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Jung-Pil Suh,Arvind Kumar,Mallikarjuna Swarmy,Eok-Keun Ahn,Young-Hwan Yoon,Young-Chan Cho,Myeong-Ki Kim,Chung-Kon Kim 한국육종학회 2012 한국육종학회 심포지엄 Vol.2012 No.07
A set of nine Korean rice germplasm (KRG) along with the six indica lines were screened under irrigated non-stress and drought stress situations at IRRI in dry season (DS) 2011. The experiment received mild to moderate drought stress. Under irrigated situation, among all lines, IRRI119 yielded highest followed by PSBRc80 and PSBRc14. Among nine KRG, Hanareumbyeo yielded highest followed by Gayabyeo. Yield of Hanareumbyeo was similar to high yielding indica lines. Under drought, PSBRc14 provided the highest yield among indica lines and Hanarembyeo provided highest yield among nine KRG. Among nine KRG, Hanarembyeo provided the highest yield both under irrigated non-stress and drought stress situation. Parental polymorphism was performed with 125 SSR markers taking six KRG and three drought tolerant donors and polymorphic markers and japonica lines background specific markers were identified. The polymorphic markers in the region of three QTLs (DTY1.1, DTY2.2, DTY3.1) will be used for foreground genotyping for QTL introgression and background specific markers will be used for background genotyping. Sixteen rice germplasm could be separated into two main groups, japonica and indica groups by cluster analysis. The japonica and indica groups also classified as two subgroups, respectively. Based on results of screening of japonica lines under irrigated non-stress and drought stress situations, two KRG- Hanarembyeo and Jinmibyeo were selected for introgression of three QTLs (DTY1.1, DTY2.2 and DTY3.1) associated with grain yield under drought stress.
Field Performance and SSR Analysis of Drought QTL Introgression Lines of Rice
( Jung Pil Suh ),( Yong Jae Won ),( Eok Keun Ahn ),( Jeong Heui Lee ),( Woon Goo Ha ),( Myeong Ki Kim ),( Young Chan Cho ),( Eung Gi Jeong ),( Bo Kyeong Kim ) 한국육종학회 2014 Plant Breeding and Biotechnology Vol.2 No.2
A set of five Korean rice cultivars and seven drought-tolerant indica lines were screened under irrigated non-stress and drought-stressed conditions in the 2011 and 2012 dry seasons at IRRI, Philippines. The drought-stressed experiment received mild to moderate stress. Under drought stress, ‘IR86918-B-439-B’ had the highest grain yield among all tested lines and ‘Hanarembyeo’ had the highest grain yield among the five Korean rice cultivars. ‘IR86918-B-439-B’ also had the highest yield under irrigated non-stress conditions. The grain yield of ‘Hanareumbyeo’ was similar to ‘IR86918-B-439-B’ under non-stress conditions. SSR marker analysis was performed using 125 SSR markers for detection of polymorphic markers between the Korean rice cultivars and the drought-tolerant indica lines, and for genetic diversity analysis. Twelve polymorphic markers were identified in the region of three major drought QTLs (DTY1.1, DTY2.2, DTY3.1) in two of the Korean rice cultivars and three of the drought-tolerant lines. These polymorphic markers will be useful as foreground genotyping markers for drought-QTL introgression in Korean rice genetic backgrounds.
Jung Pil Suh,Young Chan Cho,Soo Jin Kwon,Im Soo Choi,Ha Chul Hong,Yeon Gyu Kim,Sang Nag Ahn,Hung Goo Hwang 한국육종학회 2006 한국육종학회지 Vol.38 No.2
A recombinant inbred lines (RILs) consisting of 231 lines, derived from a japonica (Suweon365) and a japonica (Chu-cheongbyeo) rice, was used to investigate the genetic factors affecting cooking and eating quality of rice. Alkali digestion valueloci (QTLs
Jung-Pil Suh,Jae-Hwan Roh,Young-Chan Cho,Seong-Sook Han,Yong-Hee Jeon,Kyung-Ho Kang,Yeon-Gyu Kim 한국육종학회 2008 한국육종학회지 Vol.40 No.3
Fifty-two Korean japonica rice cultivars were analyzed for leaf blast resistance and genotyped with 4 STS and 26 SSR markers flanking the specific chromosome sites linked with blast resistance genes. In our analysis of resistance genes in 52 japonica cultivars using STS markers tightly linked to Pib, Pita, Pi5(t) and Pi9(t), the blast nursery reaction of the cultivars possessing the each four major genes were not identical to that of the differential lines. Eight of the 26 SSR markers were associated with resistant phenotypes against the isolates of blast nursery as well as the specific Korean blast isolates, 90-008 (KI-1113), 03-177 (KJ-105). These markers were linked to Pit, Pish, Pib, Pi5(t), Piz, Pia, Pik, Pi18, Pita and Pi25(t) resistance gene loci. Three of the eight SSR markers, MRG5836, RM224 and RM7102 only showed significantly associated with the phenotypes of blast nursery test for two consecutive years. These three SSR markers also could distinguish between resistant and susceptible japonica cultivars. These results demonstrate the usefulness of marker-assisted selection and genotypic monitoring for blast resistance of rice in blast breeding programs.
Jung-Pil Suh,Sang-Nag Ahn,Young-Chan Cho,Kyong-Ho Kang,Im-Soo Choi,Yeon-Gyu Kim,Hak-Soo Suh,Hung-Goo Hwang 한국육종학회 2005 한국육종학회지 Vol.37 No.5
An interspecific BC3F2 population (Milyang 23/O. glaberrima/3*Milyang 23) consisting of 141 lines was evaluated for8 traits associated with yield. Oryza glaberrima (IRGC #103544) was phenotypically inferior to all of the traits examined in thisicle and grain yield. A genetic linkage map generated for this population consisted of 124 SSR markers with an average intervallength of 13.1 cM. The percentage of O. glaberrima genome, which was calculated on the number of the exotic gene introgres-sions contained in the 141 BC3F2 lines, ranged from 3.9 to 25.4% with a mean of 12.8%. Of the 37 QTLs associated with yield andyield components, 24 alleles from O. glaberrima were favorable. However, eight QTLs were significantly associated with yieldand five alleles of O. glaberrimafrom 1.5 to 2.2 tons/ha. Exploitation of the genetic potential of exotic species using molecular markers might provide a new oppor-tunity to improve yield and quantitative traits in rice breeding program.
( Jung Pil Suh ),( Young Chan Cho ),( Yong Jae Won ),( Eok Keun Ahn ),( Man Kee Baek ),( Myeong Ki Kim ),( Bo Kyeong Kim ),( Kshirod K. Jena ) 한국육종학회 2015 Plant Breeding and Biotechnology Vol.3 No.4
Advances in plant molecular techniques have dramatically widened the applicability of gene identification and pyramiding valuable genes. This study was carried out to pyramid five resistance genes for biotic stress into the japonica rice cultivar using marker-assisted selection (MAS) and marker-assisted background analysis of selected progenies using SSR markers. The Pi40, Xa4, xa5, Xa21 and Bph18 genes were combined in Jinbubyeo, a Korean japonica rice variety using MAS. Gene specific co-dominant PCR-based markers were used to select for homozygous recombinant lines in a segregating population derived from a cross between the parental homozygous resistant gene introgression lines. We had successfully developed multiple gene pyramided breeding lines (GPLs) for bacterial blight, blast, and brown planthopper using MAS in rice. The GPLs exhibited high resistance against biotic stress and had around 93% of the genetic background of the recurrent parent Jinbubyeo based on SSR graphical mapping. The yield and agronomic traits of the GPLs were similar to those of the recurrent parent, indicating that there is no apparent agronomic trait penalty associated with the presence of the resistance genes. The strategy of simultaneous foreground and phenotypic selection to introduce multiple R genes is very useful to reduce the cost and the time required for the isolation of desirable recombinants with target resistance genes in rice. The GPLs could be useful to enhance effective resistance for biotic stress and produce stable grain yield in japonica rice breeding programs.