벼의 종자배양에서 배의 성숙정도와 Celrie 농도가 캘러스 형성 및 식물체 재분화에 미치는 영향

권용삼,김경민,김도훈,손재근 한국생명과학회 2001 생명과학회지 Vol.11 No.4

To identify the effects embryo developmental stage and gelrite concentration on plant regeneration in seed culture of rice, mature and immature seeds of rice were cultured on the $N_{6}$ medium supplemented with2 mg/$\ell$ 2.4-D and different levels of gelrite(0.2~1.0%). The calli formed immature embryos were produced more plants than those from mature embryos. The maximum frequency of plant regeneration was achieved in the culture of the calli of immature embryos which was harvested at the 21$^{th}$ day after pollination. The plant regeneration on the medium with gelrite was more accelerate than that on the medium with agar. The highest frequency(55%) of plant regeneration was obtained from the calli transferred to the medium with 6g/$\ell$ gelrite.

벼 종자배양에서 Copper가 캘러스 형성 및 식물체 재분화에 미치는 영향

권용삼,손재근 한국식물생명공학회 2001 식물생명공학회지 Vol.28 No.4

벼의 종자배양에서 식물체 재분화 능력을 향상시키기 위하여 2 mg/L의 2,4-D와 여러 가지 농도의 copper (0~5.0mg/L)가 첨가된 MS배지에 종자배양 한 바 캘러스 생장정도는 copper 농도에 따라 다르게 나타났는데 특히, 2.5 mg/L의 copper가 첨가된 배지에서 가장 양호하였다. 그리고 캘러스 형성률과 copper 농도 간에는 유의성 있는 차이가 인정되지 않았다. 식물체 재분화 배지에 2.5 mg/L의 copper의 첨가는 Indica 품종들의 식물체 재분화 효율을 크게 향상시켰다. Copper가 첨가되지 않은 N$_{6}$배지에서 Indica 6품종의 평균재분화율은 2.4%이었으나, copper가 첨가된 배지에서 27.4%로 높게 나타났다. This study was conducted to improve the regeneration efficiency from seed-derived calli of rice by optimizing the copper concentrations in the media. Mature seeds were cultured on MS medium supplemented with copper sulphate (0 to 5.0 mg/L) and 2 mg/L 2,4-D. Callus growth was influenced by the levels of copper sulphate containing with medium, The addition of copper sulphate (2.5 mg/L) in regeneration medium enhanced dramatically the ability of plant regeneration from seed-derived calli. The mean frequency of plant regeneration of 6 indica rices was 27.4% on medium containing copper sulphate, whereas that of the cultivars on copper-free medium was 2.4%. These results suggest that copper sulphate may have an important role in improving regeneration ability of indica rices.

Genetic Assessment of Watermelon (Citrullus lanatus) Varieties Using SSR Markers Developed from Cucurbit species

권용삼,박은경,이원식,이승인,배경미,안진석,김희열 한국유전학회 2007 Genes & Genomics Vol.29 No.2

The cros-species aplication of SR markers, originally developed in melon and cucumber, was examined for watermelon (Citrullus lanatusdiversity. Eighty-two SR loci out of 200 SRs from melons and 96 SRs from the cucumber were detected in the watermelon varieties. Among the 82 primers, 15 revealed polymorphisms in 24 watermelon varieties. In adition, 12 polymorphic primer sets were selected from 52 of the SRs derived from the watermelon. A total of 72 polymorphic amplified fragments were tion content (PIC) was 0.34, ranging from 0.15 to 0.61. A total of 72 SR loci were employed to calculate Jacard’s distance coeficients for a UPGMA cluster analysis. A clustering group of varieties, based on the results of SSR analysis, was divided into 4 groups coresponding to the variety type. luation of the genetic distance of watermelon varieties.

Microsatellite 마커를 이용한 한국 보리 품종의 유전적 다양성

권용삼,홍지화,최근진 한국육종학회 2011 한국육종학회지 Vol.43 No.4

Microsatellite markers were utilized to investigate genetic diversity among 70 Korean barley varieties (Hordeum vulgare). Ninety nine microsatellite primer pairs were screened for 9 varieties. Twenty primer pairs showed highly polymorphic. The relationship between markers genotypes and 70 varieties was analyzed. A total of 124 polymorphic amplified fragments were obtained by using 20 microsatellite markers. Two to nine SSR alleles were detected for each locus with an average of 6.2 alleles per locus. Average polymorphism information content (PIC) was 0.734, ranging from 0.498 to 0.882. A total of 124 marker loci were used to calculate Jaccard’s distance coefficients for cluster analysis using UPGMA. Clustering group was divided 2 groups corresponding to 2-rowed and 6-rowed barley varieties. The phenogram was discriminated all varieties by markers genotypes. These markers may be used wide range of practical application in variety identification and genetic purity assessment of barley.

핵심 Microsatellite 마커를 이용한 한국 콩 품종에 대한 Fingerprinting 분석

권용삼,Kwon, Yong-Sham 한국식물생명공학회 2016 식물생명공학회지 Vol.43 No.4

핵심 microsatellite 마커를 활용하여 우리나라에서 품종보호출원 및 등록된 콩 148 품종에 대한 DNA 프로파일 데이터베이스를 구축한 다음 유전적 유사도 분석을 통한 품종 식별력 정도를 조사하였다. 콩 148품종을 120개의 microsatellite 마커로 검정하고 밴드의 패턴이 명확하고 다형성 정도가 높은 핵심 마커 16개의 대립유전자의 수는 6 ~ 28개로 나타났고 평균 대립유전자의 수는 12.75개였다. PIC 값은 0.753 ~ 0.951 사이에 분포하였고 평균값은 0.863으로 아주 높았다. 콩 148 품종에 대하여 Jaccard 방법에 따라 유전적 유사도를 설정한 다음 비가중 산술평균결합에 의해 집괴분석하여 계통도를 작성하였을 때, 콩의 품종 유형 및 품종 육성 계보에 따라 5개의 대그룹으로 나누어졌으며 모든 품종이 식별이 가능하였다. 본 연구에서 콩 품종식별용 핵심 microsatellite는 품종보호출원 품종의 구별성, 균일성, 안정성의 확인, 품종진 위성과 관련된 종자분쟁, 종자 순도 관리에 매우 유용하게 활용될 수 있을 것이다. Microsatellites are one of the most suitable markers for identification of variety, as they have the capability to discriminate between narrow genetic variations. The polymorphism level between 120 microsatellite primer pairs and 148 soybean varieties was investigated through the fluorescence based automatic detection system. A set of 16 primer pairs showed highly reproducible polymorphism in these varieties. A total of 204 alleles were detected using the 16 microsatellite markers. The number of alleles per locus ranged from 6 to 28, with an average of 12.75 alleles per locus. The average polymorphism information content (PIC) was 0.86, ranging from 0.75 to 0.95. The unweighted pair group method using the arithmetic averages (UPGMA) cluster analysis for 148 varieties were divided into five distinctive groups, reflecting the varietal types and pedigree information. All the varieties were perfectly discriminated by marker genotypes. These markers may be useful to complement a morphological assessment of candidate varieties in the DUS (distinctness, uniformity and stability) test, intervening of seed disputes relating to variety authentication, and testing of genetic purity in soybean varieties.

Informative SSR markers for commercial variety discrimination in watermelon (Citrullus lanatus)

권용삼,오유환,이승인,김희열,안종문,양승균,옥승한,신정섭 한국유전학회 2010 Genes & Genomics Vol.32 No.2

SSR markers were used for variety discrimination and genetic assessment in watermelon varieties. Genetic characterization of 49 watermelon varieties was investigated using 30 SSR markers developed from melon and watermelon. A total of 121 polymorphic amplified fragments were obtained by using 30 SSR markers. The average polymorphism information content (PIC) was 0.502 ranging from 0.223 to 0.800. One hundred twenty one SSR loci were used to calculate Jaccard’s distance coefficients for unweighted pair group method using the arithmetic averages (UPGMA) cluster analysis. A clustering group of varieties, based on the results of SSR analysis,were categorized into 5 major groups corresponding to morphological traits. Inheritance mode of 2 SSR markers was investigated to F1 plants and F2 populations of 2 crosses. Parental alleles were transmitted from F1 plants and F2 populations. Therefore, these marker sets may prove to be effectively applicable to genetic assessment of germplasm, genome mapping,and fingerprinting of watermelon varieties.

벼 악배양 효율의 품종간 차이와 식물체 재분화 능력의 유전

권용삼,손재근 한국식물생명공학회 2000 식물생명공학회지 Vol.27 No.3

벼 약배양에서 식물체 재분화 능력의 품종간 차이와 유전 양식에 대해 연구한 결과는 다음과 같다. ‘일미벼’ 외 46품종의 녹색체 재분화율은 자포니카형이 통일형이나 인디카형보다 높게 나타났고, 동일 품종 생태형간에도 배양 효율은 다양한 변이폭을 나타내었다. 자포니카 품종중에서 ‘일미벼’와 ‘향남벼’는 각각 19.4%와 18.1%의 높은 재분화 능력을 나타내었다. ‘밀양 23호’와 ‘추청벼’가 교배된 F$_2$집단의 녹색체 재분화율은 평균 6.6%로 나타났고 0~33.3%까지 넓은 변이폭을 가지는 연속적인 빈도 분포양상을 나타내었다. 캘러스 형성률과 식물체 재분화 능력에 대해 추정된 광의의 유전력은 각각 72.8%와 82.7%로 추정되었다. This study was carried out to identify varietal difference and the inheritance of the ability of plant regeneration in anther culture of rice. The anthers of 33 Japonica, 11 Indica/Japonica, and 3 Indica rice cultivars were culture on $N_6-Y$_1$$ medium with 1 mg/L NAA and 2 mg/L kinetin. The remarkable variability in plant regeneration were observed among the genotypes, ranging from 0.0% to 19.4% Most of Japonica rices were resulted to have better culturability than that of Indica/Japonica and Indica type cultivars. Newly developed Japonica rices, 'Ilmibyeo' and 'Hangnambyeo' showed to have regenerability with the frequency of 19.4% and 18.1% respectively. The segregation mode for callus formation and plant regenerationin anther culture of F$_2$ population of 'Milyang 23/Chucheongbyeo' showed a continuous variation. The variation of plant regeneration frequency in anther culture of F$_2$ plants ranged from 0% to 33.3% with a mean of 6.3% The broad-sense heritability estimated from the ability of plant regeneration was considerably high (82.7%).

Microsatellite 마커를 이용한 옥수수 품종 및 자식 계통에 대한 DNA Fingerprinting 분석

권용삼,Kwon, Yong-Sham 한국식물생명공학회 2016 식물생명공학회지 Vol.43 No.3

국내에서 육성된 옥수수 90 품종 및 자식 계통에 대하여 microsatellite 마커를 활용하여 DNA 프로파일 데이터베이스를 구축한 다음 공시품종에 따른 유전적 유사도 분석 및 품종식별력 검정에 대한 연구를 수행하였다. 옥수수 90품종을 100개의 microsatellite 마커로 검정하고 대립유전자의 패턴이 우수하고 다형성 정도가 높은 13개를 선정하여 분석하였을 때 대립유전자의 수는 5 ~ 24개까지 다양하게 분포하였고 평균 대립유전자의 수는 13.69개로 높았다. PIC 값의 경우도 0.716 ~ 0.942 범위에 속하였고 평균값은 0.865로 아주 높았다. 옥수수 90품종 및 계통에 대하여 UPGMA 분석에 의한 계통도를 작성하였을 때, 옥수수의 품종 유형 및 품종 육성 계보에 따라 5개의 대그룹으로 나누어졌다. 본 연구에서 구축됨 옥수수 자식계통 및 품종별 microsatellite DNA 프로파일 데이터베이스는 신품종과 기 육성된 품종과 유전적 유사도 분석이 가능하기 때문에 품종보호출원시 대조품종 선정 및 품종진위성과 관련된 종자분쟁에 매우 유용하게 활용될 수 있을 것이다. In the present study, we conducted genetic characterization of 90 commercial maize varieties and parental lines using microsatellite markers. Thirteen microsatellite markers were selected from 100 primer pairs in the maize genome data on the basis of polymorphism information contents (PIC) value and distinct amplification products. These markers detected 5 to 24 alleles, with an average of 13.69. The mean PIC value was 0.865 and ranged from 0.716 to 0.942. The unweighted pair-group method with arithmetical average (UPGMA) analysis was conducted for constructing the dendrogram using Jaccard's genetic similarity coefficient. The genetic similarity varied from 0.07 to 0.824. Thirteen microsatellite markers identified all 90 maize varieties and parental lines. The maize varieties were clustered into 5 major groups consistent with type and pedigree information. The microsatellite profile database of maize varieties could be used to select comparative varieties through genetic relationship analysis between existing varieties and candidate varieties in distinctness tests.

벼 약배양시 캘러스 형성 및 식물체 재분화 능력과 관련된 양적형질 유전자좌 ( QTL ) 분석

권용삼,김경민,조용구,은무영,손재근 한국육종학회 2000 한국육종학회지 Vol.32 No.3

Inter-simple sequence repeat (ISSR) marker를 이용한 수박의 품종간 유연관계 분석

권용삼,이원식,조일호,Kwon Yong-Sham,Lee Won-Sik,Cho Il-Ho 한국생명과학회 2006 생명과학회지 Vol.16 No.2

Inter-simple sequence repeat (ISSR) analysis were used to assess genetic diversity among 18 genotypes of watermelon (Citrullus lanatus Thunb.) including breeding lines and commercial varieties. The 21 ISSR primers selected from 100 primers were showed the amplification of 105 reproducible fragments ranging from about 200 bp to 5000 bp. A total of 58 DNA fragments were polymorphic with an average 2.7 polymorphic bands per primer. The polymorphic primers were divided into 18 anchored primers and 3 non anchored primers. All of the anchored primers were di-nucleotide repeat motif, and was more polymorphic than non anchored primers. Eighteen watermelon genotypes were classified into two large groups. Clustering was in some accordance with the division of fruit shape into 18 watermelon. Therefore, ISSR markers may be suitable for variety discrimination and for constructing a linkage map of watermelon. ISSR markers를 이용하여 수박 18품종의 유전적 유연관계를 분석하여 얻어진 결과를 요약하면 다음과 같다. 수박 18품종의 genomic DNA와 ISSR primer 100개를 PCR 반응시킨 결과 다형성을 뚜렷하게 나타내는 primer는 21개 이였으며, 이들 primer에 의해 증폭된 밴드는 105개 이였고 다형성을 보이는 밴드는 58개 였으며 증폭된 DNA 단편의 크기는 $0.2{\sim}5.0kb$ 사이에 위치하였다. 다형성을 나타낸 primer는 18개의 anchored primer와 3개의 non-anchored primer로 구분되었고 모든 anchored primer는 2개의 염기서열이 반복된 형태를 나타내었으며, non-anchored primer보다. 다형성 정도가 높게 나타났다. 수박 18품종은 유전적 유사도 값 0.42를 기준으로 할 때 18개 품종을 2개의 그룹 으로 구분할 수 있었으며, 국내에서 육성된 품종은 유전적 유사도가 아주 높은 것으로 분석 되었고, 이들 품종은 수박의 과형에 따라 유사하게 구분되었다.