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      KCI등재 SCIE SCOPUS

      Calcium-related genes associated with intracellular calcification of Emiliania huxleyi (Haptophyta) CCMP 371

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      https://www.riss.kr/link?id=A105378910

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      다국어 초록 (Multilingual Abstract)

      Emiliania huxleyi (a haptophyte) is the most abundant coccolithophore species that produces delicate calcite scales called coccoliths. In this study, we identified several candidate genes associated with coccolith production by comparing the transcrip...

      Emiliania huxleyi (a haptophyte) is the most abundant coccolithophore species that produces delicate calcite scales called coccoliths. In this study, we identified several candidate genes associated with coccolith production by comparing the transcriptomes of the calcifying (CCMP 371) and non-calcifying (CCMP 2090) strains of E. huxleyi. Among the candidates, genes highly expressed in CCMP 371 were identified. To confirm whether these genes are associated with calcification, we modulated coccolith production in CCMP 371 by culturing it at different calcium concentrations. At an ambient (10 mM) concentration of calcium in the growth medium, CCMP 371 sustained its calcifying ability. However, at a low (0.1 mM) concentration or absence of calcium, there was no calcite formation, demonstrating that calciumlimiting conditions negatively affect calcification. We also evaluated the expression patterns of the putative genes in cells grown at different calcium concentrations by quantitative reverse transcription polymerase chain reaction. In addition, we showed that the growth rate of cells cultured under calcium-limiting conditions does not differ from that under ambient conditions. Further studies are required to investigate the roles of the putative calcification-associated genes at the molecular level.

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      참고문헌 (Reference)

      1 Gingras, A. -C., "eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation" 68 : 913-963, 1999

      2 Quinn, P., "cDNA microarrays as a tool for identification of biomineralization proteins in the coccolithophorid Emiliania huxleyi (Haptophyta)" 72 : 5512-5526, 2006

      3 von Dassow, P., "Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell" 10 : R114-, 2009

      4 Witke, W, "The role of profilin complexes in cell motility and other cellular processes" 14 : 461-469, 2004

      5 Badger, M. R., "The role of carbonic anhydrase in photosynthesis" 45 : 369-392, 1994

      6 Revenu, C., "The co-workers of actin filaments: from cell structures to signals" 5 : 635-646, 2004

      7 Jones, P. M., "The ABC transporter structure and mechanism: perspectives on recent research" 61 : 682-699, 2004

      8 Nguyen, B., "Suppressive subtractive hybridization of and differences in gene expression content of calcifying and noncalcifying cultures of Emiliania huxleyi strain 1516" 71 : 2564-2575, 2005

      9 Herfort, L., "Structural and physiological effects of calcium and magnesium in Emiliania huxleyi (Lohmann) Hay and Mohler" 148 : 307-314, 2004

      10 Richier, S., "Response of the calcifying coccolithophore Emiliania huxleyi to low pH/high $pCO_2$: from physiology to molecular level" 158 : 551-560, 2011

      1 Gingras, A. -C., "eIF4 initiation factors: effectors of mRNA recruitment to ribosomes and regulators of translation" 68 : 913-963, 1999

      2 Quinn, P., "cDNA microarrays as a tool for identification of biomineralization proteins in the coccolithophorid Emiliania huxleyi (Haptophyta)" 72 : 5512-5526, 2006

      3 von Dassow, P., "Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell" 10 : R114-, 2009

      4 Witke, W, "The role of profilin complexes in cell motility and other cellular processes" 14 : 461-469, 2004

      5 Badger, M. R., "The role of carbonic anhydrase in photosynthesis" 45 : 369-392, 1994

      6 Revenu, C., "The co-workers of actin filaments: from cell structures to signals" 5 : 635-646, 2004

      7 Jones, P. M., "The ABC transporter structure and mechanism: perspectives on recent research" 61 : 682-699, 2004

      8 Nguyen, B., "Suppressive subtractive hybridization of and differences in gene expression content of calcifying and noncalcifying cultures of Emiliania huxleyi strain 1516" 71 : 2564-2575, 2005

      9 Herfort, L., "Structural and physiological effects of calcium and magnesium in Emiliania huxleyi (Lohmann) Hay and Mohler" 148 : 307-314, 2004

      10 Richier, S., "Response of the calcifying coccolithophore Emiliania huxleyi to low pH/high $pCO_2$: from physiology to molecular level" 158 : 551-560, 2011

      11 Sun, T., "Profilin as a regulator of the membrane-actin cytoskeleton interface in plant cells" 4 : 512-, 2013

      12 Kayano, K., "Physiological regulation of coccolith polysaccharide production by phosphate availability in the coccolithophorid Emiliania huxleyi" 50 : 1522-1531, 2009

      13 Read, B. A., "Pan genome of the phytoplankton Emiliania underpins its global distribution" 499 : 209-213, 2013

      14 Langer, G., "On the role of the cytoskeleton in coccolith morphogenesis: the effect of cytoskeleton inhibitors" 46 : 1252-1256, 2010

      15 Leonardos, N., "No mechanistic dependence of photosynthesis on calcification in the coccolithophorid Emiliania huxleyi (Haptophyta)" 45 : 1046-1051, 2009

      16 Dyhrman, S. T., "Long serial analysis of gene expression for gene discovery and transcriptome profiling in the widespread marine coccolithophore Emiliania huxleyi" 72 : 252-260, 2006

      17 Omata, T., "Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942" 96 : 13571-13576, 1999

      18 Soto, A. R., "Identification and preliminary characterization of two cDNAs encoding unique carbonic anhydrases from the marine alga Emiliania huxleyi" 72 : 5500-5511, 2006

      19 Mackinder, L., "Expression of biomineralization-related ion transport genes in Emiliania huxleyi" 13 : 3250-3265, 2011

      20 Wahlund, T. M., "Expressed sequence tag profiles from calcifying and non-calcifying cultures of Emiliania huxleyi" 50 : 145-155, 2004

      21 Trimborn, S., "Effect of varying calcium concentrations and light intensities on calcification and photosynthesis in Emiliania huxleyi" 52 : 2285-2293, 2007

      22 Fukuda, S.-Y., "Difference in physiological responses of growth, photosynthesis and calcification of the coccolithophore Emiliania huxleyi to acidification by acid and $CO_2$ enrichment" 121 : 299-309, 2014

      23 Guillard, R. R., "Culture of Marine Invertebrate Animals" Springer 29-60, 1975

      24 Satoh, M., "Cold stress stimulates intracellular calcification by the coccolithophore, Emiliania huxleyi (Haptophyceae) under phosphate-deficient conditions" 11 : 327-333, 2009

      25 Taylor, A. R., "Coccolithophore cell biology: chalking up progress" 9 : 283-310, 2017

      26 Westbroek, P., "Coccolith production (biomineralization) in the marine alga Emiliania huxleyi" 36 : 368-373, 1989

      27 Araie, H., "Characterization of the selenite uptake mechanism in the coccolithophore Emiliania huxleyi (Haptophyta)" 52 : 1204-1210, 2011

      28 Wahlund, T. M., "Analysis of expressed sequence tags from calcifying cells of marine coccolithophorid (Emiliania huxleyi)" 6 : 278-290, 2004

      29 Herfort, L., "Acquisition and use of bicarbonate by Emiliania huxleyi" 156 : 427-436, 2002

      30 Higgins, C. F., "ABC transporters: from microorganisms to man" 8 : 67-113, 1992

      31 Westbroek, P., "A model system approach to biological climate forcing: the example of Emiliania huxleyi" 8 : 27-46, 1993

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