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- 저자 : Zhenhong Wei (검색결과 5 건)
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The characteristic of the synonymous codon usage and phylogenetic analysis of hepatitis B virus
Xiaoming Qi,Chaojun Wei,Yonghong Li,Yu Wu,Hui Xu,Rui Guo,Yanjuan Jia,Zhenhao Li,Zhenhong Wei,Wanxia Wang,Jing Jia,Yuanting Li,Anqi Wang,Xiaoling Gao 한국유전학회 2020 Genes & Genomics Vol.42 No.7
Background Hepatitis B virus (HBV) infection is a crucial medical issue worldwide. The dependence of HBV replication on host cell machineries and their co-evolutionary interactions prompt the codon usage pattern of viral genes to translation selection and mutation pressure. Objective The evolutionary characteristics of HBV and the natural selection effects of the human genome on the codon usage characteristics were analyzed to provide a basis for medication development for HBV infection. Methods The codon usage pattern of sequences from different HBV genotypes of our isolates and reference HBV genome sequences downloaded from the National Center for Biotechnology Information (NCBI) database were analyzed by computing the relative synonymous codon usage (RSCU), nucleotide content, codon adaptation index (CAI) and the effective number of codons (ENC). Results The highest ENC values were observed in the C genotypes, followed by the B genotypes. The ENC values indicated a weak codon usage bias (CUB) in HBV genome. The number of codons differentially used between the three genotypes was markedly higher than that of similarly used codons. High CAI values indicated a good adaptability of HBV to its host. The ENC plot indicated the occurrence of mutational pressure in the three genotypes. The mean Ka/Ks ratios in the three genotypes were lower than 1, which indicated a negative selection pressure. The CAI and GC3% plot indicated the existence of CUB in the HBV genome. Conclusions Nucleotide composition, mutation bias, negative selection and mutational pressure are key factors influencing the CUB and phylogenetic diversity in HBV genotypes. The data provided here could be useful for developing drugs for HBV infection.
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Manyuan Cai,Xiaogang Sun,Yanyan Nie,Wei Chen,Zhiwen Qiu,Long Chen,Zhenhong Liu,Hao Tang 성균관대학교(자연과학캠퍼스) 성균나노과학기술원 2017 NANO Vol.12 No.4
Pre-lithiated multiwalled carbon nanotube anode was prepared by internal short circuit approach (ISC) for 5 min, 30 min, 60 min and 120 min respectively. Lithium ion capacitors (LICs) were assembled by using pre-lithiated multiwalled carbon nanotubes as anodes and activated carbon (AC) as cathodes. The structure of multiwalled carbon nanotubes and electrodes were investigated by scanning electron microscopy (SEM) and transmission electron microscopy (TEM). The electrochemical performance of pre-lithiated multiwalled carbon nanotube electrodes and pristine carbon nanotube electrodes were tested by galvanostatic charge/discharge and electrochemical impedance. The results indicated that pre-lithiation carbon nanotubes greatly improved the charge/discharge performance of LICs. The energy density was four times than conventional electric double-layer capacitors (EDLCs) at the current density of 100 mA/g. The LICs achieved a specific capacitance of 59.3 F/g at the current density of 100 mA/g with 60 min pre-lithiatiation process. The maximum energy density and power density was 96Wh/kg and 4035W/kg, respectively. The energy density still remained about 89.0% after 1000 cycles. The LIC showed excellent supercapacitor performance.
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Jirui Wang,Yaxi Liu,Yan Wang,Zhenhong Chen,Shuai Dai,Wenguang Cao,George Fedak,Xiujing Lan,Yuming Wei,Dengcai Liu,Youliang Zheng 한국유전학회 2011 Genes & Genomics Vol.33 No.2
Pre-harvest sprouting (PHS) in bread wheat is a major abiotic constraint reducing yield and influencing the production of high quality grain. In China both spring and winter wheat regions are affected by PHS. Sichuan lies in southwest China,where the most of rainfall occurs during April to September when wheat is harvested. The present investigation was conducted to identify the allelic variability of Vp1, a gene that plays a role in maintenance and induction of dormancy,among Sichuan landraces and recent cultivars with different dormancy levels and to find potential sources of PHS resistance for breeding. Sichuan landrace and cultivar wheat accessions had a wide range of dormancy levels. The average germination index (GI) of Sichuan landrace accessions was 0.232, whereas at 0.674 it was much higher for cultivars. The different dormancy levels between landraces and cultivars indicated that pre-harvest sprouting resistance might have been neglected in recent Sichuan wheat breeding programs. The average GI of white grained accessions was higher than for red grained accessions. Particular Vp-1B gene fragments were specific in landraces or cultivars and in white or red grained accessions. The results indicated that Vp-1B markers could be used to distinguish cultivars and landraces. Significant relationships between certain Vp-1B allelesand GI of Sichuan wheat accessions were shown by Spearman’s rank correlation analysis.
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Three-Dimensional Porous Carbon Nanotube Papers as Current Collector and Buffer for SnO2 Anodes
Xiaogang Sun,Zhiwen Qiu,Long Chen,Manyuan Cai,Jie Wang,Xu Li,Wei Chen,Zhenhong Liu,Hao Tang 성균관대학교(자연과학캠퍼스) 성균나노과학기술원 2017 NANO Vol.12 No.11
A novel three-dimensional porous conductive papers have been successfully synthesized via a simple physical route. Multi-walled carbon nanotubes (MWCNTs)@SnO2 composite anode materials are embedded in porous conductive papers. The peculiar structure can accommodate the huge volume expansion of MWCNTs@SnO2 composite anode materials during charge–discharge process. The framework formed by MWCNTs and cellulose can greatly improve the strength, stability and flexibility of the electrode. In addition, the structure successfully prevent the aggregation of SnO2 nanoparticles and collapse of MWCNTs@SnO2 composite electrode, leading to the improvement in electrochemical utilization and stable cyclability. The samples were characterized by X-ray diffraction (XRD), field-emission scanning electron microscopy (FESEM) and transmission electron microscopy (TEM), respectively. The electrochemical properties and application were evaluated by galvanostatic discharge–charge testing and cycling voltammetry. As a result, the MWCNTs@SnO2 composite electrode showed excellent rate performance. The discharge capacity remains about 680mAh g -1 after 100 cycles at 200mA g -1, and even around 300mAh g -1 at 1000mA g -1.
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