Neotypification of Veronica pusanensis (Scrophulariaceae)

Jang,,Hyun-Do,Noh,,Tae-Kwon The National Institute of Biological Resources 2020 Journal of species research Vol.9 No.4

A type specimen is the specimen originally used to name a new species; thus, it is one of the most significant materials for taxonomic study. In our study on the inventory and management of endemic species in Korea, we checked the type materials for Pseudolysimachion pusanensis (Y. Lee) Y. Lee, combination name Veronica pusanensis Y. Lee, recorded as deposited at the herbaria of the Ewha Womans University and the National Institute of Biological Resources, and failed to find any specimens. Thus, we concluded that all type specimens of V. pusanensis have since been misplaced. According to articles 9.11 and 9.13 of the International Code of Nomenclature for algae, fungi, and plants, it is necessary to select a neotype if the holotype is missing and no other original material exists. Therefore, we designate the neotype maintained in the herbarium of the National Institute of Biological Resources of the Republic of Korea.

Correction of the holotype citations of three vascular plants at the herbarium of the National Institute of Biological Resources, Korea

Jang,,Hyun-Do,Oh,,Hyun-Kyung,Hyun,,Chang-Woo,Nam,,Gi-Heum The National Institute of Biological Resources 2020 Journal of species research Vol.9 No.3

A holotype is an element to which the name of a taxon is permanently attached and is key material that facilitates taxonomic research. However, type citation or designation errors due to typographical errors or inadvertent mistakes often exist. When reviewing recently published literature for the type specimens of vascular plants in the herbarium of the National Institute of Biological Resources, we observed that three species, Isoetes laosiensis, Isoetes coreana, and Huperzia jejuensis, had errors, and the actual holotype information and the type descriptions of the protologues did not match. The name Isoetes laosiensis had a collecting number error, while Isoetes coreana and Huperzia jejuensis had collector errors. According to Article 9.2 of the International Code of Nomenclature for algae, fungi, and plants (Shenzhen code), if a holotype designation in the protologue of the name of a taxon is found to contain errors such as collector, collecting number, and illustration errors, the errors are to be corrected. We, therefore, corrected the errors in holotypes of three species, with no alterations made to the intents of the original authors.

Database of National Species List of Korea: the taxonomical systematics platform for managing scientific names of Korean native species

Park,,Jongsun,An,,Jung-Hyun,Kim,,Yongsung,Kim,,Donghyun,Yang,,Byeong-Gug,Kim,,Taeho The National Institute of Biological Resources 2020 Journal of species research Vol.9 No.3

A scientific name is one of changeable terms in biology whenever additional research results of specific taxa is accumulated. The Database of the National Species List of Korea (DBNKo) was developed to manage taxonomic information of Korean species, designed to describe the changeable and complex taxonomical structure and information. A Korean Taxonomical Serial Number (KTSN) was assigned to each taxon, different from the normally used systems that the scientific name was considered as primary key to manage higher rank of taxa systematically. Common names were also treated with the KTSN, reflecting that common name is considered as one type of taxon. Additional taxonomic information (e.g., synonyms, original names, and references) was also added to the database. A web interface with an intuitive dashboard presenting taxonomic hierarchical structure is provided to experts and/or managers of the DBNKo. Currently, several biological databases are available in the National Institute of Biological Resources (NIBR) such as a specimen database, a digital library, a genetic information system, and the shared species data based on the DBNKo. The DBNKo started sharing species information with other institutions such as the Nakdonggang National Institute of Biological Resources. It is an ideal centralized species database to manage standardized information of Korean species.

Unrecorded species of Korean ciliates (Protozoa, Ciliophora) discovered through the project of "Discovery of Korean Indigenous Species" (2006-2010)

Park,,Mi-Hyun,Han,,Yeong-Deok,Kwon,,Choon,Bong,Lee,,Eun,Sun,Kim,,Ji,Hye,Kang,,Youn,Seung,Kim,,Se-Joo,Yang,,Hee-Min,Park,,Taeseo,Yoo,,Jung-Sun,Kil,,Hyun-Jong,Nam,,Eunjung,Shin,,Mann,Kyoon,Min,,Gi-Sik The National Institute of Biological Resources 2017 Journal of species research Vol.6 No.no.spc

In this list-format paper, we present unrecorded species of Korean ciliates (phylum Ciliophora). All species were selected from the final reports of the project: "Discovery of Korean Indigenous Species". This project has been carried out to discover and record various Korean indigenous species since 2006 and is funded by the National Institute of Biological Resources (NIBR). Among the various species, ciliates were a major taxon that was highlighted in this project as a speciose group categorized under Protozoa. This paper contains reports of 38 ciliates (8 classes, 16 orders, 23 families, and 34 genera) observed in Korea during the initial five years of the project (2006-2010).

A report of four unrecorded Proteobacteria species isolated from soil in Korea

Lee,,Ki-Eun,Kim,,Ju-Young,Jang,,Jun,Hwee,Maeng,,Soohyun,Srinivasan,,Sathiyaraj,Subramani,,Gayathri,Kim,,Myung,Kyum,Kang,,Myung-Suk The National Institute of Biological Resources 2019 Journal of species research Vol.8 No.2

In 2015 and 2017, the National Institute of Biological Resources has isolated four unrecorded prokaryotic species designated as R-1-5, R-2-13, R-2-1, and R-1-8 from the peatland soil of Yongneup. Phylogenetic analysis based on 16S rRNA gene sequence similarity determined the four strains (R-1-5, R-2-13, R-2-1, R-1-8) were most closely related to Curvibacter lanceolatus (99.93%), Massilia brevitalea (98.7%), Pseudomonas lini (99.54%), and Pseudomonas vancouverensis (99.93%), respectively. The four unrecorded strains belong to the phylum Proteobacteria, in which the genera Curvibacter and Massilia are assigned to the class Betaproteobacteria, and the genus Pseudomonas to the class Gammaproteobacteria. Since there are no publications or official reports on these four strains, these four species are new records to Korea. The strains were further characterized by Gram reaction, colony and cell morphology, basic biochemical properties, and phylogenetic position. Descriptive information of the four unrecorded species is provided.

Eight unrecorded bacterial species isolated from soil and marine sediment in Korea

Kim,,Minji,Lee,,Ki-Eun,Cha,,In-Tae,Lee,,Byoung-Hee,Park,,Soo-Je The National Institute of Biological Resources 2020 Journal of species research Vol.9 No.4

The Earth contains billions of microbial species, although the vast majority cannot be cultured in laboratories and are thus considered unidentified and uncharacterized. Extremophiles are microorganisms that thrive in extreme conditions, including temperature, salinity, and pH. Extremophilic microorganisms have provided important insights for biological, metabolic, and evolutionary studies. Between 2017 and 2019, as part of a comprehensive investigation to identify bacterial species in Korea, eight bacterial strains were isolated from marine and non-marine environments in Jeju Island. These strains were cultured under extreme salinity or pH conditions. Phylogenetic analysis using 16S ribosomal RNA(rRNA) gene sequencing indicated that all eight strains belonged to the phyla Gammaproteobacteria, Bacilli, and Alphaproteobacteria. Based on their high 16S rRNA gene sequence similarities(>98.7%) and the formation of strong monophyletic clades with their closest related species, all isolated strains were considered as an unrecorded strain, previously unidentified species. Gram stain reaction, culture conditions, colony and cell morphology, biochemical characteristics, isolation source, and National Institute of Biological Resources(NIBR) IDs are described in this article. The characterization of these unrecorded strains provides information on microorganisms living in Korea.

Recent progress in studies of the Cladocera (Crustacea: Branchiopoda) of South Korea with seven new records for the Korean Peninsula

Kotov,,Alexey,A.,Sinev,,Artem,Y.,Garibian,,Petr,G.,Neretina,,Anna,N.,Jeong,,Hyun,Gi,Lee,,Wonchoel,Chae,,Kyu-Seok,Min,,Gi-Sik The National Institute of Biological Resources 2017 Journal of species research Vol.6 No.no.spc

A study of the Cladocera (Crustacea: Branchiopoda) from the Korean Peninsula resulted in the checklist of Jeong et al. (2014). Several sampling campaigns conducted by our team since 2014, with the framework of the programs supported by the National Institute of Biological Resources (NIBR), have resulted in a considerable increase in the number of water bodies studied in South Korea. In this report, seven new records for the Korean Peninsula are provided: (1) Macrothrix vietnamensis Silva-Briano, Dieu and Dumont, 1999; (2) Disparalona chappuisi (Brehm, 1931); (3) Pleuroxus(Picripleuroxus) quasidenticulatus (Smirnov, 1996); (4) Acroperus africanus Neretina and Kotov, 2015; (5) Alona ossiani herricki Sinev, 2013; (6) Coronatella trachystriata (Chen, Zhang and Liu, 1994); (7) Leydigia louisi Jenkin, 1934. Most of these taxa belong to the southern thermophilic complex. In addition several populations of Pleuroxus (Picripleuroxus) denticulatus Birge, 1879 and Pseudochydorus globosus (Baird, 1843) were re-studied, and their presence in Korea is confirmed. Through increased collection efforts and the application of molecular methods we are confident that more new records of Korean fauna will be published in the near future.

List of beetles (Coleoptera) associated with the oyster mushroom, Pleurotus ostreatus Fr., in the Onon-Balj National Park of Mongolia

Jung,,Boo,Hee,Park,,Sun-Jae The National Institute of Biological Resources 2014 Journal of species research Vol.3 No.2

We present a list of the beetle species associated with the oyster mushroom, Pleurotus ostreatus Fr. in the birch forest of Onon-Balj National Park in Mongolia. A total of 21 species in seven families were found in this fungus, including fungivorous species: Litargus japonicus Reitter and Mycetophagus antennatus (Reitter) (Mycetophagidae), Pseudamblyopus similis (Lewis) (Erotylidae), and Lordithon sp. (Staphylinidae) etc. Both adult and larval forms are presented in the checklist along with the type of fungal association, of which approximately 52 percent are obligate mycetobionts. The main trends of the ecological and trophic specialization of the mycetophilic beetles are discussed.

Macrochelid mites(Acari: Mesostigmata) associated with dung beetles in Mount Gede-Pangrango National Park, West Java, Indonesia

Hartini,,Sri,Dwibadra,,Dhian The National Institute of Biological Resources 2017 Journal of species research Vol.6 No.2

Sixteen species of macrochelid mites were collected on the surface of scarab dung beetles in Mount Gede-Pangrango National Park, West Java, Indonesia. Of these, one species, Macrocheles gedeensis sp. nov. is described here as new to science. The other fifteen species were Holostaspella katakurai Hartini and Takaku, 2003, H. oblonga Hartini and Takaku, 2010, H. villosa Hartini and Takaku, 2010, Neopodocinum halimunense Hartini and Takaku, 2003, N. subjaspersi Hartini and Takaku, 2003, Neopodocinum sp., Macrocheles dispar (Berlese, 1910), M. entetiensis Hartini and Takaku, 2005, M. hallidayi Walter and Krantz, 1986, M. jabarensis Hartini and Takaku, 2003, M. kraepelini (Berlese, 1905), M. pumilus Hartini, Dwibadra and Takaku, 2009, M. turgoensis Hartini, Dwibadra and Takaku, 2009, M. sukabumiensis Hartini and Takaku, 2003, and M. sukaramiensis Takaku, 2001.

New data on Limoniinae and Limnophilinae crane flies (Diptera: Limoniidae) of Korea

Podenas,,Sigitas,Park,,Sun-Jae,Byun,,Hye-Woo,Kim,,A-Young,Klein,,Terry,A.,Kim,,Heung-Chul,Aukstikalniene,,Rasa The National Institute of Biological Resources 2020 Journal of species research Vol.9 No.4

This study is based on crane fly specimens collected from 1936-2019 and are in collections maintained at the United States National Museum, Smithsonian Institution, Washington DC, USA; the Snow Entomological Museum, University of Kansas, Lawrence, KS, USA; the Hungarian Natural History Museum in Budapest, Hungary, and the National Institute of Biological Resources, Incheon, South Korea. The genus Dicranophragma Osten Sacken, 1860 with two species D. (Brachylimnophila) transitorium (Alexander, 1941) and D. (Dicranophragma) melaleucum melaleucum (Alexander, 1933), is a new record for the Korean Peninsula. New findings of Dicranomyia (Erostrata) submelas Kato et al., 2018, Dicranoptycha venosa Alexander, 1924a, Austrolimnophila (Archilimnophila) subunicoides(Alexander, 1950b), A. (A.) unica (Osten Sacken, 1869), A. (Austrolimnophila) asiatica (Alexander, 1925), Conosia irrorata (Wiedemann, 1828), Eloeophila persalsa (Alexander, 1940), E. serenensis (Alexander, 1940), E. subaprilina (Alexander, 1919), E. ussuriana ussuriana (Alexander, 1933), E. yezoensis (Alexander, 1924b), Paradelphomyia chosenica Alexander, 1950b, and P. macracantha Alexander, 1957 are discussed. General information on genera and subgenera morphological characters, redescriptions of species based on Korean specimens, illustrations of both sexes, elevation range, period of activity, habitat information, general distribution, and a distribution map for the Korean Peninsula (including North Korea) are presented for each species.