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      • Unorthodox Approach to Classify EEG Signals for Upper Limb Prosthesis Application

        Nasir Rashid,Fahad Mahmood,Javaid Iqbal 제어로봇시스템학회 2018 제어로봇시스템학회 국제학술대회 논문집 Vol.2018 No.10

        Brain computer interface (BCI) is targeted for decoding the EEG (Electroencephalogram) signals that the human brain generates which are beneficial for the paraplegic patients. These EEG signals are slow cortical potentials that are directly recorded from scalp thus cortical neuronal activity is explored via non-invasive electrodes. These EEG signals are then further utilized for performing various operations which the paraplegic patients are unable to perform. This research article presents a novel architecture of classification of four finger movements (thumb movement, index finger movement, middle and index finger combined movement and fist movement) of the right hand on the basis of EEG (Electroencephalogram) data of the movements. The presented architecture utilizes Guided filter for reduction of noise (artefacts) from EEG signals alpha and beta band (8-30 Hz). As this band contains the maximum information of movement in terms of motor imagery. Rank Transform is employed as feature extraction approach for further enhancement of processed EEG signals. Two stage Logistic Regression classifier is finally employed for classification of movements using processed EEG signals. The experimental results demonstrate the accuracy, robustness and computational complexity of the proposed approach and have significant improvement as compared with recent architectures for EEG classification.

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        Connection the Rhizomicrobiome and Plant MAPK Gene Expression Response to Pathogenic Fusarium oxysporum in Wild and Cultivated Soybean

        Chang, Chunling,Xu, Shangqi,Tian, Lei,Shi, Shaohua,Nasir, Fahad,Chen, Deguo,Li, Xiujun,Tian, Chunjie The Korean Society of Plant Pathology 2019 Plant Pathology Journal Vol.35 No.6

        Little known the connections between soybeans mitogen-activated protein kinase (MAPK) gene expression and the rhizomicrobiome upon invasion of the root pathogen Fusarium oxysporum. To address this lack of knowledge, we assessed the rhizomicrobiome and root transcriptome sequencing of wild and cultivated soybean during the invasion of F. oxysporum. Results indicated F. oxysporum infection enriched Bradyrhizobium spp. and Glomus spp. and induced the expression of more MAPKs in the wild soybean than cultivated soybean. MAPK gene expression was positively correlated with Pseudomonadaceae but negatively correlated with Sphingomonadaceae and Glomeraceae in both cultivated and wild soybean. Specifically, correlation profiles revealed that Pseudomonadaceae was especially correlated with the induced expression of GmMAKKK13-2 (Glyma.14G195300) and GmMAPK3-2 (Glyma.12G073000) in wild and cultivated soybean during F. oxysporum invasion. Main fungal group Glomeraceae was positively correlated with GmMAPKKK14-1 (Glyma.18G060900) and negatively correlated with GmRaf6-4 (Glyma.02G215300) in the wild soybean response to pathogen infection; while there were positive correlations between Hypocreaceae and GmMAPK3-2 (Glyma.12G073000) and between Glomeraceae and GmRaf49-3 (Glyma.06G055300) in the wild soybean response, these correlations were strongly negative in the response of cultivated soybean to F. oxysporum. Taken together, MAPKs correlated with different rhizomicrobiomes indicating the host plant modulated by the host self-immune systems in response to F. oxysporum.

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        Connection the Rhizomicrobiome and Plant MAPK Gene Expression Response to Pathogenic Fusarium oxysporum in Wild and Cultivated Soybean

        Chunling Chang,Shangqi Xu,Lei Tian,Shaohua Shi,Fahad Nasir,Deguo Chen,Xiujun Li,Chunjie Tian 한국식물병리학회 2019 Plant Pathology Journal Vol.35 No.6

        Little known the connections between soybeans mitogen- activated protein kinase (MAPK) gene expression and the rhizomicrobiome upon invasion of the root pathogen Fusarium oxysporum. To address this lack of knowledge, we assessed the rhizomicrobiome and root transcriptome sequencing of wild and cultivated soybean during the invasion of F. oxysporum. Results indicated F. oxysporum infection enriched Bradyrhizobium spp. and Glomus spp. and induced the expression of more MAPKs in the wild soybean than cultivated soybean. MAPK gene expression was positively correlated with Pseudomonadaceae but negatively correlated with Sphingomonadaceae and Glomeraceae in both cultivated and wild soybean. Specifically, correlation profiles revealed that Pseudomonadaceae was especially correlated with the induced expression of GmMAKKK13-2 (Glyma.14G195300) and GmMAPK3-2 (Glyma.12G073000) in wild and cultivated soybean during F. oxysporum invasion. Main fungal group Glomeraceae was positively correlated with GmMAPKKK14-1 (Glyma.18G060900) and negatively correlated with GmRaf6-4 (Glyma.02G215300) in the wild soybean response to pathogen infection; while there were positive correlations between Hypocreaceae and GmMAPK3-2 (Glyma.12G073000) and between Glomeraceae and GmRaf49-3 (Glyma.06G055300) in the wild soybean response, these correlations were strongly negative in the response of cultivated soybean to F. oxysporum. Taken together, MAPKs correlated with different rhizomicrobiomes indicating the host plant modulated by the host self-immune systems in response to F. oxysporum.

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