Climate change, the emergence of fungicide-resistant pathogens, and increasing consumer concerns about food safety are driving a global shift from chemical fungicide–based disease management toward eco-friendly and sustainable biological control str...
Climate change, the emergence of fungicide-resistant pathogens, and increasing consumer concerns about food safety are driving a global shift from chemical fungicide–based disease management toward eco-friendly and sustainable biological control strategies. Within this context, the identification of effective microbial resources has become an important priority. In this study, eleven fungal isolates obtained from freshwater environments were screened for antifungal activity, leading to the preliminary selection of six strains with strong inhibitory effects. Their antifungal properties were further evaluated through volatile organic compounds (VOCs) and culture filtrates (CF). Among the tested isolates, Trichoderma flavipes FBCC-F1632 and Camarosporomyces flavigenus FBCC- F2832 consistently exhibited strongest inhibitory activity. Both strains effectively suppressed the growth of major plant pathogens, including the causal agents of pepper anthracnose, apple bitter rot, and apple valsa canker, not only on agar media but also in fruit and twig assays. In addition, soil application to pepper seedlings demonstrated clear plant growth–promoting effects. The production of plant growth–regulating substances and antimicrobial compounds was confirmed. Taken together, this study provides a comprehensive evaluation of the pathogen-inhibiting and growth-promoting potential of freshwater-derived fungi and highlights FBCC- F1632 and FBCC-F2832 as promising candidates for the development of sustainable biological control agents.