcriptome Profiling of Tomato Fruit Development Reveals Transcription Factors Associated with Ascorbic Acid, Carotenoid and Flavonoid Biosynthesis" Public Library of Science (PLoS) 10 (10): e0130885-, 2015

      2 C. R. Bird, "The tomato polygalacturonase gene and ripening-specific expression in transgenic plants" Springer Science and Business Media LLC 11 (11): 651-662, 1988

      3 Catherine Martel, "The Tomato MADS-Box Transcription Factor RIPENING INHIBITOR Interacts with Promoters Involved in Numerous Ripening Processes in a COLORLESS NONRIPENING-Dependent Manner" American Society of Plant Biologists (ASPB) 157 (157): 1568-1579, 2011

      4 Van Haaren MJ, "Strong negative and positive regulatory elements contribute to the high-level fruit-specific expression of the tomato 2A11 gene" 17 : 615-630, 1991

      5 Pogrebnyak N, "Severe acute respiratory syndrome(SARS)S protein production in plants : development of recombinant vaccine" 102 : 9062-9067, 2005

      6 Deikman J, "Separation of cis elements responsive to ethylene, fruit development, and ripening in the 5′-flanking region of the ripening-related E8 gene" 37 : 1001-1011, 1998

      7 Pfaffl MW, "Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCR" 2002

      8 Chen C, "Potentiation of developmentally regulated plant defense response by AtWRKY18, a pathogen-induced arabidopsis transcription factor" 129 : 706-716, 2002

      9 Montgomery J, "Positive and negative regulatory regions control the spatial distribution of polygalacturonase transcription in tomato fruit pericarp" 5 : 1049-1062, 1993

      10 Facchini PJ, "Plant aromatic l-amino acid decarboxylases : evolution, biochemistry, regulation, and metabolic engineering applications" 54 : 121-138, 2000

      11 Deikman J, "Organization of ripening and ethylene regulatory regions in a fruit-specific promoter from tomato(Lycopersicon esculentum)" 100 : 2013-2017, 1992

      12 Rosati C, "Metabolic engineering of beta-carotene and lycopene content in tomato fruit" 24 : 413-419, 2000

      13 Liu Y, "Manipulation of light signal transduction as a means of modifying fruit nutritional quality in tomato" 101 : 9897-9902, 2004

      14 Montgomery J, "Identification of an ethylene-responsive region in the promoter of a fruit ripening gene" 90 : 5939-5943, 1993

      15 Nicholass FJ, "High levels of ripening-specific reporter gene expression directed by tomato fruit polygalacturonase gene-flanking regions" 28 : 423-435, 1995

      16 Hsieh TH, "Heterology expression of the Arabidopsis C-repeat/dehydration response element binding factor 1 gene confers elevated tolerance to chilling and oxidative stresses in transgenic tomato" 129 : 1086-1094, 2002

      17 Jefferson RA, "GUS fusions : betaglucuronidase as a sensitive and versatile gene fusion marker in higher plants" 6 : 3901-3907, 1987

      18 Y. J. P. Ramirez, "Fruit-Specific Expression of the Human Immunodeficiency Virus Type 1 Tat Gene in Tomato Plants and Its Immunogenic Potential in Mice" American Society for Microbiology 14 (14): 685-692, 2007

      19 Mohammad Irfan, "Fruit Ripening Regulation of α-Mannosidase Expression by the MADS Box Transcription Factor RIPENING INHIBITOR and Ethylene" Frontiers Media SA 7 : 2016

      20 Rahul Kumar, "Evolutionary Profiling of Group II Pyridoxal-Phosphate-Dependent Decarboxylases Suggests Expansion and Functional Diversification of Histidine Decarboxylases in Tomato" Wiley 9 (9): plantgenome2015.07.0057-, 2016

      21 Xu R, "Ethylene control of E4transcription during tomato fruit ripening involves two cooperative cis elements" 31 : 1117-1127, 1996

      22 Mehta RA, "Engineered polyamine accumulation in tomato enhances phytonutrient content, juice quality, and vine life" 20 : 613-618, 2002

      23 Aarti Gupta, "Delayed ripening and improved fruit processing quality in tomato by RNAi-mediated silencing of three homologs of 1-aminopropane-1-carboxylate synthase gene" Elsevier BV 170 (170): 987-995, 2013

      24 Jafari Davod, "Constructing and transient expression of a gene cassette containing edible vaccine elements and shigellosis, anthrax and cholera recombinant antigens in tomato" Springer Science and Business Media LLC 45 (45): 2237-2246, 2018

      25 Mingchun Liu, "Comprehensive profiling of Ethylene Response Factors expression identifies ripening-associated ERF genes and their link to key regulators of fruit ripening in tomato (Solanum lycopersicum)" American Society of Plant Biologists (ASPB) 170 (170): 1732-1744, 2016

      26 Murashige T, "A revised medium for rapid growth and bioassays with tobacco tissue cultures" 15 : 473-497, 1962

      27 Leandro Hueso Estornell, "A multisite gateway-based toolkit for targeted gene expression and hairpin RNA silencing in tomato fruits" Wiley 7 (7): 298-309, 2009

      28 Picton S, "A histidine decarboxylase-like mRNA is involved in tomato fruit ripening" 23 : 627-631, 1993

      29 Van Haaren MJ, "A functional map of the fruitspecific promoter of the tomato 2A11 gene" 21 : 625-640, 1993

      30 Kasuga M, "A combination of Arabidopsis DREB1A gene and stress inducible rd29A promoter improved drought and low temperature stress tolerance in tobacco by gene transfer" 45 : 346-350, 2004

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      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      2023 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2020-01-01 평가 등재학술지 유지 (해외등재 학술지 평가) KCI등재
      2012-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      2011-01-01 평가 등재후보 1차 PASS (등재후보1차) KCI등재후보
      2009-01-01 평가 SCIE 등재 (신규평가) KCI등재후보
      2005-10-31 학회명변경 영문명 : Korea Society Of Plant Biotechnology -> Korean Society for Plant Biotechnology
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      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 1.42 0.21 0.88
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      0.71 0.59 0.264 0.12
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