RISS 학술연구정보서비스

검색
다국어 입력

http://chineseinput.net/에서 pinyin(병음)방식으로 중국어를 변환할 수 있습니다.

변환된 중국어를 복사하여 사용하시면 됩니다.

예시)
  • 中文 을 입력하시려면 zhongwen을 입력하시고 space를누르시면됩니다.
  • 北京 을 입력하시려면 beijing을 입력하시고 space를 누르시면 됩니다.
닫기
    인기검색어 순위 펼치기

    RISS 인기검색어

      KCI등재 SCIE SCOPUS

      A concise review of human brain methylome during aging and neurodegenerative diseases = A concise review of human brain methylome during aging and neurodegenerative diseases

      한글로보기

      https://www.riss.kr/link?id=A106435695

      • 0

        상세조회
      • 0

        다운로드
      서지정보 열기
      • 내보내기
      • 내책장담기
      • 공유하기
      • 오류접수

      부가정보

      다국어 초록 (Multilingual Abstract)

      DNA methylation at CpG sites is an essential epigenetic mark that regulates gene expression during mammalian development and diseases. Methylome refers to the entire set of methylation modifications present in the whole genome. Over the last several y...

      DNA methylation at CpG sites is an essential epigenetic mark that regulates gene expression during mammalian development and diseases. Methylome refers to the entire set of methylation modifications present in the whole genome. Over the last several years, an increasing number of reports on brain DNA methylome reported the association between aberrant methylation and the abnormalities in the expression of critical genes known to have critical roles during aging and neurodegenerative diseases. Consequently, the role of methylation in understanding neurodegenerative diseases has been under focus. This review outlines the current knowledge of the human brain DNA methylomes during aging and neurodegenerative diseases. We describe the differentially methylated genes from fetal stage to old age and their biological functions. Additionally, we summarize the key aspects and methylated genes identified from brain methylome studies on neurodegenerative diseases. The brain methylome studies could provide a basis for studying the functional aspects of neurodegenerative diseases. [BMB Reports 2019; 52(10): 577-588]

      더보기

      참고문헌 (Reference)

      1 Nan X, "Transcriptional repression by the methyl-CpG-binding protein MeCP2involves a histone deacetylase complex" 393 : 386-, 1998

      2 Walsh CP, "Transcription of IAP endogenous retroviruses is constrained by cytosine methylation" 20 : 116-, 1998

      3 Zhang L, "Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA" 8 : 328-, 2012

      4 Hotchkiss RD, "The quantitative separation of purines, pyrimidines, and nucleosides by paper chromatography" 175 : 315-332, 1948

      5 Kriaucionis S, "The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain" 324 : 929-930, 2009

      6 Lord J, "The epigenetic landscape of Alzheimer's disease" 17 : 1138-, 2014

      7 Horvath S, "The cerebellum ages slowly according to the epigenetic clock" 7 : 294-, 2015

      8 He YF, "Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA" 333 : 1303-1307, 2011

      9 Ito S, "Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine" 333 : 1300-1303, 2011

      10 Santiago M, "TET enzymes and DNA hydroxymethylation in neural development and function—how critical are they?" 104 : 334-340, 2014

      1 Nan X, "Transcriptional repression by the methyl-CpG-binding protein MeCP2involves a histone deacetylase complex" 393 : 386-, 1998

      2 Walsh CP, "Transcription of IAP endogenous retroviruses is constrained by cytosine methylation" 20 : 116-, 1998

      3 Zhang L, "Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA" 8 : 328-, 2012

      4 Hotchkiss RD, "The quantitative separation of purines, pyrimidines, and nucleosides by paper chromatography" 175 : 315-332, 1948

      5 Kriaucionis S, "The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain" 324 : 929-930, 2009

      6 Lord J, "The epigenetic landscape of Alzheimer's disease" 17 : 1138-, 2014

      7 Horvath S, "The cerebellum ages slowly according to the epigenetic clock" 7 : 294-, 2015

      8 He YF, "Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA" 333 : 1303-1307, 2011

      9 Ito S, "Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine" 333 : 1300-1303, 2011

      10 Santiago M, "TET enzymes and DNA hydroxymethylation in neural development and function—how critical are they?" 104 : 334-340, 2014

      11 배재열, "Synapses in neurodegenerative diseases" 생화학분자생물학회 50 (50): 237-246, 2017

      12 Gruenbaum Y, "Substrate and sequence specificity of a eukaryotic DNA methylase" 295 : 620-, 1982

      13 Ito S, "Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification" 466 : 1129-, 2010

      14 Bhutani N, "Reprogramming towards pluripotency requires AID-dependent DNA demethylation" 463 : 1042-, 2010

      15 Boyes J, "Repression of genes by DNA methylation depends on CpG density and promoter strength : evidence for involvement of a methyl‐CpG binding protein" 11 : 327-333, 1992

      16 Wyatt G, "Recognition and estimation of 5-methylcytosine in nucleic acids" 48 : 581-, 1951

      17 Sanchez‐Mut JV, "Promoter hypermethylation of the phosphatase DUSP22 mediates PKA‐dependent TAU phosphorylation and CREB activation in Alzheimer's disease" 24 : 363-368, 2014

      18 Kalia LV, "Parkinson's disease" 386 : 896-912, 2015

      19 Swain JL, "Parental legacy determines methylation and expression of an autosomal transgene : a molecular mechanism for parental imprinting" 50 : 719-727, 1987

      20 Illingworth RS, "Orphan CpG islands identify numerous conserved promoters in the mammalian genome" 6 : e1001134-, 2010

      21 Delgado-Morales R, "Opening up the DNA methylome of dementia" 22 : 485-, 2017

      22 Antequera F, "Number of CpG islands and genes in human and mouse" 90 : 11995-11999, 1993

      23 Lindberg RL, "Multiple sclerosis as a generalized CNS disease—comparative microarray analysis of normal appearing white matter and lesions in secondary progressive MS" 152 : 154-167, 2004

      24 Faguy K, "Multiple sclerosis : An update" 87 : 529-550, 2016

      25 Spiers H, "Methylomic trajectories across human fetal brain development" 25 : 338-352, 2015

      26 Lunnon K, "Methylomic profiling implicates cortical deregulation of ANK1 in Alzheimer's disease" 17 : 1164-, 2014

      27 Gartler SM, "Mammalian X-chromosome inactivation" 17 : 155-190, 1983

      28 Nalls MA, "Large-scale meta-analysis of genome-wide association data identifies six new risk loci for Parkinson's disease" 46 : 989-, 2014

      29 Ioshikhes IP, "Large-scale human promoter mapping using CpG islands" 26 : 61-, 2000

      30 Galpern WR, "Interface between tauopathies and synucleinopathies : a tale of two proteins" 59 : 449-458, 2006

      31 Consortium IHGS, "Initial sequencing and analysis of the human genome" 409 : 860-, 2001

      32 Mastronardi FG, "Increased citrullination of histone H3 in multiple sclerosis brain and animal models of demyelination : a role for tumor necrosis factor-induced peptidylarginine deiminase 4 translocation" 26 : 11387-11396, 2006

      33 Villar-Menéndez I, "Increased 5-methylcytosine and decreased 5-hydroxymethylcytosine levels are associated with reduced striatal A 2A R levels in Huntington’s disease" 15 : 295-309, 2013

      34 Xi Z, "Hypermethylation of the CpG-island near the C9orf72 G4C2-repeat expansion in FTLD patients" 23 : 5630-5637, 2014

      35 Russ J, "Hypermethylation of repeat expanded C9orf72 is a clinical and molecular disease modifier" 129 : 39-52, 2015

      36 McColgan P, "Huntington's disease : a clinical review" 25 : 24-34, 2018

      37 Bates GP, "Huntington disease" 1 : 15005-, 2015

      38 Sanchez-Mut JV, "Human DNA methylomes of neurodegenerative diseases show common epigenomic patterns" 6 : e718-, 2016

      39 Lister R, "Human DNA methylomes at base resolution show widespread epigenomic differences" 462 : 315-, 2009

      40 Lister R, "Global epigenomic reconfiguration during mammalian brain development" 341 : 1237905-, 2013

      41 Reik W, "Genomic imprinting determines methylation of parental alleles in transgenic mice" 328 : 248-, 1987

      42 Hannum G, "Genome-wide methylation profiles reveal quantitative views of human aging rates" 49 : 359-367, 2013

      43 Bakulski KM, "Genome-wide DNA methylation differences between late-onset Alzheimer's disease and cognitively normal controls in human frontal cortex" 29 : 571-588, 2012

      44 Kaut O, "Genome-scale methylation analysis of Parkinson's disease patients'brains reveals DNA hypomethylation and increased mRNA expression of cytochrome P450 2E1" 13 : 87-91, 2012

      45 van Eijk KR, "Genetic analysis of DNA methylation and gene expression levels in whole blood of healthy human subjects" 13 : 636-, 2012

      46 Giri M, "Genes associated with Alzheimer’s disease : an overview and current status" 11 : 665-, 2016

      47 Davies MN, "Functional annotation of the human brain methylome identifies tissue-specific epigenetic variation across brain and blood" 13 : R43-, 2012

      48 Huynh JL, "Epigenome-wide differences in pathology-free regions of multiple sclerosis–affected brains" 17 : 121-, 2014

      49 Rao J, "Epigenetic modifications in frontal cortex from Alzheimer's disease and bipolar disorder patients" 2 : e132-, 2012

      50 Portela A, "Epigenetic modifications and human disease" 28 : 1057-, 2010

      51 Levine ME, "Epigenetic age of the pre-frontal cortex is associated with neuritic plaques, amyloid load, and Alzheimer’s disease related cognitive functioning" 7 : 1198-, 2015

      52 Laurent L, "Dynamic changes in the human methylome during differentiation" 20 : 320-331, 2010

      53 Feng J, "Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons" 13 : 423-, 2010

      54 Guo JU, "Distribution, recognition and regulation of non-CpG methylation in the adult mammalian brain" 17 : 215-, 2014

      55 Masliah E, "Distinctive patterns of DNA methylation associated with Parkinson disease : identification of concordant epigenetic changes in brain and peripheral blood leukocytes" 8 : 1030-1038, 2013

      56 Heyn H, "Distinct DNA methylomes of newborns and centenarians" 109 : 10522-10527, 2012

      57 Hernandez DG, "Distinct DNA methylation changes highly correlated with chronological age in the human brain" 20 : 1164-1172, 2011

      58 Day K, "Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape" 14 : R102-, 2013

      59 Hsieh CL, "Dependence of transcriptional repression on CpG methylation density" 14 : 5487-5494, 1994

      60 Jähner D, "De novo methylation and expression of retroviral genomes during mouse embryogenesis" 298 : 623-, 1982

      61 Veldic M, "DNAmethyltransferase 1 mRNA is selectively overexpressed in telencephalic GABAergic interneurons of schizophrenia brains" 101 : 348-353, 2004

      62 Okano M, "DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development" 99 : 247-257, 1999

      63 Horvath S, "DNA methylation-based biomarkers and the epigenetic clock theory of ageing" 19 : 371-, 2018

      64 정상은, "DNA methylation-based age prediction from various tissues and body fluids" 생화학분자생물학회 50 (50): 546-553, 2017

      65 Ladd-Acosta C, "DNA methylation signatures within the human brain" 81 : 1304-1315, 2007

      66 Numata S, "DNA methylation signatures in development and aging of the human prefrontal cortex" 90 : 260-272, 2012

      67 De Souza RA, "DNA methylation profiling in human Huntington's disease brain" 25 : 2013-2030, 2016

      68 Sanchez-Mut JV, "DNA methylation map of mouse and human brain identifies target genes in Alzheimer’s disease" 136 : 3018-3027, 2013

      69 Siegmund KD, "DNA methylation in the human cerebral cortex is dynamically regulated throughout the life span and involves differentiated neurons" 2 : e895-, 2007

      70 Heyward FD, "DNA methylation in memory formation : emerging insights" 21 : 475-489, 2015

      71 Bird AP, "DNA methylation and the frequency of CpG in animal DNA" 8 : 1499-1504, 1980

      72 Day JJ, "DNA methylation and memory formation" 13 : 1319-, 2010

      73 Horvath S, "DNA methylation age of human tissues and cell types" 14 : 3156-, 2013

      74 Rai K, "DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45" 135 : 1201-1212, 2008

      75 Bhutani N, "DNA demethylation dynamics" 146 : 866-872, 2011

      76 Tahiliani M, "Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1" 324 : 930-935, 2009

      77 Ling SC, "Converging mechanisms in ALS and FTD : disrupted RNA and protein homeostasis" 79 : 416-438, 2013

      78 Domcke S, "Competition between DNA methylation and transcription factors determines binding of NRF1" 528 : 575-, 2015

      79 Dawlaty MM, "Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development" 24 : 310-323, 2013

      80 Pedre X, "Changed histone acetylation patterns in normal-appearing white matter and early multiple sclerosis lesions" 31 : 3435-3445, 2011

      81 Liu EY, "C9orf72 hypermethylation protects against repeat expansion-associated pathology in ALS/FTD" 128 : 525-541, 2014

      82 Hermann A, "Biochemistry and biology of mammalian DNA methyltransferases" 61 : 2571-2587, 2004

      83 Yu M, "Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome" 149 : 1368-1380, 2012

      84 Cho S, "Association of miR-938G> A polymorphisms with primary ovarian insufficiency(POI)-related gene expression" 18 : 1255-, 2017

      85 Yu L, "Association of Brain DNA methylation in SORL1, ABCA7, HLA-DRB5, SLC24A4, and BIN1 with pathological diagnosis of Alzheimer disease" 72 : 15-24, 2015

      86 Lippa CF, "Antibodies to α‐synuclein detect Lewy bodies in many Down's syndrome brains with Alzheimer's disease" 45 : 353-357, 1999

      87 Levine ME, "An epigenetic biomarker of aging for lifespan and healthspan" 10 : 573-, 2018

      88 Chibnik LB, "Alzheimer's loci : epigenetic associations and interaction with genetic factors" 2 : 636-647, 2015

      89 De Jager PL, "Alzheimer's disease : early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci" 17 : 1156-, 2014

      90 Counts JL, "Alterations in DNA methylation may play a variety of roles in carcinogenesis" 83 : 13-15, 1995

      91 Horvath S, "Aging effects on DNA methylation modules in human brain and blood tissue" 13 : R97-, 2012

      92 Trinh J, "Advances in the genetics of Parkinson disease" 9 : 445-, 2013

      93 Gibbs JR, "Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain" 6 : e1000952-, 2010

      94 Belzil VV, "ALS and FTD : an epigenetic perspective" 132 : 487-502, 2016

      95 Consortium IPsDG, "A two-stage meta-analysis identifies several new loci for Parkinson's disease" 7 : e1002142-, 2011

      96 Illingworth R, "A novel CpG island set identifies tissue-specific methylation at developmental gene loci" 6 : e22-, 2008

      97 Rauch TA, "A human B cell methylome at 100− base pair resolution" 106 : 671-678, 2009

      98 Saxonov S, "A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters" 103 : 1412-1417, 2006

      더보기

      동일학술지(권/호) 다른 논문

      동일학술지 더보기

      더보기

      분석정보

      View

      상세정보조회

      0

      Usage

      원문다운로드

      0

      대출신청

      0

      복사신청

      0

      EDDS신청

      0

      동일 주제 내 활용도 TOP

      더보기

      주제

      연도별 연구동향

      연도별 활용동향

      연관논문

      연구자 네트워크맵

      공동연구자 (7)

      유사연구자 (20) 활용도상위20명

      인용정보 인용지수 설명보기

      학술지 이력

      학술지 이력
      연월일 이력구분 이력상세 등재구분
      학술지등록 한글명 : BMB reports
      외국어명 : BMB reports
      2024 평가예정 해외DB학술지평가 신청대상 (해외등재 학술지 평가)
      2021-01-01 평가 등재학술지 선정 (해외등재 학술지 평가) KCI등재
      2020-12-01 평가 등재후보로 하락 (해외등재 학술지 평가) KCI등재후보
      2013-07-17 학술지명변경 한글명 : BMB reports -> BMB Reports
      외국어명 : BMB reports -> BMB Reports
      KCI등재
      2011-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2009-09-21 학회명변경 한글명 : 대한생화학ㆍ분자생물학회 -> 생화학분자생물학회
      영문명 : Korean Society Of Medical Biochemistry And Molecular Biology -> Korean Society Of Biochemistry And Molecular Biology
      KCI등재
      2009-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2007-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2005-01-01 평가 등재학술지 유지 (등재유지) KCI등재
      2002-01-01 평가 등재학술지 선정 (등재후보2차) KCI등재
      1999-07-01 평가 등재후보학술지 선정 (신규평가) KCI등재후보
      더보기

      학술지 인용정보

      학술지 인용정보
      기준연도 WOS-KCI 통합IF(2년) KCIF(2년) KCIF(3년)
      2016 2.76 0.5 1.94
      KCIF(4년) KCIF(5년) 중심성지수(3년) 즉시성지수
      1.45 1.12 0.646 0.12
      더보기

      이 자료와 함께 이용한 RISS 자료

      나만을 위한 추천자료

      해외이동버튼