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      저자 : Sujatha. T. Parvathy (검색결과 1 건)
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        Functional analysis of a cryptic promoter from Arabidopsis thaliana reveals bidirectionality

        Sujatha. T. Parvathy,R. Srinivasan 한국식물생명공학회 2016 Plant biotechnology reports Vol.10 No.4

        Cryptic promoter elements play a significant role in evolution of plant gene expression patterns and are prospective tools for creating gene expression systems in plants. In a previous report, a 452 bp promoter fragment designated as cryptic root-specific promoter (AY601849) was identified immediately upstream to T-DNA insertion, in the intergenic region between divergent genes SAHH1 and SHMT4, in T-DNA tagged mutant M57 of Arabidopsis thaliana. In silico analysis of 452 bp promoter revealed typical eukaryotic promoter architecture, presence of rootspecific motifs and other cis-regulatory motifs responsible for the spatial and temporal expression. GUS expression driven by 452 bp in M57 was developmentally as well as light-regulated. The AT-rich 452 bp promoter does not show homology to any known sequences. The 452 bp promoter was further proved cryptic and detailed molecular characterization of the promoter carried out through serial 50 and 30 deletion analysis, by cloning the promoter fragments upstream to promoter-less GUS vector. A 279 bp fragment obtained by deleting 173 bp from 50 end of 452 bp was capable of driving root-specific expression, similar to that of full-length promoter. Further, root tipspecific, root-specific and core-regulatory motifs for rootspecific expression were identified at positions 173–227, 251–323 and 408–452 bp, respectively, from the 50 end of 452 bp. The 452 bp promoter was equally functional in inverse orientation, hence bidirectional and symmetric. In heterologous systems, such as Brassica juncea and Oryza sativa, the promoter activity was not significant since GUS was not visually detected in transient assays.

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