Phylogenic Study of Genus Phyllostachys (Phyllostachys) in Korea by Internal Transcribed Spacer Sequence (ITS)

Song Jin Lee(이송진),Man Kyu Huh(허만규),Hong Wook Huh(허홍욱),Byeong Ryong Lee(이병룡) 한국생명과학회 2011 생명과학회지 Vol.21 No.9

왕대속은 벼과 또는 화본과에 속하는 다년생 목본성 초본이며 아시아의 인도와 중국에 많은 종이 주로 분포한다. 식물에서 속간 속내 계통관계 추론을 위해 널리 이용되고 있는 ITS 부위가 있다. 이 속에 속하는 우리나라 자생 식물 왕대 속내 네 식물종 간 계통 관계를 평가하기 위해 핵 게놈의 ITS 부위로 평가하였다. DNA 서열배당은 많은 갭(gaps)을 가지고 있었다. 이 속 내 서열 변이는 일부 삽입과 결실이 발견되었고 속내 종간 변이는 자연도태에 의한 것으로 밝혀졌다. 이 속의 오죽과 분죽은 세 계통도(MP, ML, and NJ)에서 모두 같은 분지군을 형성하여 가장 근연관계에 있었다. 기존의 형태학적 특성과 단순 반복 서열(ISSR)의 결과와 유사한 계통 관계를 나타내어 왕대속에서 ITS의 서열이 이들 분류군에 매우 유익한 정보를 제공하고 있음을 시사하였다. Phyllostachys consists of high and fast growing trees and is a genus in the family Gramineae. The genus has many species in Asia, with main distribution being in India and China. One of the most popular sequences for phylogenetic inference at the generic and infrageneric levels in plants is the internal transcribed spacer (ITS) region of the 18S-5.8S-26S nuclear ribosomal cistron. We evaluated four taxa with the ITS region to estimate phenotypic relationships within the genus Phyllostachys in Korea. Alignment of the DNA sequences required the addition of numerous gaps. Sequence variation within the Phyllostachys was mostly due to natural selection, although several indels and inserts were found. Within the genus Phyllostachys, P. nigra and P. nigra var. henonis were the relatives in the three phylogenetic analyses (MP, ML, and NJ). However, some external nodes were poorly supported. Morphological traits and simple repeats (ISSR) represented the result of a relationship similar to the that of ITS sequences in the genus Phyllostachys. This suggests that ITS sequences are very informative for identification of these taxa.

Genetic Diversity and Phylogenetic Relationship of Genus Phyllostachys by RAPD Markers

Song Jin Lee(이송진),Man Kyu Huh(허만규),Hyun Cheol Shin(신현철),Hong Wook Huh(허홍욱) 한국생명과학회 2010 생명과학회지 Vol.20 No.6

왕대속 대나무들은 대부분 동남아시아에 분포한다. 전세계적으로 왕대속에 속하는 4종은 의학적, 생태학적으로 중요시 되어 왔다. 이번 연구에서 우리나라에 자생하고 있는 왕대속 4종을 RAPD마커를 이용하여 유전적 관계 분석하였다. RAPD분석결과 왕대속에 속하는 4종의 대나무는 명확하게 분류가 되었고 8.9~33.3%로 다형현상이 나타났다. 특히 왕대는 다른 종들 보다 유전적 다양성이 0.018로 가장 낮게 나왔다. 그리고 집단 내 유전적 다양성(Hs)은 0.315, 집단간 다양성(Gst)은 0.659 그리고 유전자 유동(Nm)은 0.0263로 나타났다. 이는 한국의 왕대속 집단은 지리적 및 환경적 요인을 받아 유전적 다양성이 낮게 나타났으며 본 연구는 대나무 유전적 다양성 연구에 중요한 기초자료가 될 것으로 사료된다. Genus Phyllostachys is a long-lived woody species primarily distributed throughout South East Asia. Many species of this genus has been regarded as medically and ecologically important in the world. We evaluated representative samples of the four taxa with RAPD to estimate genetic relationships within the genus Phyllostachys. The percentages of polymorphic loci were 8.9-33.3% at the species level. P. bambusoides was found to show lower genetic diversity (H=0.018) than other species. Total genetic diversity (HT) was 0.315, genetic diversity within populations (HS) was 0.043, the proportion of total genetic diversity partitioned among populations (GST) was 0.659 and the gene flow (Nm) was 0.0263. As some Korean populations were isolated and patchily distributed, they exhibited low levels of genetic diversity. The four taxa of the genus Phyllostachys analyzed were distinctly related to a monophyletic. P. nigra var. henonis. Stapf was found to be more closely related to P. pubescens than to P. nigra. P. bambusoides was quite distinct from the remaining species.

Genetic Diversity and Phylogenetic Relationship of Genus Phyllostachys by ISSR Markers

Song Jin Lee(이송진),Man Kyu Huh(허만규),Hong Wook Huh(허홍욱) 한국생명과학회 2007 생명과학회지 Vol.17 No.11

ISSR분자 마커를 이용하여 왕대속 대나무의 유연관계를 분석 실시하였다. 전세계적으로 왕대속에 속하는 4종은 경제학적, 생태학적으로 중요한 식물 자원중 하나이다. 총 11개의 ISSR 프라이머 중 9개의 프라이머에서 증폭이 일어 났으며 총 64개의 밴드를 확인 할 수 있었다. ISSR분석결과 왕대속 4종의 대나무에서 70.49%인 43개의 다형현상이 나타났다. 4개의 분류군으로 분류된 왕대속 대나무의 집단내 다양성(Hs)은 0.092, 집단간 다양성(Gst)은 0.499로 나타났다. 각 종에 대한 유전자 유동(Nm)은 0.559로 나타났다. 따라서 왕대속에 속하는 4종의 유전자 유동(Nm)은 아주 낮음을 알 수 있었다. 4종의 분류군에 대한 유전자 다양성(Ht)은 0.291로 낮게 나타났으며 ISSR 마커로 명확하게 그들은 분류가 되었다. 또한 왕대속의 4종은 단일계통임을 확인할 수 있었다. Four taxa of the genus Phyllostachys were analysed with PCR-based molecular inter-simple sequence repeat (ISSR) determine markers to determine their phylogenetic relationships. Many species of this genus are regarded as economical and ecologically important in the world. With the nine primers screened, ISSR assay generated a total of 64 reproducible bands. Analysis of ISSR from individual plants of genus Phyllostachys resulted in 43 polymorphic bands with 70.49%. When species were grouped by four taxa, within group diversity was 0.092 (Hs), while among group diversity was 0.499 (Gst) on a per locus basis. The estimated gene flow (Nm) between the pairs of species was 0.559. Hence, we can expect weak or low gene flow among species. Total mean genetic diversity (HT) for four taxa was 0.291. The ISSR data allowed us to resolve well-supported clades in the genus Phyllostachys. The four taxa of the genus Phyllostachys analyzed were distinctly related to a monophyletic.

식물성 항염증제의 개발 : 인동추출물에 대한 항염증 및 진통작용 비교

이송진(Song Jin Lee),손건호(Kun Ho Son),장현욱(Hyeun Wook Chang),강삼식(Sam Sik Kang),박병욱(Pyeong-uk Park),곽의종(Wie-jong Kawk),한창균(Chang-kyun Han),김현표(Hyun Pyo Kim) 한국생약학회 1995 생약학회지 Vol.25 No.4

For developing plant anti-inflammatory agents, extracts from Lonicera japonica were obtained and evaluated for their anti-inflammatory and analgesic activities using acute/chronic inflammatory models and writhing tests. It was found that the extracts with a modified extraction method showed higher anti-inflammatory and analgesic activities than those of the extracts based on the ancient literatures.

Dietary Exposure to Transgenic Rice Expressing the Spider Silk Protein Fibroin Reduces Blood Glucose Levels in Diabetic Mice: The Potential Role of Insulin Receptor Substrate-1 Phosphorylation in Adipocytes

박지은,정연재,박준범,김혜영,유영현,이광식,양원태,김도훈,김종민 한국발생생물학회 2019 발생과 생식 Vol.23 No.3

Type 2 diabetes mellitus (T2DM) is characterized by insulin resistance (IR). T2DM is correlated with obesity and most T2DM medications have been developed for enhancing insulin sensitivity. Silk protein fibroin (SPF) from spiders has been suggested as an attractive biomaterial for medical purposes. We generated transgenic rice (TR) expressing SPF and fed it to diabetic BKS.Cg-m+/+Leprdb mice to monitor the changes in blood glucose levels and adipose tissue proteins associated with energy metabolism and insulin signaling. In the present study, the adipocyte size in abdominal fat in TR-SPF-fed mice was remarkably smaller than that of the control. Whereas the adenosine monophosphate-activated protein kinase (AMPK)-activated protein kinase and insulin receptor substrate 1 (IRS1) protein levels were increased in abdominal adipose tissues after TR-SPF feeding, levels of six-transmembrane protein of prostate 2 (STAMP2) proteins decreased. Phosphorylation of AMPK at threonine 172 and IRS1 at serine 307 and tyrosine 632 were both increased in adipose tissues from TR-SPFfed mice. Increased expression and phosphorylation of IRS1 at both serine 307 and tyrosine 632 in adipose tissues indicated that adipocytes obtained from abdominal fat in TR-SPF-fed mice were more susceptible to insulin signaling than that of the control. STAMP2 protein levels decreased in adipose tissues from TR-SPF-fed mice, indicating that STAMP2 proteins were reducing adipocytes that were undergoing lipolysis. Taken together, this study showed that TR-SPF was effective in reducing blood glucose levels in diabetic mice and that concurrent lipolysis in abdominal adipocytes was associated with alterations of AMPK, IRS1, and STAMP2. Increased IRS1 expression and its phosphorylation by TR-SFP were considered to be particularly important in the induction of lipolysis in adipocytes, as well as in reducing blood glucose levels in this animal model.

[논문]부산시 영도의 세 지역내 식물 집단 구조

허홍욱,이송진,최금자,허만규 부산대학교 환경문제연구소 2004 環境硏究報 Vol.22 No.-

Plant Population Structure of three areas in Young-do of Busan

대학생들의 환경문제 의식에 관한 연구

허만규,이송진,허홍욱 한국환경과학회 2003 한국환경과학회지 Vol.12 No.3

This study was attempted to analyze sophomores' consciousness for environmental problems. In order to achieve this purpose, a method of questionnaire was administered to total 387 students selected from four universities in Busan. There were surveyed questions as follows, the conception of environmental problems, the condition of dwelling place and surrounding of home, the problems of environmental pollution, knowledge and concern for environmental problems, necessity of environmental education of school, and the environmental policy in Korea. Most students responded that the most serious environmental problem is water pollution. Most respondents have recognition the necessity of schooling for environmental education, whereas current-contents of environmental education are not enough to modify students' attitude and behavior.

Anti-inflammatory Activity of the Major Constituents of Lonicera japonica

Lee, Song Jin,Shin, Eun Joo,Son, Kun Ho,Chang, Hyeun Wook,Kang, Sam Sik,Kim, Hyun Pyo 영남대학교 약품개발연구소 1995 영남대학교 약품개발연구소 연구업적집 Vol.5 No.-

Previously, we reported that the n-butanol fraction of Lonicera japonica showed anti-inflammatrory activity in mice and rats. Several constituents such as loniceroside A and B, flavonoids and iridoids were isolated from this fraction. In this investigation, the anti-inflammatory activity of the major constituents of L. japonica was studied. Loniceroside A, lonicerin and loganin showed anti-inflammatory activity comparable to aspirin.

Antiinflammatory Activity of Naturally Occuring Flavone and Flavonol Glycosides

Lee, Song Jin,Son, Kun Ho,Chang, Hyeun Wook,Do, Jea Chul,Jung, Keun Young,Kang, Sam Sik,Kim, Hyun Pyo 영남대학교 약품개발연구소 1993 영남대학교 약품개발연구소 연구업적집 Vol.3 No.-

Our previous report demonstrated that certain flavonoid aglycones such as apigenin (flavone), quercetin, morin (flavonols), and biochanin A (isoflavone) showed in vivo antiinflammatory activity via topical and oral routes of administration. As a continual study, the various flavonoid glycosides have been evaluated in mouse ear edema assay using archidonic acid or croton-oil as a inflammagen. Flavonoids were orally administered (2 mg/mouse) and ear edema inhibition was measured. Significant antiinflammatory activities were found especially in flavone and flavonol glycosides (15-29%, inhibition) although the flavonoid derivatives tested showed less antiinflammatory activity than hydrocortisone or indomethacin. Chalcone and flavanone derivatives were not significantly active. And in general, flavonol glycosides of kaempferol-type were found to have a higher oral antiinflammatory activity than that of flavonol glycosides of quercetin-type in mice.